EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSMODG00000015151 (Gene tree)
Gene ID: 100018800
Gene Symbol: RBM28
Alias: FLJ10377
Full Name: RNA binding motif protein 28
Gene Type: protein_coding
Species: Monodelphis_domestica
Status: putative
Strand: Minus strand
Length: 44434 bases
Position: chr8:188214501-188258934
Accession: 100018800
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMODP00000018934	RRM_1	PF00076.22	1.9e-57	1	4
ENSMODP00000018934	RRM_1	PF00076.22	1.9e-57	2	4
ENSMODP00000018934	RRM_1	PF00076.22	1.9e-57	3	4
ENSMODP00000018934	RRM_1	PF00076.22	1.9e-57	4	4

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMODT00000019276	RBM28-201	5078	-	ENSMODP00000018934	761 (aa)	XP_001371879	F7CFR9

Gene Model

Click here to download ENSMODG00000015151's gene model file

Pathways

Pathway ID	Pathway Name	Source
mdo03008	Ribosome biogenesis in eukaryotes	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMODG00000015151's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMODG00000015151	RBM28	100	73.177	ENSG00000106344	RBM28	100	87.500	Homo_sapiens
ENSMODG00000015151	RBM28	57	55.251	ENSAPOG00000015512	rbm28	100	49.431	Acanthochromis_polyacanthus
ENSMODG00000015151	RBM28	97	83.146	ENSAMEG00000004776	RBM28	66	85.000	Ailuropoda_melanoleuca
ENSMODG00000015151	RBM28	55	53.396	ENSACIG00000023153	rbm28	99	50.844	Amphilophus_citrinellus
ENSMODG00000015151	RBM28	57	55.023	ENSAOCG00000000462	rbm28	100	50.584	Amphiprion_ocellaris
ENSMODG00000015151	RBM28	58	50.851	ENSATEG00000001672	rbm28	64	50.403	Anabas_testudineus
ENSMODG00000015151	RBM28	100	74.185	ENSANAG00000033922	RBM28	100	87.500	Aotus_nancymaae
ENSMODG00000015151	RBM28	100	48.424	ENSACLG00000025024	rbm28	100	48.920	Astatotilapia_calliptera
ENSMODG00000015151	RBM28	57	56.600	ENSAMXG00000000763	rbm28	99	58.581	Astyanax_mexicanus
ENSMODG00000015151	RBM28	100	73.263	ENSBTAG00000017001	RBM28	100	87.500	Bos_taurus
ENSMODG00000015151	RBM28	100	73.117	ENSCJAG00000017731	RBM28	100	87.500	Callithrix_jacchus
ENSMODG00000015151	RBM28	100	73.403	ENSCAFG00000001667	RBM28	100	72.026	Canis_familiaris
ENSMODG00000015151	RBM28	100	73.403	ENSCAFG00020021648	RBM28	100	72.026	Canis_lupus_dingo
ENSMODG00000015151	RBM28	100	72.906	ENSCHIG00000014146	RBM28	100	72.941	Capra_hircus
ENSMODG00000015151	RBM28	100	71.818	ENSTSYG00000002892	RBM28	100	71.632	Carlito_syrichta
ENSMODG00000015151	RBM28	83	53.846	ENSCAPG00000013218	RBM28	94	51.650	Cavia_aperea
ENSMODG00000015151	RBM28	100	71.503	ENSCPOG00000006253	RBM28	100	71.242	Cavia_porcellus
