EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSMODG00000015377 (Gene tree)
Gene ID: 100014851
Gene Symbol: RCL1
Alias: RNAC|RPCL1
Full Name: RNA terminal phosphate cyclase like 1
Gene Type: protein_coding
Species: Monodelphis_domestica
Status: putative
Strand: Plus strand
Length: 111690 bases
Position: chr6:166610152-166721841
Accession: 17687
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMODP00000019198	RTC	PF01137.21	2.1e-63	1	1
ENSMODP00000019198	RTC_insert	PF05189.13	1.7e-36	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMODT00000019545	RCL1-201	2491	-	ENSMODP00000019198	376 (aa)	-	F6WH36

Gene Model

Click here to download ENSMODG00000015377's gene model file

Pathways

Pathway ID	Pathway Name	Source
mdo03008	Ribosome biogenesis in eukaryotes	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMODG00000015377's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMODG00000015377	RCL1	94	93.803	ENSG00000120158	RCL1	96	93.130	Homo_sapiens
ENSMODG00000015377	RCL1	94	77.809	ENSAPOG00000015666	rcl1	95	77.809	Acanthochromis_polyacanthus
ENSMODG00000015377	RCL1	94	93.803	ENSAMEG00000002631	RCL1	95	93.803	Ailuropoda_melanoleuca
ENSMODG00000015377	RCL1	93	77.557	ENSACIG00000021195	rcl1	95	77.557	Amphilophus_citrinellus
ENSMODG00000015377	RCL1	94	76.966	ENSAOCG00000002223	rcl1	95	76.966	Amphiprion_ocellaris
ENSMODG00000015377	RCL1	94	77.247	ENSAPEG00000006905	rcl1	95	77.247	Amphiprion_percula
ENSMODG00000015377	RCL1	93	75.568	ENSATEG00000020026	rcl1	95	75.568	Anabas_testudineus
ENSMODG00000015377	RCL1	82	85.806	ENSAPLG00000006031	RCL1	94	85.806	Anas_platyrhynchos
ENSMODG00000015377	RCL1	94	86.197	ENSACAG00000003640	RCL1	95	86.197	Anolis_carolinensis
ENSMODG00000015377	RCL1	94	92.958	ENSANAG00000037372	RCL1	95	92.958	Aotus_nancymaae
ENSMODG00000015377	RCL1	93	77.273	ENSACLG00000021724	rcl1	95	77.273	Astatotilapia_calliptera
ENSMODG00000015377	RCL1	93	77.143	ENSAMXG00000033394	rcl1	95	77.143	Astyanax_mexicanus
ENSMODG00000015377	RCL1	94	44.693	WBGene00022852	ZK1127.5	89	45.723	Caenorhabditis_elegans
ENSMODG00000015377	RCL1	94	93.803	ENSCJAG00000011202	RCL1	95	93.803	Callithrix_jacchus
ENSMODG00000015377	RCL1	94	93.239	ENSCAFG00000002091	RCL1	95	93.239	Canis_familiaris
ENSMODG00000015377	RCL1	94	93.521	ENSCAFG00020000638	RCL1	74	93.521	Canis_lupus_dingo
ENSMODG00000015377	RCL1	94	92.394	ENSCHIG00000012407	RCL1	95	92.394	Capra_hircus
ENSMODG00000015377	RCL1	82	94.498	ENSTSYG00000009592	RCL1	87	94.479	Carlito_syrichta
ENSMODG00000015377	RCL1	60	80.864	ENSCAPG00000013575	RCL1	91	80.864	Cavia_aperea
ENSMODG00000015377	RCL1	94	93.239	ENSCPOG00000015354	RCL1	95	93.239	Cavia_porcellus
ENSMODG00000015377	RCL1	94	93.521	ENSCCAG00000033505	RCL1	95	93.521	Cebus_capucinus
