EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMODG00000015204 (Gene tree)
Gene ID: 100023525
Gene Symbol: -
Alias: -
Full Name: valyl-tRNA synthetase
Gene Type: protein_coding
Species: Monodelphis_domestica
Status: putative
Strand: Minus strand
Length: 17044 bases
Position: chr2:267939959-267957002
Accession: 100023525
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMODP00000018995	tRNA-synt_1g	PF09334.11	6.8e-11	1	1
ENSMODP00000018995	Anticodon_1	PF08264.13	7.2e-35	1	1
ENSMODP00000018995	tRNA-synt_1	PF00133.22	1.9e-203	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMODT00000019337	-	3795	XM_001368853	ENSMODP00000018995	1264 (aa)	XP_001368890	F7B9X7

Gene Model

Click here to download ENSMODG00000015204's gene model file

Pathways

Pathway ID	Pathway Name	Source
mdo00970	Aminoacyl-tRNA biosynthesis	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMODG00000015204's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMODG00000015204	-	75	52.366	ENSMODG00000015848	VARS2	91	50.905

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMODG00000015204	-	100	86.551	ENSG00000204394	VARS	100	86.551	Homo_sapiens
ENSMODG00000015204	-	98	64.659	ENSAPOG00000020691	vars	99	64.418	Acanthochromis_polyacanthus
ENSMODG00000015204	-	98	64.659	ENSAPOG00000020921	vars	99	64.418	Acanthochromis_polyacanthus
ENSMODG00000015204	-	100	86.087	ENSAMEG00000006417	VARS	100	86.087	Ailuropoda_melanoleuca
ENSMODG00000015204	-	100	65.725	ENSACIG00000013752	vars	100	65.804	Amphilophus_citrinellus
ENSMODG00000015204	-	100	64.534	ENSAOCG00000002447	vars	100	64.201	Amphiprion_ocellaris
ENSMODG00000015204	-	100	64.534	ENSAPEG00000010638	vars	99	65.187	Amphiprion_percula
ENSMODG00000015204	-	100	64.697	ENSATEG00000020219	vars	100	64.483	Anabas_testudineus
ENSMODG00000015204	-	90	70.338	ENSACAG00000029133	-	99	70.338	Anolis_carolinensis
ENSMODG00000015204	-	100	86.867	ENSANAG00000015453	VARS	100	86.867	Aotus_nancymaae
ENSMODG00000015204	-	100	65.116	ENSACLG00000025699	vars	97	65.194	Astatotilapia_calliptera
ENSMODG00000015204	-	94	66.305	ENSAMXG00000017716	vars	95	65.831	Astyanax_mexicanus
ENSMODG00000015204	-	100	86.788	ENSBTAG00000005631	VARS	100	86.788	Bos_taurus
ENSMODG00000015204	-	100	86.709	ENSCJAG00000002604	VARS	100	86.709	Callithrix_jacchus
ENSMODG00000015204	-	100	85.918	ENSCAFG00000000636	VARS	100	85.918	Canis_familiaris
ENSMODG00000015204	-	94	86.402	ENSCAFG00020020790	VARS	96	86.402	Canis_lupus_dingo
ENSMODG00000015204	-	100	86.788	ENSCHIG00000011008	VARS	100	86.788	Capra_hircus
ENSMODG00000015204	-	100	86.313	ENSTSYG00000001567	VARS	100	86.313	Carlito_syrichta
ENSMODG00000015204	-	95	80.782	ENSCAPG00000013736	VARS	99	84.775	Cavia_aperea
ENSMODG00000015204	-	100	85.364	ENSCPOG00000000870	VARS	100	85.364	Cavia_porcellus
ENSMODG00000015204	-	100	86.946	ENSCCAG00000035656	VARS	100	86.946	Cebus_capucinus
ENSMODG00000015204	-	100	86.788	ENSCATG00000022394	VARS	100	86.788	Cercocebus_atys
ENSMODG00000015204	-	90	81.826	ENSCLAG00000009470	VARS	95	81.826	Chinchilla_lanigera
ENSMODG00000015204	-	100	86.709	ENSCSAG00000008784	VARS	100	86.709	Chlorocebus_sabaeus