ENSMODG00000015151	RBM28	100	72.846	ENSCCAG00000035105	RBM28	100	87.500	Cebus_capucinus
ENSMODG00000015151	RBM28	99	72.324	ENSCATG00000040497	RBM28	100	85.000	Cercocebus_atys
ENSMODG00000015151	RBM28	100	67.624	ENSCLAG00000003707	RBM28	100	67.323	Chinchilla_lanigera
ENSMODG00000015151	RBM28	100	72.644	ENSCSAG00000010161	RBM28	100	72.382	Chlorocebus_sabaeus
ENSMODG00000015151	RBM28	57	78.906	ENSCHOG00000001994	-	63	78.125	Choloepus_hoffmanni
ENSMODG00000015151	RBM28	51	59.326	ENSCPBG00000018088	RBM28	83	59.551	Chrysemys_picta_bellii
ENSMODG00000015151	RBM28	90	73.208	ENSCANG00000038397	RBM28	100	87.500	Colobus_angolensis_palliatus
ENSMODG00000015151	RBM28	65	72.745	ENSCGRG00001021278	Rbm28	100	68.869	Cricetulus_griseus_chok1gshd
ENSMODG00000015151	RBM28	100	70.871	ENSCGRG00000005098	Rbm28	100	69.922	Cricetulus_griseus_crigri
ENSMODG00000015151	RBM28	100	48.917	ENSCSEG00000004212	rbm28	100	47.959	Cynoglossus_semilaevis
ENSMODG00000015151	RBM28	58	56.347	ENSCVAG00000010493	rbm28	61	54.852	Cyprinodon_variegatus
ENSMODG00000015151	RBM28	100	51.707	ENSDARG00000025332	rbm28	96	50.990	Danio_rerio
ENSMODG00000015151	RBM28	100	73.238	ENSDNOG00000001124	RBM28	100	73.037	Dasypus_novemcinctus
ENSMODG00000015151	RBM28	67	70.117	ENSDORG00000004184	Rbm28	92	73.673	Dipodomys_ordii
ENSMODG00000015151	RBM28	64	39.300	FBgn0260456	CG4806	67	39.712	Drosophila_melanogaster
ENSMODG00000015151	RBM28	100	64.875	ENSETEG00000007130	RBM28	99	64.967	Echinops_telfairi
ENSMODG00000015151	RBM28	85	46.544	ENSEBUG00000004419	rbm28	98	38.760	Eptatretus_burgeri
ENSMODG00000015151	RBM28	100	74.131	ENSEASG00005008528	RBM28	100	72.774	Equus_asinus_asinus
ENSMODG00000015151	RBM28	100	73.522	ENSECAG00000007745	RBM28	100	72.680	Equus_caballus
ENSMODG00000015151	RBM28	100	66.926	ENSEEUG00000002389	RBM28	100	65.766	Erinaceus_europaeus
ENSMODG00000015151	RBM28	100	53.797	ENSELUG00000020602	rbm28	100	52.971	Esox_lucius
ENSMODG00000015151	RBM28	100	73.072	ENSFCAG00000000946	RBM28	100	87.500	Felis_catus
ENSMODG00000015151	RBM28	100	72.178	ENSFDAG00000010169	RBM28	100	71.279	Fukomys_damarensis
ENSMODG00000015151	RBM28	57	51.370	ENSGMOG00000007091	rbm28	65	49.149	Gadus_morhua
ENSMODG00000015151	RBM28	58	56.798	ENSGAFG00000004802	rbm28	96	57.303	Gambusia_affinis
ENSMODG00000015151	RBM28	57	54.382	ENSGACG00000012612	rbm28	100	49.870	Gasterosteus_aculeatus
ENSMODG00000015151	RBM28	66	75.824	ENSGAGG00000008873	RBM28	87	71.220	Gopherus_agassizii
ENSMODG00000015151	RBM28	95	72.627	ENSGGOG00000004644	RBM28	97	71.488	Gorilla_gorilla
