EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSMODG00000015579 (Gene tree)
Gene ID: 100013304
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Monodelphis_domestica
Status: putative
Strand: Plus strand
Length: 13687 bases
Position: chr6:158934772-158948458
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMODP00000019441	eIF-3c_N	PF05470.12	4.2e-264	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMODT00000019790	-	2730	-	ENSMODP00000019441	909 (aa)	-	F6ZV84

Gene Model

Click here to download ENSMODG00000015579's gene model file

Pathways

Pathway ID	Pathway Name	Source
mdo03013	RNA transport	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMODG00000015579's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMODG00000015579	-	100	95.077	ENSG00000184110	EIF3C	100	95.946	Homo_sapiens
ENSMODG00000015579	-	100	94.208	ENSG00000205609	EIF3CL	100	94.317	Homo_sapiens
ENSMODG00000015579	-	100	75.054	ENSAPOG00000024092	eif3c	92	84.039	Acanthochromis_polyacanthus
ENSMODG00000015579	-	100	95.077	ENSAMEG00000015454	-	100	95.077	Ailuropoda_melanoleuca
ENSMODG00000015579	-	99	73.232	ENSACIG00000015082	eif3c	93	84.167	Amphilophus_citrinellus
ENSMODG00000015579	-	100	75.321	ENSAOCG00000021466	eif3c	94	84.020	Amphiprion_ocellaris
ENSMODG00000015579	-	100	75.321	ENSAPEG00000010521	eif3c	94	84.020	Amphiprion_percula
ENSMODG00000015579	-	100	75.214	ENSATEG00000019001	eif3c	100	75.294	Anabas_testudineus
ENSMODG00000015579	-	100	86.776	ENSACAG00000005937	-	100	86.120	Anolis_carolinensis
ENSMODG00000015579	-	100	94.967	ENSANAG00000020640	-	100	94.967	Aotus_nancymaae
ENSMODG00000015579	-	83	81.384	ENSACLG00000009322	eif3c	91	80.914	Astatotilapia_calliptera
ENSMODG00000015579	-	83	83.806	ENSACLG00000009347	eif3c	100	71.335	Astatotilapia_calliptera
ENSMODG00000015579	-	100	75.000	ENSAMXG00000020949	eif3c	100	75.670	Astyanax_mexicanus
ENSMODG00000015579	-	100	92.998	ENSBTAG00000006543	EIF3CL	100	94.201	Bos_taurus
ENSMODG00000015579	-	95	41.957	WBGene00001226	eif-3.C	93	42.295	Caenorhabditis_elegans
ENSMODG00000015579	-	100	94.858	ENSCJAG00000006341	-	100	94.858	Callithrix_jacchus
ENSMODG00000015579	-	100	94.858	ENSCAFG00000017143	-	100	94.858	Canis_familiaris
ENSMODG00000015579	-	100	94.967	ENSCAFG00020017587	-	100	94.967	Canis_lupus_dingo
ENSMODG00000015579	-	100	92.888	ENSCHIG00000024795	-	100	94.311	Capra_hircus
ENSMODG00000015579	-	100	94.858	ENSTSYG00000003486	-	100	94.858	Carlito_syrichta
ENSMODG00000015579	-	96	86.199	ENSCAPG00000015887	-	100	85.973	Cavia_aperea
ENSMODG00000015579	-	100	95.186	ENSCPOG00000007533	-	100	95.186	Cavia_porcellus
ENSMODG00000015579	-	99	78.965	ENSCCAG00000029099	-	99	79.052	Cebus_capucinus
ENSMODG00000015579	-	100	93.873	ENSCCAG00000034928	-	100	93.873	Cebus_capucinus
ENSMODG00000015579	-	100	89.825	ENSCCAG00000027724	-	100	89.059	Cebus_capucinus
ENSMODG00000015579	-	100	94.967	ENSCATG00000032673	-	100	94.967	Cercocebus_atys
ENSMODG00000015579	-	100	94.748	ENSCLAG00000011094	-	100	94.748	Chinchilla_lanigera
ENSMODG00000015579	-	100	94.967	ENSCSAG00000006297	-	100	94.967	Chlorocebus_sabaeus
