EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMODG00000015729 (Gene tree)
Gene ID: -
Gene Symbol: LSM8
Alias: YJR022W
Full Name: LSM8 homolog%2C U6 small nuclear RNA associated
Gene Type: protein_coding
Species: Monodelphis_domestica
Status: putative
Strand: Plus strand
Length: 54030 bases
Position: chr8:174004536-174058565
Accession: 20471
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMODP00000019629	LSM	PF01423.22	1.2e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMODT00000019979	LSM8-201	336	-	ENSMODP00000019629	78 (aa)	-	F7B524

Gene Model

Click here to download ENSMODG00000015729's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMODG00000015729's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMODG00000015729	LSM8	96	86.667	ENSG00000128534	LSM8	97	86.667	Homo_sapiens
ENSMODG00000015729	LSM8	96	85.333	ENSAPOG00000008649	lsm8	76	85.333	Acanthochromis_polyacanthus
ENSMODG00000015729	LSM8	96	86.667	ENSAMEG00000001162	LSM8	76	86.667	Ailuropoda_melanoleuca
ENSMODG00000015729	LSM8	96	85.333	ENSACIG00000014694	lsm8	97	85.333	Amphilophus_citrinellus
ENSMODG00000015729	LSM8	96	85.333	ENSAOCG00000013926	lsm8	76	85.333	Amphiprion_ocellaris
ENSMODG00000015729	LSM8	96	85.333	ENSAPEG00000023502	lsm8	76	85.333	Amphiprion_percula
ENSMODG00000015729	LSM8	96	85.333	ENSATEG00000023432	lsm8	97	85.333	Anabas_testudineus
ENSMODG00000015729	LSM8	96	86.667	ENSAPLG00000005115	LSM8	74	86.667	Anas_platyrhynchos
ENSMODG00000015729	LSM8	96	86.667	ENSANAG00000027771	LSM8	97	83.784	Aotus_nancymaae
ENSMODG00000015729	LSM8	96	85.333	ENSACLG00000011253	lsm8	76	85.333	Astatotilapia_calliptera
ENSMODG00000015729	LSM8	96	86.667	ENSAMXG00000042902	lsm8	76	86.667	Astyanax_mexicanus
ENSMODG00000015729	LSM8	96	86.667	ENSBTAG00000012649	LSM8	76	86.667	Bos_taurus
ENSMODG00000015729	LSM8	79	61.290	WBGene00003082	lsm-8	63	61.290	Caenorhabditis_elegans
ENSMODG00000015729	LSM8	96	86.667	ENSCJAG00000046406	LSM8	97	83.784	Callithrix_jacchus
ENSMODG00000015729	LSM8	96	86.667	ENSCAFG00000016459	LSM8	74	86.667	Canis_familiaris
ENSMODG00000015729	LSM8	96	86.667	ENSCAFG00020007643	-	76	86.667	Canis_lupus_dingo
ENSMODG00000015729	LSM8	91	90.141	ENSCAFG00020012800	-	55	90.141	Canis_lupus_dingo
ENSMODG00000015729	LSM8	96	86.667	ENSCHIG00000014201	LSM8	78	86.667	Capra_hircus
ENSMODG00000015729	LSM8	96	86.667	ENSTSYG00000032434	LSM8	76	86.667	Carlito_syrichta
ENSMODG00000015729	LSM8	95	85.135	ENSCAPG00000008253	LSM8	97	85.135	Cavia_aperea
ENSMODG00000015729	LSM8	96	86.667	ENSCPOG00000035673	LSM8	76	86.667	Cavia_porcellus
ENSMODG00000015729	LSM8	96	86.667	ENSCCAG00000021329	LSM8	97	83.784	Cebus_capucinus