ENSMODG00000015151	RBM28	91	50.708	ENSHBUG00000009611	rbm28	94	50.706	Haplochromis_burtoni
ENSMODG00000015151	RBM28	100	72.157	ENSHGLG00000005409	RBM28	100	70.665	Heterocephalus_glaber_female
ENSMODG00000015151	RBM28	100	72.157	ENSHGLG00100016458	RBM28	100	70.588	Heterocephalus_glaber_male
ENSMODG00000015151	RBM28	82	48.205	ENSHCOG00000010597	rbm28	96	45.417	Hippocampus_comes
ENSMODG00000015151	RBM28	55	48.585	ENSIPUG00000007103	rbm28	89	45.708	Ictalurus_punctatus
ENSMODG00000015151	RBM28	100	71.835	ENSSTOG00000002169	RBM28	100	70.558	Ictidomys_tridecemlineatus
ENSMODG00000015151	RBM28	100	65.183	ENSJJAG00000022400	Rbm28	100	64.119	Jaculus_jaculus
ENSMODG00000015151	RBM28	58	52.079	ENSKMAG00000013348	rbm28	99	48.176	Kryptolebias_marmoratus
ENSMODG00000015151	RBM28	58	55.111	ENSLBEG00000012998	rbm28	100	50.702	Labrus_bergylta
ENSMODG00000015151	RBM28	74	56.969	ENSLACG00000010485	-	100	56.696	Latimeria_chalumnae
ENSMODG00000015151	RBM28	99	64.433	ENSLOCG00000015541	rbm28	80	64.433	Lepisosteus_oculatus
ENSMODG00000015151	RBM28	100	73.394	ENSLAFG00000010717	RBM28	100	72.215	Loxodonta_africana
ENSMODG00000015151	RBM28	99	72.585	ENSMFAG00000031036	RBM28	100	85.000	Macaca_fascicularis
ENSMODG00000015151	RBM28	99	72.229	ENSMMUG00000007250	RBM28	100	85.000	Macaca_mulatta
ENSMODG00000015151	RBM28	99	72.668	ENSMNEG00000036970	RBM28	100	85.000	Macaca_nemestrina
ENSMODG00000015151	RBM28	84	72.363	ENSMLEG00000037717	RBM28	100	71.941	Mandrillus_leucophaeus
ENSMODG00000015151	RBM28	100	51.546	ENSMAMG00000008525	rbm28	100	51.226	Mastacembelus_armatus
ENSMODG00000015151	RBM28	59	53.066	ENSMZEG00005019625	rbm28	100	48.093	Maylandia_zebra
ENSMODG00000015151	RBM28	100	69.532	ENSMAUG00000002263	Rbm28	100	67.893	Mesocricetus_auratus
ENSMODG00000015151	RBM28	93	71.409	ENSMICG00000000107	RBM28	100	69.093	Microcebus_murinus
ENSMODG00000015151	RBM28	100	71.782	ENSMOCG00000014615	Rbm28	100	70.000	Microtus_ochrogaster
ENSMODG00000015151	RBM28	57	54.253	ENSMMOG00000008600	rbm28	99	51.346	Mola_mola
ENSMODG00000015151	RBM28	58	52.550	ENSMALG00000006419	rbm28	61	50.913	Monopterus_albus
ENSMODG00000015151	RBM28	100	70.458	MGP_CAROLIEiJ_G0028162	Rbm28	100	69.241	Mus_caroli
ENSMODG00000015151	RBM28	100	70.926	ENSMUSG00000029701	Rbm28	100	68.791	Mus_musculus
ENSMODG00000015151	RBM28	100	70.964	MGP_PahariEiJ_G0021920	Rbm28	100	69.351	Mus_pahari
ENSMODG00000015151	RBM28	100	70.926	MGP_SPRETEiJ_G0029162	Rbm28	100	68.791	Mus_spretus
ENSMODG00000015151	RBM28	100	73.212	ENSMPUG00000006511	RBM28	100	71.932	Mustela_putorius_furo