ENSMODG00000015579	-	55	82.239	ENSCHOG00000003120	-	88	82.239	Choloepus_hoffmanni
ENSMODG00000015579	-	71	92.038	ENSCPBG00000012407	-	94	80.230	Chrysemys_picta_bellii
ENSMODG00000015579	-	79	55.993	ENSCSAVG00000006744	-	93	56.667	Ciona_savignyi
ENSMODG00000015579	-	100	94.967	ENSCANG00000033626	-	100	94.967	Colobus_angolensis_palliatus
ENSMODG00000015579	-	100	93.654	ENSCGRG00001015265	EIF3C	100	93.654	Cricetulus_griseus_chok1gshd
ENSMODG00000015579	-	100	74.863	ENSCSEG00000017770	eif3c	100	74.401	Cynoglossus_semilaevis
ENSMODG00000015579	-	100	74.598	ENSCVAG00000005402	eif3c	100	75.027	Cyprinodon_variegatus
ENSMODG00000015579	-	100	75.725	ENSDARG00000016443	eif3c	100	75.294	Danio_rerio
ENSMODG00000015579	-	100	95.077	ENSDNOG00000031497	-	100	95.077	Dasypus_novemcinctus
ENSMODG00000015579	-	100	95.077	ENSDORG00000016471	Eif3c	100	95.077	Dipodomys_ordii
ENSMODG00000015579	-	98	49.499	FBgn0034258	eIF3c	67	54.240	Drosophila_melanogaster
ENSMODG00000015579	-	92	96.804	ENSETEG00000013527	-	92	96.804	Echinops_telfairi
ENSMODG00000015579	-	99	62.648	ENSEBUG00000001629	eif3c	99	63.402	Eptatretus_burgeri
ENSMODG00000015579	-	100	95.077	ENSECAG00000008746	-	100	95.077	Equus_caballus
ENSMODG00000015579	-	63	64.273	ENSEEUG00000000726	-	64	63.837	Erinaceus_europaeus
ENSMODG00000015579	-	87	93.484	ENSEEUG00000006148	-	100	93.484	Erinaceus_europaeus
ENSMODG00000015579	-	99	76.009	ENSELUG00000022257	eif3c	92	83.389	Esox_lucius
ENSMODG00000015579	-	100	94.858	ENSFCAG00000015782	-	100	94.858	Felis_catus
ENSMODG00000015579	-	100	94.858	ENSFDAG00000003588	-	100	94.858	Fukomys_damarensis
ENSMODG00000015579	-	100	75.164	ENSFHEG00000014154	EIF3C	100	75.000	Fundulus_heteroclitus
ENSMODG00000015579	-	97	74.382	ENSGMOG00000016885	eif3c	99	75.281	Gadus_morhua
ENSMODG00000015579	-	96	77.045	ENSGACG00000007652	eif3c	100	76.066	Gasterosteus_aculeatus
ENSMODG00000015579	-	92	85.444	ENSGAGG00000006666	-	100	84.497	Gopherus_agassizii
ENSMODG00000015579	-	53	95.753	ENSGGOG00000022677	-	99	95.753	Gorilla_gorilla
ENSMODG00000015579	-	99	92.747	ENSGGOG00000026919	EIF3C	100	94.886	Gorilla_gorilla
ENSMODG00000015579	-	100	94.858	ENSHGLG00000011445	EIF3C	100	94.858	Heterocephalus_glaber_female
ENSMODG00000015579	-	100	94.858	ENSHGLG00100000217	EIF3C	100	94.858	Heterocephalus_glaber_male
ENSMODG00000015579	-	99	74.866	ENSHCOG00000019694	eif3c	100	75.510	Hippocampus_comes
ENSMODG00000015579	-	100	74.545	ENSIPUG00000016878	eif3c	100	75.401	Ictalurus_punctatus
ENSMODG00000015579	-	100	94.858	ENSSTOG00000021278	-	100	94.858	Ictidomys_tridecemlineatus
ENSMODG00000015579	-	100	93.982	ENSJJAG00000012722	Eif3c	100	93.982	Jaculus_jaculus
ENSMODG00000015579	-	98	76.444	ENSKMAG00000021662	eif3c	99	73.751	Kryptolebias_marmoratus
ENSMODG00000015579	-	98	75.889	ENSLBEG00000023370	eif3c	100	74.544	Labrus_bergylta
ENSMODG00000015579	-	98	79.621	ENSLACG00000000770	eif3c	100	80.413	Latimeria_chalumnae
ENSMODG00000015579	-	100	94.420	ENSLAFG00000027426	-	100	94.420	Loxodonta_africana