ENSMODG00000015729	LSM8	96	86.667	ENSCATG00000045302	LSM8	97	83.784	Cercocebus_atys
ENSMODG00000015729	LSM8	96	86.667	ENSCLAG00000003726	LSM8	76	86.667	Chinchilla_lanigera
ENSMODG00000015729	LSM8	96	84.000	ENSCSAG00000019007	-	76	84.000	Chlorocebus_sabaeus
ENSMODG00000015729	LSM8	96	86.667	ENSCSAG00000010802	-	76	86.667	Chlorocebus_sabaeus
ENSMODG00000015729	LSM8	96	86.667	ENSCPBG00000008154	LSM8	74	86.667	Chrysemys_picta_bellii
ENSMODG00000015729	LSM8	79	85.484	ENSCING00000024877	-	65	85.484	Ciona_intestinalis
ENSMODG00000015729	LSM8	96	86.667	ENSCANG00000040728	LSM8	97	83.784	Colobus_angolensis_palliatus
ENSMODG00000015729	LSM8	96	86.667	ENSCGRG00001000450	Lsm8	76	86.667	Cricetulus_griseus_chok1gshd
ENSMODG00000015729	LSM8	96	86.667	ENSCGRG00000005587	Lsm8	86	86.667	Cricetulus_griseus_crigri
ENSMODG00000015729	LSM8	92	83.333	ENSCSEG00000004164	lsm8	77	83.333	Cynoglossus_semilaevis
ENSMODG00000015729	LSM8	96	84.000	ENSCVAG00000020547	lsm8	76	84.000	Cyprinodon_variegatus
ENSMODG00000015729	LSM8	96	85.333	ENSDARG00000091656	lsm8	76	85.333	Danio_rerio
ENSMODG00000015729	LSM8	96	86.667	ENSDNOG00000034613	LSM8	76	86.667	Dasypus_novemcinctus
ENSMODG00000015729	LSM8	96	86.667	ENSDORG00000027868	Lsm8	76	86.667	Dipodomys_ordii
ENSMODG00000015729	LSM8	77	73.333	FBgn0035271	CG2021	63	73.333	Drosophila_melanogaster
ENSMODG00000015729	LSM8	96	86.667	ENSETEG00000011594	LSM8	76	86.667	Echinops_telfairi
ENSMODG00000015729	LSM8	92	83.333	ENSEBUG00000012017	lsm8	95	83.333	Eptatretus_burgeri
ENSMODG00000015729	LSM8	96	86.667	ENSECAG00000024025	LSM8	69	86.111	Equus_caballus
ENSMODG00000015729	LSM8	96	84.000	ENSELUG00000010138	lsm8	76	84.000	Esox_lucius
ENSMODG00000015729	LSM8	81	74.603	ENSFCAG00000044794	-	62	74.603	Felis_catus
ENSMODG00000015729	LSM8	96	86.667	ENSFCAG00000036620	-	76	86.667	Felis_catus
ENSMODG00000015729	LSM8	96	86.667	ENSFALG00000010023	LSM8	76	86.667	Ficedula_albicollis
ENSMODG00000015729	LSM8	96	86.667	ENSFDAG00000019530	LSM8	76	86.667	Fukomys_damarensis
ENSMODG00000015729	LSM8	96	85.333	ENSFHEG00000013729	lsm8	76	85.333	Fundulus_heteroclitus
ENSMODG00000015729	LSM8	96	86.667	ENSGALG00000009110	LSM8	76	86.667	Gallus_gallus
ENSMODG00000015729	LSM8	96	84.000	ENSGAFG00000001135	lsm8	76	84.000	Gambusia_affinis
ENSMODG00000015729	LSM8	96	86.667	ENSGAGG00000017366	LSM8	76	86.667	Gopherus_agassizii
ENSMODG00000015729	LSM8	96	86.667	ENSGGOG00000041883	LSM8	76	86.667	Gorilla_gorilla
ENSMODG00000015729	LSM8	96	85.333	ENSHBUG00000003646	lsm8	76	85.333	Haplochromis_burtoni
ENSMODG00000015729	LSM8	96	81.333	ENSHGLG00000019782	-	76	81.333	Heterocephalus_glaber_female
ENSMODG00000015729	LSM8	60	100.000	ENSHGLG00000001988	-	68	100.000	Heterocephalus_glaber_female