ENSMODG00000015151	RBM28	100	72.150	ENSMLUG00000002186	RBM28	100	71.521	Myotis_lucifugus
ENSMODG00000015151	RBM28	100	69.241	ENSNGAG00000006480	-	100	67.360	Nannospalax_galili
ENSMODG00000015151	RBM28	100	68.325	ENSNGAG00000017946	-	100	66.623	Nannospalax_galili
ENSMODG00000015151	RBM28	100	72.078	ENSNLEG00000012307	RBM28	100	87.500	Nomascus_leucogenys
ENSMODG00000015151	RBM28	81	92.169	ENSMEUG00000009611	RBM28	91	89.759	Notamacropus_eugenii
ENSMODG00000015151	RBM28	90	68.431	ENSOPRG00000015140	RBM28	90	67.552	Ochotona_princeps
ENSMODG00000015151	RBM28	100	67.890	ENSODEG00000003213	-	100	66.928	Octodon_degus
ENSMODG00000015151	RBM28	75	78.772	ENSODEG00000013217	-	81	78.701	Octodon_degus
ENSMODG00000015151	RBM28	58	53.159	ENSONIG00000014924	rbm28	100	47.264	Oreochromis_niloticus
ENSMODG00000015151	RBM28	100	70.801	ENSOCUG00000003009	RBM28	100	70.207	Oryctolagus_cuniculus
ENSMODG00000015151	RBM28	58	55.804	ENSORLG00000009636	rbm28	99	48.934	Oryzias_latipes
ENSMODG00000015151	RBM28	58	55.705	ENSORLG00020002123	rbm28	88	49.852	Oryzias_latipes_hni
ENSMODG00000015151	RBM28	86	54.955	ENSORLG00015015030	rbm28	98	55.378	Oryzias_latipes_hsok
ENSMODG00000015151	RBM28	58	56.182	ENSOMEG00000007801	rbm28	64	53.579	Oryzias_melastigma
ENSMODG00000015151	RBM28	90	85.000	ENSOGAG00000006011	RBM28	100	85.000	Otolemur_garnettii
ENSMODG00000015151	RBM28	100	73.072	ENSOARG00000002547	RBM28	100	72.266	Ovis_aries
ENSMODG00000015151	RBM28	100	72.727	ENSPPAG00000041730	RBM28	100	87.500	Pan_paniscus
ENSMODG00000015151	RBM28	100	72.656	ENSPPRG00000004420	RBM28	100	87.500	Panthera_pardus
ENSMODG00000015151	RBM28	100	72.881	ENSPTIG00000008550	RBM28	100	87.500	Panthera_tigris_altaica
ENSMODG00000015151	RBM28	100	72.987	ENSPTRG00000019659	RBM28	100	87.500	Pan_troglodytes
ENSMODG00000015151	RBM28	99	72.229	ENSPANG00000022295	RBM28	100	85.000	Papio_anubis
ENSMODG00000015151	RBM28	99	50.428	ENSPKIG00000023453	rbm28	65	52.734	Paramormyrops_kingsleyae
ENSMODG00000015151	RBM28	84	57.674	ENSPMGG00000012840	rbm28	99	54.348	Periophthalmus_magnuspinnatus
ENSMODG00000015151	RBM28	100	69.622	ENSPEMG00000020673	Rbm28	100	67.670	Peromyscus_maniculatus_bairdii
ENSMODG00000015151	RBM28	100	88.598	ENSPCIG00000012810	RBM28	100	87.811	Phascolarctos_cinereus
ENSMODG00000015151	RBM28	58	57.080	ENSPFOG00000018209	rbm28	100	49.746	Poecilia_formosa
ENSMODG00000015151	RBM28	56	57.240	ENSPLAG00000016078	rbm28	60	54.507	Poecilia_latipinna
ENSMODG00000015151	RBM28	58	56.954	ENSPMEG00000004292	rbm28	100	49.682	Poecilia_mexicana
ENSMODG00000015151	RBM28	56	56.849	ENSPREG00000014287	rbm28	77	54.255	Poecilia_reticulata