ENSMODG00000015377	RCL1	94	93.803	ENSCATG00000034721	RCL1	95	93.803	Cercocebus_atys
ENSMODG00000015377	RCL1	94	92.958	ENSCLAG00000007445	RCL1	95	92.958	Chinchilla_lanigera
ENSMODG00000015377	RCL1	94	93.521	ENSCSAG00000008811	RCL1	95	93.521	Chlorocebus_sabaeus
ENSMODG00000015377	RCL1	86	78.638	ENSCHOG00000007216	RCL1	100	78.638	Choloepus_hoffmanni
ENSMODG00000015377	RCL1	94	89.577	ENSCPBG00000025481	RCL1	89	89.389	Chrysemys_picta_bellii
ENSMODG00000015377	RCL1	90	59.644	ENSCING00000019565	-	89	59.644	Ciona_intestinalis
ENSMODG00000015377	RCL1	94	93.521	ENSCANG00000027099	RCL1	95	93.521	Colobus_angolensis_palliatus
ENSMODG00000015377	RCL1	94	92.676	ENSCGRG00001013748	Rcl1	95	92.676	Cricetulus_griseus_chok1gshd
ENSMODG00000015377	RCL1	82	93.226	ENSCGRG00000005843	Rcl1	94	93.226	Cricetulus_griseus_crigri
ENSMODG00000015377	RCL1	93	77.841	ENSCSEG00000000712	rcl1	93	77.841	Cynoglossus_semilaevis
ENSMODG00000015377	RCL1	93	79.261	ENSCVAG00000011536	rcl1	95	79.261	Cyprinodon_variegatus
ENSMODG00000015377	RCL1	93	76.504	ENSDARG00000038312	rcl1	95	76.504	Danio_rerio
ENSMODG00000015377	RCL1	66	93.117	ENSDNOG00000019911	RCL1	93	93.117	Dasypus_novemcinctus
ENSMODG00000015377	RCL1	94	92.676	ENSDORG00000015645	Rcl1	95	92.676	Dipodomys_ordii
ENSMODG00000015377	RCL1	91	53.468	FBgn0020909	Rtc1	92	52.841	Drosophila_melanogaster
ENSMODG00000015377	RCL1	82	59.547	ENSETEG00000014087	-	94	59.547	Echinops_telfairi
ENSMODG00000015377	RCL1	94	52.113	ENSEBUG00000016621	-	95	52.113	Eptatretus_burgeri
ENSMODG00000015377	RCL1	94	94.085	ENSEASG00005010653	RCL1	95	94.085	Equus_asinus_asinus
ENSMODG00000015377	RCL1	94	94.085	ENSECAG00000015973	RCL1	95	94.085	Equus_caballus
ENSMODG00000015377	RCL1	86	85.494	ENSEEUG00000009801	RCL1	94	85.494	Erinaceus_europaeus
ENSMODG00000015377	RCL1	94	75.281	ENSELUG00000007353	rcl1	95	75.281	Esox_lucius
ENSMODG00000015377	RCL1	94	92.676	ENSFCAG00000014557	RCL1	95	92.676	Felis_catus
ENSMODG00000015377	RCL1	90	81.009	ENSFALG00000010553	RCL1	89	81.009	Ficedula_albicollis
ENSMODG00000015377	RCL1	82	91.909	ENSFDAG00000004209	RCL1	94	91.909	Fukomys_damarensis
ENSMODG00000015377	RCL1	93	78.125	ENSFHEG00000011228	rcl1	95	78.125	Fundulus_heteroclitus
ENSMODG00000015377	RCL1	93	75.852	ENSGMOG00000004677	rcl1	95	75.852	Gadus_morhua
ENSMODG00000015377	RCL1	93	84.615	ENSGALG00000015024	RCL1	94	84.615	Gallus_gallus
ENSMODG00000015377	RCL1	93	77.273	ENSGAFG00000007257	rcl1	95	77.273	Gambusia_affinis
ENSMODG00000015377	RCL1	94	77.528	ENSGACG00000017474	rcl1	95	77.528	Gasterosteus_aculeatus
ENSMODG00000015377	RCL1	94	89.014	ENSGAGG00000003689	RCL1	95	89.014	Gopherus_agassizii
ENSMODG00000015377	RCL1	94	93.803	ENSGGOG00000015041	RCL1	95	93.803	Gorilla_gorilla
ENSMODG00000015377	RCL1	93	76.989	ENSHBUG00000001393	rcl1	95	76.989	Haplochromis_burtoni