ENSMODG00000015204	-	77	73.922	ENSCPBG00000007943	VARS	96	73.922	Chrysemys_picta_bellii
ENSMODG00000015204	-	100	86.867	ENSCANG00000033570	VARS	100	86.867	Colobus_angolensis_palliatus
ENSMODG00000015204	-	100	85.443	ENSCGRG00001005686	Vars	100	85.443	Cricetulus_griseus_chok1gshd
ENSMODG00000015204	-	92	80.737	ENSCGRG00000013352	Vars	78	80.737	Cricetulus_griseus_crigri
ENSMODG00000015204	-	100	64.850	ENSCSEG00000019652	vars	100	64.664	Cynoglossus_semilaevis
ENSMODG00000015204	-	100	65.501	ENSCVAG00000022398	vars	100	65.659	Cyprinodon_variegatus
ENSMODG00000015204	-	100	65.012	ENSDARG00000044575	vars	100	65.163	Danio_rerio
ENSMODG00000015204	-	83	86.890	ENSDORG00000016433	Vars	94	86.890	Dipodomys_ordii
ENSMODG00000015204	-	69	82.459	ENSETEG00000003824	VARS	77	84.049	Echinops_telfairi
ENSMODG00000015204	-	50	71.920	ENSEBUG00000007086	vars	84	70.906	Eptatretus_burgeri
ENSMODG00000015204	-	57	63.462	ENSEBUG00000004637	vars	100	63.599	Eptatretus_burgeri
ENSMODG00000015204	-	100	87.184	ENSEASG00005015673	VARS	100	87.184	Equus_asinus_asinus
ENSMODG00000015204	-	100	86.640	ENSECAG00000014620	VARS	100	86.957	Equus_caballus
ENSMODG00000015204	-	78	85.577	ENSEEUG00000004116	VARS	80	85.577	Erinaceus_europaeus
ENSMODG00000015204	-	100	65.019	ENSELUG00000006550	vars	97	64.462	Esox_lucius
ENSMODG00000015204	-	100	86.472	ENSFCAG00000004510	VARS	100	86.472	Felis_catus
ENSMODG00000015204	-	85	83.744	ENSFDAG00000011401	VARS	100	83.744	Fukomys_damarensis
ENSMODG00000015204	-	100	65.423	ENSFHEG00000010672	vars	100	65.581	Fundulus_heteroclitus
ENSMODG00000015204	-	92	66.500	ENSGMOG00000014908	vars	97	66.750	Gadus_morhua
ENSMODG00000015204	-	100	65.759	ENSGAFG00000021630	vars	100	65.837	Gambusia_affinis
ENSMODG00000015204	-	92	66.359	ENSGACG00000009601	vars	97	66.527	Gasterosteus_aculeatus
ENSMODG00000015204	-	50	64.297	ENSGAGG00000006508	-	91	64.070	Gopherus_agassizii
ENSMODG00000015204	-	100	86.867	ENSGGOG00000011364	VARS	100	86.867	Gorilla_gorilla
ENSMODG00000015204	-	100	65.271	ENSHBUG00000017151	vars	97	65.349	Haplochromis_burtoni
ENSMODG00000015204	-	100	84.335	ENSHGLG00000011646	VARS	100	84.335	Heterocephalus_glaber_female
ENSMODG00000015204	-	93	77.492	ENSHGLG00100018062	VARS	99	77.444	Heterocephalus_glaber_male
ENSMODG00000015204	-	99	64.534	ENSHCOG00000012198	vars	99	65.160	Hippocampus_comes
ENSMODG00000015204	-	100	65.603	ENSIPUG00000005218	vars	100	65.603	Ictalurus_punctatus
ENSMODG00000015204	-	100	86.482	ENSSTOG00000013112	VARS	100	86.482	Ictidomys_tridecemlineatus
ENSMODG00000015204	-	100	83.782	ENSJJAG00000019749	-	100	83.782	Jaculus_jaculus
ENSMODG00000015204	-	100	66.535	ENSJJAG00000015343	-	98	69.659	Jaculus_jaculus
ENSMODG00000015204	-	100	65.719	ENSKMAG00000009455	vars	100	65.166	Kryptolebias_marmoratus
ENSMODG00000015204	-	100	64.455	ENSLBEG00000010341	vars	100	64.218	Labrus_bergylta
ENSMODG00000015204	-	94	61.733	ENSLACG00000015232	VARS	99	62.306	Latimeria_chalumnae
ENSMODG00000015204	-	100	66.197	ENSLOCG00000004240	vars	100	66.484	Lepisosteus_oculatus