ENSMODG00000015151	RBM28	100	73.037	ENSPPYG00000017975	RBM28	100	72.120	Pongo_abelii
ENSMODG00000015151	RBM28	74	68.539	ENSPCAG00000008223	RBM28	82	68.539	Procavia_capensis
ENSMODG00000015151	RBM28	90	87.500	ENSPCOG00000016797	RBM28	100	87.500	Propithecus_coquereli
ENSMODG00000015151	RBM28	77	86.385	ENSPVAG00000005443	RBM28	76	86.385	Pteropus_vampyrus
ENSMODG00000015151	RBM28	100	47.950	ENSPNYG00000014003	rbm28	64	50.806	Pundamilia_nyererei
ENSMODG00000015151	RBM28	100	69.804	ENSRNOG00000005468	Rbm28	100	69.531	Rattus_norvegicus
ENSMODG00000015151	RBM28	99	72.396	ENSRBIG00000033990	RBM28	100	87.500	Rhinopithecus_bieti
ENSMODG00000015151	RBM28	99	71.969	ENSRROG00000040747	RBM28	100	87.500	Rhinopithecus_roxellana
ENSMODG00000015151	RBM28	86	69.409	ENSSBOG00000012308	RBM28	100	68.734	Saimiri_boliviensis_boliviensis
ENSMODG00000015151	RBM28	96	80.408	ENSSHAG00000017017	RBM28	99	78.091	Sarcophilus_harrisii
ENSMODG00000015151	RBM28	55	60.187	ENSSFOG00015001231	rbm28	65	56.612	Scleropages_formosus
ENSMODG00000015151	RBM28	58	51.794	ENSSMAG00000003885	rbm28	97	49.683	Scophthalmus_maximus
ENSMODG00000015151	RBM28	58	54.867	ENSSDUG00000014270	rbm28	93	53.846	Seriola_dumerili
ENSMODG00000015151	RBM28	58	55.088	ENSSLDG00000020099	rbm28	62	54.054	Seriola_lalandi_dorsalis
ENSMODG00000015151	RBM28	76	79.648	ENSSARG00000008303	RBM28	80	79.337	Sorex_araneus
ENSMODG00000015151	RBM28	66	75.000	ENSSPUG00000000838	RBM28	78	75.000	Sphenodon_punctatus
ENSMODG00000015151	RBM28	100	74.708	ENSSSCG00000031847	RBM28	100	73.595	Sus_scrofa
ENSMODG00000015151	RBM28	58	53.982	ENSTRUG00000013311	rbm28	99	48.443	Takifugu_rubripes
ENSMODG00000015151	RBM28	99	50.515	ENSTNIG00000017962	rbm28	99	49.430	Tetraodon_nigroviridis
ENSMODG00000015151	RBM28	87	74.709	ENSTBEG00000012749	RBM28	86	74.709	Tupaia_belangeri
ENSMODG00000015151	RBM28	100	71.354	ENSTTRG00000013647	RBM28	100	71.317	Tursiops_truncatus
ENSMODG00000015151	RBM28	100	68.312	ENSUAMG00000006949	RBM28	100	67.405	Ursus_americanus
ENSMODG00000015151	RBM28	100	74.316	ENSUMAG00000005997	RBM28	100	73.168	Ursus_maritimus
ENSMODG00000015151	RBM28	84	67.852	ENSVPAG00000008304	RBM28	86	66.768	Vicugna_pacos
ENSMODG00000015151	RBM28	100	73.012	ENSVVUG00000007270	RBM28	100	71.634	Vulpes_vulpes
ENSMODG00000015151	RBM28	99	55.823	ENSXETG00000009271	rbm28	83	65.700	Xenopus_tropicalis
ENSMODG00000015151	RBM28	58	54.402	ENSXCOG00000020357	rbm28	99	52.610	Xiphophorus_couchianus
ENSMODG00000015151	RBM28	56	57.241	ENSXMAG00000004415	rbm28	98	50.129	Xiphophorus_maculatus