ENSMODG00000015579	-	100	94.967	ENSMFAG00000041930	-	100	94.967	Macaca_fascicularis
ENSMODG00000015579	-	100	94.967	ENSMMUG00000011798	-	100	94.967	Macaca_mulatta
ENSMODG00000015579	-	100	94.967	ENSMNEG00000023915	-	100	94.967	Macaca_nemestrina
ENSMODG00000015579	-	100	94.967	ENSMLEG00000027529	-	100	94.967	Mandrillus_leucophaeus
ENSMODG00000015579	-	100	75.427	ENSMAMG00000012512	eif3c	96	83.908	Mastacembelus_armatus
ENSMODG00000015579	-	83	81.549	ENSMZEG00005013685	eif3c	91	81.077	Maylandia_zebra
ENSMODG00000015579	-	99	71.366	ENSMZEG00005013699	eif3c	89	83.306	Maylandia_zebra
ENSMODG00000015579	-	100	93.654	ENSMAUG00000010621	Eif3c	100	93.654	Mesocricetus_auratus
ENSMODG00000015579	-	100	94.967	ENSMICG00000036748	-	100	94.967	Microcebus_murinus
ENSMODG00000015579	-	100	91.466	ENSMOCG00000004204	Eif3c	100	91.466	Microtus_ochrogaster
ENSMODG00000015579	-	100	72.180	ENSMMOG00000001572	eif3c	72	82.867	Mola_mola
ENSMODG00000015579	-	84	84.437	ENSMALG00000008907	eif3c	92	84.298	Monopterus_albus
ENSMODG00000015579	-	100	93.654	MGP_CAROLIEiJ_G0030451	Eif3c	100	93.654	Mus_caroli
ENSMODG00000015579	-	100	93.654	ENSMUSG00000030738	Eif3c	100	93.654	Mus_musculus
ENSMODG00000015579	-	100	92.998	MGP_PahariEiJ_G0013661	Eif3c	100	92.998	Mus_pahari
ENSMODG00000015579	-	100	93.654	MGP_SPRETEiJ_G0031565	Eif3c	100	93.654	Mus_spretus
ENSMODG00000015579	-	96	94.665	ENSMPUG00000012732	-	100	94.665	Mustela_putorius_furo
ENSMODG00000015579	-	100	92.451	ENSMLUG00000015558	-	100	93.654	Myotis_lucifugus
ENSMODG00000015579	-	92	83.636	ENSNGAG00000010901	-	98	83.636	Nannospalax_galili
ENSMODG00000015579	-	100	94.530	ENSNGAG00000007177	-	100	94.530	Nannospalax_galili
ENSMODG00000015579	-	100	80.541	ENSNLEG00000001425	-	91	90.000	Nomascus_leucogenys
ENSMODG00000015579	-	100	81.051	ENSMEUG00000009939	-	99	81.291	Notamacropus_eugenii
ENSMODG00000015579	-	89	62.658	ENSMEUG00000005317	-	95	71.552	Notamacropus_eugenii
ENSMODG00000015579	-	100	94.639	ENSOPRG00000000931	-	100	94.639	Ochotona_princeps
ENSMODG00000015579	-	100	94.639	ENSODEG00000013508	-	100	94.639	Octodon_degus
ENSMODG00000015579	-	66	62.748	ENSONIG00000011434	eif3c	99	62.748	Oreochromis_niloticus
ENSMODG00000015579	-	100	94.397	ENSOANG00000011410	-	100	94.397	Ornithorhynchus_anatinus
ENSMODG00000015579	-	100	94.967	ENSOCUG00000022489	-	100	94.967	Oryctolagus_cuniculus
ENSMODG00000015579	-	98	74.916	ENSORLG00000006318	eif3c	95	74.204	Oryzias_latipes
ENSMODG00000015579	-	98	74.916	ENSORLG00020015713	eif3c	91	83.080	Oryzias_latipes_hni
ENSMODG00000015579	-	98	75.028	ENSORLG00015013772	eif3c	97	74.696	Oryzias_latipes_hsok
ENSMODG00000015579	-	100	74.544	ENSOMEG00000020450	eif3c	100	74.221	Oryzias_melastigma
ENSMODG00000015579	-	100	94.748	ENSOGAG00000012737	-	100	94.748	Otolemur_garnettii
ENSMODG00000015579	-	100	92.888	ENSOARG00000002892	-	100	94.311	Ovis_aries
ENSMODG00000015579	-	100	94.858	ENSPPRG00000012336	-	100	94.858	Panthera_pardus
ENSMODG00000015579	-	100	94.858	ENSPTIG00000011712	-	100	94.858	Panthera_tigris_altaica
ENSMODG00000015579	-	100	94.967	ENSPANG00000021151	-	100	94.967	Papio_anubis