ENSMODG00000015204	-	100	85.839	ENSLAFG00000023090	VARS	100	86.313	Loxodonta_africana
ENSMODG00000015204	-	100	86.709	ENSMFAG00000001032	VARS	100	86.709	Macaca_fascicularis
ENSMODG00000015204	-	100	86.709	ENSMMUG00000006828	VARS	100	86.709	Macaca_mulatta
ENSMODG00000015204	-	100	86.709	ENSMNEG00000042072	VARS	100	86.709	Macaca_nemestrina
ENSMODG00000015204	-	100	86.788	ENSMLEG00000039307	VARS	100	86.788	Mandrillus_leucophaeus
ENSMODG00000015204	-	100	65.012	ENSMAMG00000003949	vars	100	65.367	Mastacembelus_armatus
ENSMODG00000015204	-	100	65.194	ENSMZEG00005018327	vars	100	64.590	Maylandia_zebra
ENSMODG00000015204	-	100	85.601	ENSMAUG00000006715	Vars	100	85.601	Mesocricetus_auratus
ENSMODG00000015204	-	100	86.788	ENSMICG00000003548	VARS	100	86.788	Microcebus_murinus
ENSMODG00000015204	-	100	82.911	ENSMOCG00000015404	Vars	100	83.070	Microtus_ochrogaster
ENSMODG00000015204	-	100	64.780	ENSMMOG00000015801	vars	100	64.623	Mola_mola
ENSMODG00000015204	-	99	64.831	ENSMALG00000022532	vars	99	64.988	Monopterus_albus
ENSMODG00000015204	-	100	85.680	MGP_CAROLIEiJ_G0021491	Vars	100	86.155	Mus_caroli
ENSMODG00000015204	-	100	85.680	ENSMUSG00000007029	Vars	100	86.155	Mus_musculus
ENSMODG00000015204	-	100	85.443	MGP_PahariEiJ_G0020486	Vars	100	85.918	Mus_pahari
ENSMODG00000015204	-	100	85.759	MGP_SPRETEiJ_G0022396	Vars	100	86.234	Mus_spretus
ENSMODG00000015204	-	100	86.472	ENSMPUG00000010821	VARS	100	86.472	Mustela_putorius_furo
ENSMODG00000015204	-	78	86.032	ENSMLUG00000013126	VARS	100	86.437	Myotis_lucifugus
ENSMODG00000015204	-	100	85.127	ENSNGAG00000012151	Vars	100	85.127	Nannospalax_galili
ENSMODG00000015204	-	100	64.884	ENSNBRG00000020520	vars	100	64.961	Neolamprologus_brichardi
ENSMODG00000015204	-	100	86.392	ENSNLEG00000006351	VARS	100	86.392	Nomascus_leucogenys
ENSMODG00000015204	-	100	90.981	ENSMEUG00000011378	VARS	100	90.981	Notamacropus_eugenii
ENSMODG00000015204	-	100	86.155	ENSOPRG00000003607	VARS	100	86.155	Ochotona_princeps
ENSMODG00000015204	-	100	85.285	ENSODEG00000017681	VARS	100	85.285	Octodon_degus
ENSMODG00000015204	-	100	65.520	ENSONIG00000013064	vars	99	68.690	Oreochromis_niloticus
ENSMODG00000015204	-	77	78.266	ENSOANG00000005400	VARS	98	77.910	Ornithorhynchus_anatinus
ENSMODG00000015204	-	100	84.044	ENSOCUG00000022463	VARS	100	84.281	Oryctolagus_cuniculus
ENSMODG00000015204	-	100	64.307	ENSORLG00000013063	vars	100	64.950	Oryzias_latipes
ENSMODG00000015204	-	100	65.073	ENSORLG00020003504	vars	100	65.127	Oryzias_latipes_hni
ENSMODG00000015204	-	100	65.248	ENSORLG00015009001	vars	100	65.402	Oryzias_latipes_hsok
ENSMODG00000015204	-	100	64.815	ENSOMEG00000015016	vars	100	64.892	Oryzias_melastigma
ENSMODG00000015204	-	100	85.997	ENSOGAG00000007515	VARS	100	85.997	Otolemur_garnettii
ENSMODG00000015204	-	100	86.946	ENSPPAG00000034012	VARS	100	86.946	Pan_paniscus
ENSMODG00000015204	-	100	86.709	ENSPPRG00000014855	VARS	100	86.709	Panthera_pardus
ENSMODG00000015204	-	85	87.175	ENSPTIG00000010462	VARS	94	86.944	Panthera_tigris_altaica
ENSMODG00000015204	-	100	86.867	ENSPTRG00000017985	VARS	100	86.867	Pan_troglodytes
ENSMODG00000015204	-	100	85.252	ENSPANG00000014565	VARS	100	85.252	Papio_anubis