ENSMODG00000015729	LSM8	100	83.333	ENSHGLG00100003934	-	76	83.333	Heterocephalus_glaber_male
ENSMODG00000015729	LSM8	96	81.333	ENSHGLG00100012166	-	76	81.333	Heterocephalus_glaber_male
ENSMODG00000015729	LSM8	96	84.000	ENSHCOG00000005037	lsm8	76	84.000	Hippocampus_comes
ENSMODG00000015729	LSM8	96	86.667	ENSIPUG00000019811	NAA38	76	86.667	Ictalurus_punctatus
ENSMODG00000015729	LSM8	96	86.667	ENSSTOG00000009039	LSM8	68	95.238	Ictidomys_tridecemlineatus
ENSMODG00000015729	LSM8	81	88.889	ENSSTOG00000034801	-	58	88.889	Ictidomys_tridecemlineatus
ENSMODG00000015729	LSM8	96	86.667	ENSJJAG00000009031	Lsm8	75	86.667	Jaculus_jaculus
ENSMODG00000015729	LSM8	96	85.333	ENSKMAG00000018983	lsm8	76	85.333	Kryptolebias_marmoratus
ENSMODG00000015729	LSM8	81	98.413	ENSLACG00000010231	LSM8	66	98.413	Latimeria_chalumnae
ENSMODG00000015729	LSM8	96	85.333	ENSLOCG00000015580	lsm8	76	85.333	Lepisosteus_oculatus
ENSMODG00000015729	LSM8	96	86.667	ENSLAFG00000011242	LSM8	75	86.667	Loxodonta_africana
ENSMODG00000015729	LSM8	96	82.667	ENSMFAG00000013044	-	76	82.667	Macaca_fascicularis
ENSMODG00000015729	LSM8	96	86.667	ENSMFAG00000035798	LSM8	97	83.784	Macaca_fascicularis
ENSMODG00000015729	LSM8	81	100.000	ENSMMUG00000046401	LSM8	97	83.784	Macaca_mulatta
ENSMODG00000015729	LSM8	96	82.667	ENSMNEG00000011141	-	97	82.667	Macaca_nemestrina
ENSMODG00000015729	LSM8	96	86.667	ENSMNEG00000036764	-	97	83.784	Macaca_nemestrina
ENSMODG00000015729	LSM8	96	72.000	ENSMLEG00000039324	-	74	72.000	Mandrillus_leucophaeus
ENSMODG00000015729	LSM8	96	86.667	ENSMLEG00000035828	-	97	83.784	Mandrillus_leucophaeus
ENSMODG00000015729	LSM8	96	85.333	ENSMAMG00000018839	lsm8	97	85.333	Mastacembelus_armatus
ENSMODG00000015729	LSM8	96	85.333	ENSMZEG00005019138	lsm8	76	85.333	Maylandia_zebra
ENSMODG00000015729	LSM8	96	86.667	ENSMGAG00000008808	LSM8	76	86.667	Meleagris_gallopavo
ENSMODG00000015729	LSM8	81	77.778	ENSMAUG00000015356	-	61	77.778	Mesocricetus_auratus
ENSMODG00000015729	LSM8	81	100.000	ENSMAUG00000015721	-	66	100.000	Mesocricetus_auratus
ENSMODG00000015729	LSM8	92	80.556	ENSMAUG00000020287	-	95	80.556	Mesocricetus_auratus
ENSMODG00000015729	LSM8	96	86.667	ENSMICG00000042730	LSM8	76	86.667	Microcebus_murinus
ENSMODG00000015729	LSM8	96	86.667	ENSMOCG00000001688	Lsm8	76	86.667	Microtus_ochrogaster
ENSMODG00000015729	LSM8	96	85.333	ENSMMOG00000006046	lsm8	97	85.333	Mola_mola
ENSMODG00000015729	LSM8	96	85.333	ENSMALG00000000405	lsm8	76	85.333	Monopterus_albus
ENSMODG00000015729	LSM8	96	86.667	MGP_CAROLIEiJ_G0028125	-	76	86.667	Mus_caroli
ENSMODG00000015729	LSM8	96	86.667	ENSMUSG00000044155	Lsm8	76	86.667	Mus_musculus