ENSMODG00000015377	RCL1	94	92.958	ENSHGLG00000016452	RCL1	95	92.958	Heterocephalus_glaber_female
ENSMODG00000015377	RCL1	94	76.901	ENSHGLG00000005368	-	95	76.338	Heterocephalus_glaber_female
ENSMODG00000015377	RCL1	94	86.197	ENSHGLG00100008718	-	95	86.197	Heterocephalus_glaber_male
ENSMODG00000015377	RCL1	94	77.746	ENSHGLG00100018010	-	95	77.183	Heterocephalus_glaber_male
ENSMODG00000015377	RCL1	93	77.841	ENSHCOG00000020170	rcl1	95	77.841	Hippocampus_comes
ENSMODG00000015377	RCL1	93	77.429	ENSIPUG00000018054	RCL1	95	77.429	Ictalurus_punctatus
ENSMODG00000015377	RCL1	94	92.676	ENSSTOG00000000023	RCL1	95	92.676	Ictidomys_tridecemlineatus
ENSMODG00000015377	RCL1	94	80.563	ENSJJAG00000015632	-	95	80.563	Jaculus_jaculus
ENSMODG00000015377	RCL1	94	91.549	ENSJJAG00000022803	-	95	91.549	Jaculus_jaculus
ENSMODG00000015377	RCL1	52	70.051	ENSJJAG00000000764	-	92	70.000	Jaculus_jaculus
ENSMODG00000015377	RCL1	93	77.937	ENSKMAG00000011946	rcl1	94	77.937	Kryptolebias_marmoratus
ENSMODG00000015377	RCL1	93	74.716	ENSLBEG00000003957	rcl1	94	74.716	Labrus_bergylta
ENSMODG00000015377	RCL1	90	80.826	ENSLACG00000004594	RCL1	98	84.858	Latimeria_chalumnae
ENSMODG00000015377	RCL1	94	81.972	ENSLOCG00000010148	rcl1	94	81.972	Lepisosteus_oculatus
ENSMODG00000015377	RCL1	94	89.859	ENSLAFG00000017495	RCL1	95	89.859	Loxodonta_africana
ENSMODG00000015377	RCL1	94	93.521	ENSMFAG00000037906	RCL1	95	93.521	Macaca_fascicularis
ENSMODG00000015377	RCL1	94	93.521	ENSMNEG00000012288	RCL1	96	92.638	Macaca_nemestrina
ENSMODG00000015377	RCL1	94	93.521	ENSMLEG00000043088	RCL1	95	93.521	Mandrillus_leucophaeus
ENSMODG00000015377	RCL1	93	76.989	ENSMAMG00000008311	rcl1	95	76.989	Mastacembelus_armatus
ENSMODG00000015377	RCL1	93	77.273	ENSMZEG00005017292	rcl1	95	77.273	Maylandia_zebra
ENSMODG00000015377	RCL1	52	83.582	ENSMGAG00000002245	RCL1	89	83.505	Meleagris_gallopavo
ENSMODG00000015377	RCL1	52	94.924	ENSMAUG00000008922	Rcl1	88	94.737	Mesocricetus_auratus
ENSMODG00000015377	RCL1	94	92.394	ENSMICG00000015562	RCL1	95	92.394	Microcebus_murinus
ENSMODG00000015377	RCL1	94	92.958	ENSMOCG00000012145	Rcl1	95	92.958	Microtus_ochrogaster
ENSMODG00000015377	RCL1	93	74.504	ENSMMOG00000021264	rcl1	95	74.504	Mola_mola
ENSMODG00000015377	RCL1	93	76.705	ENSMALG00000018618	rcl1	95	76.705	Monopterus_albus
ENSMODG00000015377	RCL1	94	93.239	MGP_CAROLIEiJ_G0022853	Rcl1	95	93.239	Mus_caroli
ENSMODG00000015377	RCL1	94	92.676	ENSMUSG00000024785	Rcl1	95	92.676	Mus_musculus
ENSMODG00000015377	RCL1	94	92.676	MGP_PahariEiJ_G0014346	Rcl1	95	92.676	Mus_pahari
ENSMODG00000015377	RCL1	94	92.676	MGP_SPRETEiJ_G0023771	Rcl1	95	92.676	Mus_spretus
ENSMODG00000015377	RCL1	94	92.676	ENSMPUG00000004998	RCL1	95	92.676	Mustela_putorius_furo
ENSMODG00000015377	RCL1	94	92.676	ENSMLUG00000009654	RCL1	95	92.676	Myotis_lucifugus