ENSMODG00000015579	-	100	74.973	ENSPKIG00000002049	eif3c	100	74.973	Paramormyrops_kingsleyae
ENSMODG00000015579	-	90	83.717	ENSPMGG00000005409	eif3c	95	83.717	Periophthalmus_magnuspinnatus
ENSMODG00000015579	-	100	92.232	ENSPEMG00000010899	Eif3c	100	92.232	Peromyscus_maniculatus_bairdii
ENSMODG00000015579	-	100	99.013	ENSPCIG00000025206	-	100	99.013	Phascolarctos_cinereus
ENSMODG00000015579	-	100	74.973	ENSPFOG00000004476	eif3c	100	74.332	Poecilia_formosa
ENSMODG00000015579	-	100	71.413	ENSPLAG00000017480	eif3c	100	74.164	Poecilia_latipinna
ENSMODG00000015579	-	100	75.161	ENSPMEG00000019512	eif3c	100	73.876	Poecilia_mexicana
ENSMODG00000015579	-	100	71.772	ENSPREG00000023139	eif3c	89	83.444	Poecilia_reticulata
ENSMODG00000015579	-	100	92.123	ENSPPYG00000007227	-	100	92.123	Pongo_abelii
ENSMODG00000015579	-	66	96.678	ENSPCAG00000012710	-	100	96.678	Procavia_capensis
ENSMODG00000015579	-	100	95.295	ENSPCOG00000019289	-	100	95.295	Propithecus_coquereli
ENSMODG00000015579	-	100	94.639	ENSPVAG00000005804	-	100	94.639	Pteropus_vampyrus
ENSMODG00000015579	-	50	80.606	ENSPNYG00000016530	eif3c	82	80.606	Pundamilia_nyererei
ENSMODG00000015579	-	100	75.892	ENSPNAG00000024040	eif3c	100	75.892	Pygocentrus_nattereri
ENSMODG00000015579	-	100	93.217	ENSRNOG00000018761	Eif3c	100	93.217	Rattus_norvegicus
ENSMODG00000015579	-	97	95.017	ENSRBIG00000044009	-	98	91.027	Rhinopithecus_bieti
ENSMODG00000015579	-	100	94.967	ENSRROG00000043626	-	100	94.967	Rhinopithecus_roxellana
ENSMODG00000015579	-	76	30.996	YMR309C	-	82	30.965	Saccharomyces_cerevisiae
ENSMODG00000015579	-	100	94.748	ENSSBOG00000032155	-	100	94.748	Saimiri_boliviensis_boliviensis
ENSMODG00000015579	-	96	98.865	ENSSHAG00000011808	-	100	98.865	Sarcophilus_harrisii
ENSMODG00000015579	-	99	76.242	ENSSFOG00015021823	eif3c	99	76.782	Scleropages_formosus
ENSMODG00000015579	-	97	77.252	ENSSMAG00000016638	eif3c	97	77.365	Scophthalmus_maximus
ENSMODG00000015579	-	97	79.532	ENSSDUG00000023117	eif3c	100	75.884	Seriola_dumerili
ENSMODG00000015579	-	100	74.973	ENSSLDG00000009706	eif3c	93	83.687	Seriola_lalandi_dorsalis
ENSMODG00000015579	-	100	84.354	ENSSPUG00000016470	-	100	85.120	Sphenodon_punctatus
ENSMODG00000015579	-	100	76.113	ENSSPAG00000000426	eif3c	100	76.170	Stegastes_partitus
ENSMODG00000015579	-	100	94.858	ENSSSCG00000034927	-	100	94.858	Sus_scrofa
ENSMODG00000015579	-	99	74.865	ENSTRUG00000008951	eif3c	99	75.620	Takifugu_rubripes
ENSMODG00000015579	-	100	74.755	ENSTNIG00000015210	eif3c	100	74.755	Tetraodon_nigroviridis
ENSMODG00000015579	-	100	94.639	ENSTTRG00000005880	-	100	94.639	Tursiops_truncatus
ENSMODG00000015579	-	71	97.381	ENSUAMG00000001127	-	91	99.045	Ursus_americanus
ENSMODG00000015579	-	100	95.186	ENSUMAG00000010927	-	100	95.186	Ursus_maritimus
ENSMODG00000015579	-	100	93.435	ENSVVUG00000025970	-	100	93.435	Vulpes_vulpes
ENSMODG00000015579	-	100	79.135	ENSXETG00000002941	eif3c	100	79.243	Xenopus_tropicalis
ENSMODG00000015579	-	100	76.190	ENSXMAG00000013796	eif3c	100	75.081	Xiphophorus_maculatus