ENSMODG00000015729	LSM8	96	86.667	MGP_PahariEiJ_G0021881	Lsm8	97	86.667	Mus_pahari
ENSMODG00000015729	LSM8	96	86.667	MGP_SPRETEiJ_G0029125	-	76	86.667	Mus_spretus
ENSMODG00000015729	LSM8	96	85.333	ENSMLUG00000027762	-	76	85.333	Myotis_lucifugus
ENSMODG00000015729	LSM8	96	86.667	ENSMLUG00000006837	-	76	86.667	Myotis_lucifugus
ENSMODG00000015729	LSM8	96	86.667	ENSNGAG00000016554	Lsm8	76	86.667	Nannospalax_galili
ENSMODG00000015729	LSM8	96	85.333	ENSNBRG00000014441	lsm8	76	85.333	Neolamprologus_brichardi
ENSMODG00000015729	LSM8	96	86.667	ENSNLEG00000011768	LSM8	76	86.667	Nomascus_leucogenys
ENSMODG00000015729	LSM8	96	73.333	ENSMEUG00000007801	LSM8	76	73.333	Notamacropus_eugenii
ENSMODG00000015729	LSM8	96	86.667	ENSOPRG00000014809	LSM8	86	86.667	Ochotona_princeps
ENSMODG00000015729	LSM8	96	86.667	ENSODEG00000000418	-	76	86.667	Octodon_degus
ENSMODG00000015729	LSM8	79	83.871	ENSODEG00000020290	-	72	83.871	Octodon_degus
ENSMODG00000015729	LSM8	96	86.667	ENSOANG00000014536	LSM8	76	86.667	Ornithorhynchus_anatinus
ENSMODG00000015729	LSM8	96	86.667	ENSOCUG00000017359	LSM8	75	86.667	Oryctolagus_cuniculus
ENSMODG00000015729	LSM8	92	84.722	ENSORLG00000017432	lsm8	74	84.722	Oryzias_latipes
ENSMODG00000015729	LSM8	92	84.722	ENSORLG00020004376	lsm8	74	84.722	Oryzias_latipes_hni
ENSMODG00000015729	LSM8	96	85.333	ENSORLG00015003757	lsm8	76	85.333	Oryzias_latipes_hsok
ENSMODG00000015729	LSM8	88	84.058	ENSOMEG00000022509	lsm8	81	81.333	Oryzias_melastigma
ENSMODG00000015729	LSM8	96	86.667	ENSOGAG00000013377	LSM8	76	86.667	Otolemur_garnettii
ENSMODG00000015729	LSM8	96	86.667	ENSOARG00000017974	LSM8	76	86.667	Ovis_aries
ENSMODG00000015729	LSM8	96	86.667	ENSPPAG00000043228	-	97	86.667	Pan_paniscus
ENSMODG00000015729	LSM8	96	86.667	ENSPPRG00000006444	LSM8	76	86.667	Panthera_pardus
ENSMODG00000015729	LSM8	96	86.667	ENSPTIG00000004722	LSM8	65	97.872	Panthera_tigris_altaica
ENSMODG00000015729	LSM8	96	86.667	ENSPTRG00000046596	-	97	86.667	Pan_troglodytes
ENSMODG00000015729	LSM8	81	96.825	ENSPANG00000019395	-	66	96.825	Papio_anubis
ENSMODG00000015729	LSM8	96	86.667	ENSPANG00000035470	-	97	83.784	Papio_anubis
ENSMODG00000015729	LSM8	96	85.333	ENSPKIG00000006092	lsm8	74	85.333	Paramormyrops_kingsleyae
ENSMODG00000015729	LSM8	96	86.667	ENSPSIG00000017054	LSM8	97	86.667	Pelodiscus_sinensis
ENSMODG00000015729	LSM8	96	85.333	ENSPMGG00000016442	lsm8	97	85.333	Periophthalmus_magnuspinnatus
ENSMODG00000015729	LSM8	79	96.774	ENSPEMG00000009153	Lsm8	84	96.774	Peromyscus_maniculatus_bairdii
ENSMODG00000015729	LSM8	94	89.041	ENSPCIG00000021467	LSM8	75	89.041	Phascolarctos_cinereus
ENSMODG00000015729	LSM8	96	84.000	ENSPFOG00000012340	lsm8	76	84.000	Poecilia_formosa