ENSMODG00000015377	RCL1	94	92.113	ENSNGAG00000015327	Rcl1	95	92.113	Nannospalax_galili
ENSMODG00000015377	RCL1	86	75.692	ENSNBRG00000019854	rcl1	91	73.235	Neolamprologus_brichardi
ENSMODG00000015377	RCL1	94	90.704	ENSNLEG00000008891	RCL1	95	90.704	Nomascus_leucogenys
ENSMODG00000015377	RCL1	94	91.268	ENSMEUG00000007653	RCL1	95	91.268	Notamacropus_eugenii
ENSMODG00000015377	RCL1	94	91.549	ENSOPRG00000010965	RCL1	95	91.549	Ochotona_princeps
ENSMODG00000015377	RCL1	82	74.204	ENSODEG00000004151	RCL1	90	75.161	Octodon_degus
ENSMODG00000015377	RCL1	93	77.273	ENSONIG00000003871	rcl1	95	77.273	Oreochromis_niloticus
ENSMODG00000015377	RCL1	62	89.787	ENSOANG00000013193	-	93	89.787	Ornithorhynchus_anatinus
ENSMODG00000015377	RCL1	94	93.239	ENSOCUG00000008161	RCL1	95	93.239	Oryctolagus_cuniculus
ENSMODG00000015377	RCL1	94	75.562	ENSORLG00000010443	rcl1	95	75.562	Oryzias_latipes
ENSMODG00000015377	RCL1	94	75.562	ENSORLG00020012211	rcl1	95	75.562	Oryzias_latipes_hni
ENSMODG00000015377	RCL1	94	75.281	ENSORLG00015001122	rcl1	95	75.281	Oryzias_latipes_hsok
ENSMODG00000015377	RCL1	94	77.247	ENSOMEG00000022976	rcl1	83	77.247	Oryzias_melastigma
ENSMODG00000015377	RCL1	94	91.831	ENSOGAG00000007480	RCL1	95	91.831	Otolemur_garnettii
ENSMODG00000015377	RCL1	94	92.676	ENSOARG00000013463	RCL1	95	92.676	Ovis_aries
ENSMODG00000015377	RCL1	94	93.521	ENSPPAG00000037958	RCL1	95	93.521	Pan_paniscus
ENSMODG00000015377	RCL1	94	92.394	ENSPPRG00000022645	RCL1	95	92.394	Panthera_pardus
ENSMODG00000015377	RCL1	82	93.506	ENSPTIG00000019031	RCL1	88	93.158	Panthera_tigris_altaica
ENSMODG00000015377	RCL1	94	93.239	ENSPTRG00000020743	RCL1	95	93.239	Pan_troglodytes
ENSMODG00000015377	RCL1	94	93.521	ENSPANG00000025151	RCL1	95	93.521	Papio_anubis
ENSMODG00000015377	RCL1	94	78.090	ENSPKIG00000021022	rcl1	95	78.090	Paramormyrops_kingsleyae
ENSMODG00000015377	RCL1	82	89.355	ENSPSIG00000012302	RCL1	95	89.355	Pelodiscus_sinensis
ENSMODG00000015377	RCL1	94	75.000	ENSPMGG00000024007	rcl1	95	75.000	Periophthalmus_magnuspinnatus
ENSMODG00000015377	RCL1	94	93.521	ENSPEMG00000023275	Rcl1	95	93.521	Peromyscus_maniculatus_bairdii
ENSMODG00000015377	RCL1	89	30.973	ENSPMAG00000009110	rtca	90	30.973	Petromyzon_marinus
ENSMODG00000015377	RCL1	94	98.873	ENSPCIG00000000188	RCL1	95	98.873	Phascolarctos_cinereus
ENSMODG00000015377	RCL1	93	77.841	ENSPFOG00000019682	rcl1	94	77.841	Poecilia_formosa
ENSMODG00000015377	RCL1	93	77.841	ENSPLAG00000022354	rcl1	95	77.841	Poecilia_latipinna
ENSMODG00000015377	RCL1	93	77.841	ENSPMEG00000008131	rcl1	95	77.841	Poecilia_mexicana
ENSMODG00000015377	RCL1	93	77.557	ENSPREG00000008032	rcl1	95	77.557	Poecilia_reticulata
ENSMODG00000015377	RCL1	94	93.521	ENSPPYG00000019244	RCL1	95	93.521	Pongo_abelii