ENSMODG00000015204	-	100	64.093	ENSPKIG00000016304	vars	100	64.253	Paramormyrops_kingsleyae
ENSMODG00000015204	-	100	65.852	ENSPMGG00000023909	vars	100	65.773	Periophthalmus_magnuspinnatus
ENSMODG00000015204	-	100	86.076	ENSPEMG00000006639	Vars	100	86.076	Peromyscus_maniculatus_bairdii
ENSMODG00000015204	-	100	95.016	ENSPCIG00000018553	VARS	100	95.016	Phascolarctos_cinereus
ENSMODG00000015204	-	100	65.759	ENSPFOG00000015690	vars	100	65.837	Poecilia_formosa
ENSMODG00000015204	-	100	66.090	ENSPLAG00000009590	vars	100	65.932	Poecilia_latipinna
ENSMODG00000015204	-	100	65.759	ENSPMEG00000004708	vars	100	65.837	Poecilia_mexicana
ENSMODG00000015204	-	100	63.608	ENSPREG00000013264	vars	100	63.529	Poecilia_reticulata
ENSMODG00000015204	-	100	85.285	ENSPPYG00000016460	VARS	100	85.285	Pongo_abelii
ENSMODG00000015204	-	85	85.252	ENSPCAG00000013565	VARS	85	85.252	Procavia_capensis
ENSMODG00000015204	-	100	86.482	ENSPCOG00000010942	VARS	100	86.798	Propithecus_coquereli
ENSMODG00000015204	-	100	83.386	ENSPVAG00000012403	VARS	100	83.386	Pteropus_vampyrus
ENSMODG00000015204	-	100	65.194	ENSPNYG00000022511	vars	100	65.271	Pundamilia_nyererei
ENSMODG00000015204	-	100	65.528	ENSPNAG00000020962	vars	100	65.373	Pygocentrus_nattereri
ENSMODG00000015204	-	100	85.839	ENSRNOG00000000867	Vars	100	85.839	Rattus_norvegicus
ENSMODG00000015204	-	100	86.788	ENSRBIG00000041669	VARS	100	86.788	Rhinopithecus_bieti
ENSMODG00000015204	-	100	86.788	ENSRROG00000045490	VARS	100	86.788	Rhinopithecus_roxellana
ENSMODG00000015204	-	100	86.709	ENSSBOG00000035402	VARS	100	86.709	Saimiri_boliviensis_boliviensis
ENSMODG00000015204	-	100	90.102	ENSSHAG00000006937	VARS	100	90.181	Sarcophilus_harrisii
ENSMODG00000015204	-	100	64.606	ENSSFOG00015014272	vars	100	64.583	Scleropages_formosus
ENSMODG00000015204	-	100	64.628	ENSSMAG00000009596	vars	99	64.701	Scophthalmus_maximus
ENSMODG00000015204	-	100	64.706	ENSSDUG00000014177	vars	100	64.783	Seriola_dumerili
ENSMODG00000015204	-	100	64.783	ENSSLDG00000025316	vars	100	64.861	Seriola_lalandi_dorsalis
ENSMODG00000015204	-	100	65.035	ENSSPAG00000017068	vars	100	65.187	Stegastes_partitus
ENSMODG00000015204	-	100	86.561	ENSSSCG00000038950	VARS	100	86.877	Sus_scrofa
ENSMODG00000015204	-	82	64.142	ENSTRUG00000012307	vars	98	64.088	Takifugu_rubripes
ENSMODG00000015204	-	100	65.023	ENSTNIG00000008011	vars	100	64.969	Tetraodon_nigroviridis
ENSMODG00000015204	-	53	91.386	ENSTBEG00000004728	-	60	91.386	Tupaia_belangeri
ENSMODG00000015204	-	100	79.035	ENSTTRG00000014128	VARS	100	79.035	Tursiops_truncatus
ENSMODG00000015204	-	100	82.942	ENSUAMG00000010424	VARS	100	82.942	Ursus_americanus
ENSMODG00000015204	-	93	85.873	ENSUMAG00000013486	VARS	98	85.714	Ursus_maritimus
ENSMODG00000015204	-	100	85.534	ENSVVUG00000021323	VARS	100	85.455	Vulpes_vulpes
ENSMODG00000015204	-	96	62.933	ENSXETG00000024076	vars	98	62.933	Xenopus_tropicalis
ENSMODG00000015204	-	100	65.669	ENSXCOG00000019172	vars	100	65.748	Xiphophorus_couchianus
ENSMODG00000015204	-	100	65.681	ENSXMAG00000010927	vars	100	65.759	Xiphophorus_maculatus