ENSMODG00000015377	RCL1	94	82.535	ENSPCAG00000001440	RCL1	95	82.535	Procavia_capensis
ENSMODG00000015377	RCL1	94	93.239	ENSPCOG00000009611	RCL1	95	93.239	Propithecus_coquereli
ENSMODG00000015377	RCL1	94	94.366	ENSPVAG00000015752	RCL1	95	94.366	Pteropus_vampyrus
ENSMODG00000015377	RCL1	93	77.273	ENSPNYG00000012910	rcl1	95	77.273	Pundamilia_nyererei
ENSMODG00000015377	RCL1	94	76.338	ENSPNAG00000028307	rcl1	87	76.338	Pygocentrus_nattereri
ENSMODG00000015377	RCL1	94	92.676	ENSRNOG00000015491	Rcl1	95	92.676	Rattus_norvegicus
ENSMODG00000015377	RCL1	94	93.239	ENSRBIG00000035818	RCL1	95	93.239	Rhinopithecus_bieti
ENSMODG00000015377	RCL1	94	93.521	ENSRROG00000029781	RCL1	95	93.521	Rhinopithecus_roxellana
ENSMODG00000015377	RCL1	90	36.127	YOL010W	-	91	36.416	Saccharomyces_cerevisiae
ENSMODG00000015377	RCL1	94	94.085	ENSSBOG00000026369	RCL1	95	94.085	Saimiri_boliviensis_boliviensis
ENSMODG00000015377	RCL1	83	96.795	ENSSHAG00000014086	RCL1	95	96.795	Sarcophilus_harrisii
ENSMODG00000015377	RCL1	94	78.371	ENSSFOG00015023020	rcl1	95	78.371	Scleropages_formosus
ENSMODG00000015377	RCL1	93	77.557	ENSSMAG00000019751	rcl1	81	77.557	Scophthalmus_maximus
ENSMODG00000015377	RCL1	94	77.528	ENSSDUG00000006349	rcl1	95	77.528	Seriola_dumerili
ENSMODG00000015377	RCL1	94	77.247	ENSSLDG00000022076	rcl1	95	77.247	Seriola_lalandi_dorsalis
ENSMODG00000015377	RCL1	94	93.239	ENSSARG00000009260	RCL1	95	93.239	Sorex_araneus
ENSMODG00000015377	RCL1	94	87.606	ENSSPUG00000016330	RCL1	95	87.606	Sphenodon_punctatus
ENSMODG00000015377	RCL1	94	78.371	ENSSPAG00000018038	rcl1	95	78.371	Stegastes_partitus
ENSMODG00000015377	RCL1	94	94.366	ENSSSCG00000005217	RCL1	79	94.366	Sus_scrofa
ENSMODG00000015377	RCL1	94	83.754	ENSTGUG00000005138	RCL1	95	83.754	Taeniopygia_guttata
ENSMODG00000015377	RCL1	93	77.557	ENSTRUG00000010493	rcl1	95	77.557	Takifugu_rubripes
ENSMODG00000015377	RCL1	93	76.068	ENSTNIG00000013214	rcl1	94	76.068	Tetraodon_nigroviridis
ENSMODG00000015377	RCL1	94	86.197	ENSTBEG00000016339	RCL1	95	86.197	Tupaia_belangeri
ENSMODG00000015377	RCL1	94	93.521	ENSTTRG00000016525	RCL1	95	93.521	Tursiops_truncatus
ENSMODG00000015377	RCL1	94	93.803	ENSUAMG00000005598	RCL1	100	93.519	Ursus_americanus
ENSMODG00000015377	RCL1	82	93.528	ENSUMAG00000017890	RCL1	92	93.528	Ursus_maritimus
ENSMODG00000015377	RCL1	82	95.469	ENSVPAG00000009188	RCL1	94	95.469	Vicugna_pacos
ENSMODG00000015377	RCL1	82	94.194	ENSVVUG00000007304	RCL1	84	94.194	Vulpes_vulpes
ENSMODG00000015377	RCL1	94	75.562	ENSXETG00000000592	rcl1	95	75.562	Xenopus_tropicalis
ENSMODG00000015377	RCL1	58	30.455	ENSXCOG00000008002	rtca	63	30.455	Xiphophorus_couchianus
ENSMODG00000015377	RCL1	93	77.841	ENSXCOG00000004922	rcl1	95	77.841	Xiphophorus_couchianus
ENSMODG00000015377	RCL1	93	77.841	ENSXMAG00000022366	RCL1	95	77.841	Xiphophorus_maculatus