ENSMODG00000015729	LSM8	96	84.000	ENSPLAG00000000516	lsm8	76	84.000	Poecilia_latipinna
ENSMODG00000015729	LSM8	96	84.000	ENSPMEG00000022567	lsm8	76	84.000	Poecilia_mexicana
ENSMODG00000015729	LSM8	78	83.824	ENSPREG00000005527	lsm8	61	83.824	Poecilia_reticulata
ENSMODG00000015729	LSM8	96	86.667	ENSPPYG00000017942	LSM8	76	86.667	Pongo_abelii
ENSMODG00000015729	LSM8	94	65.753	ENSPCOG00000017982	-	71	65.753	Propithecus_coquereli
ENSMODG00000015729	LSM8	96	86.667	ENSPCOG00000003309	-	76	86.667	Propithecus_coquereli
ENSMODG00000015729	LSM8	96	85.333	ENSPVAG00000000990	LSM8	86	85.333	Pteropus_vampyrus
ENSMODG00000015729	LSM8	96	85.333	ENSPNYG00000011448	lsm8	76	85.333	Pundamilia_nyererei
ENSMODG00000015729	LSM8	96	86.667	ENSPNAG00000010252	lsm8	76	86.667	Pygocentrus_nattereri
ENSMODG00000015729	LSM8	96	86.667	ENSRNOG00000058677	Lsm8	76	86.667	Rattus_norvegicus
ENSMODG00000015729	LSM8	96	86.667	ENSRBIG00000032851	LSM8	97	83.784	Rhinopithecus_bieti
ENSMODG00000015729	LSM8	96	86.667	ENSRROG00000039618	LSM8	97	83.784	Rhinopithecus_roxellana
ENSMODG00000015729	LSM8	96	86.667	ENSSBOG00000023223	LSM8	97	83.784	Saimiri_boliviensis_boliviensis
ENSMODG00000015729	LSM8	96	86.667	ENSSHAG00000018435	-	76	86.667	Sarcophilus_harrisii
ENSMODG00000015729	LSM8	96	84.000	ENSSFOG00015004412	lsm8	76	84.000	Scleropages_formosus
ENSMODG00000015729	LSM8	96	84.000	ENSSMAG00000009458	lsm8	97	84.000	Scophthalmus_maximus
ENSMODG00000015729	LSM8	96	85.333	ENSSDUG00000014702	lsm8	76	85.333	Seriola_dumerili
ENSMODG00000015729	LSM8	96	85.333	ENSSLDG00000016870	lsm8	97	85.333	Seriola_lalandi_dorsalis
ENSMODG00000015729	LSM8	77	100.000	ENSSARG00000009628	-	83	100.000	Sorex_araneus
ENSMODG00000015729	LSM8	96	86.667	ENSSPUG00000017419	LSM8	76	86.667	Sphenodon_punctatus
ENSMODG00000015729	LSM8	96	85.333	ENSSPAG00000021422	lsm8	76	85.333	Stegastes_partitus
ENSMODG00000015729	LSM8	96	86.667	ENSSSCG00000021652	LSM8	76	86.667	Sus_scrofa
ENSMODG00000015729	LSM8	96	86.667	ENSTGUG00000004730	-	76	86.667	Taeniopygia_guttata
ENSMODG00000015729	LSM8	96	85.333	ENSTGUG00000016823	-	76	85.333	Taeniopygia_guttata
ENSMODG00000015729	LSM8	96	85.333	ENSTRUG00000025192	lsm8	76	85.333	Takifugu_rubripes
ENSMODG00000015729	LSM8	96	85.333	ENSTNIG00000002864	lsm8	76	85.333	Tetraodon_nigroviridis
ENSMODG00000015729	LSM8	96	86.667	ENSTTRG00000001023	LSM8	76	86.667	Tursiops_truncatus
ENSMODG00000015729	LSM8	96	86.667	ENSUAMG00000006943	-	76	86.667	Ursus_americanus
ENSMODG00000015729	LSM8	96	86.667	ENSUMAG00000003073	LSM8	78	86.667	Ursus_maritimus
ENSMODG00000015729	LSM8	96	86.667	ENSVPAG00000001530	LSM8	76	86.667	Vicugna_pacos
ENSMODG00000015729	LSM8	81	98.413	ENSVVUG00000013248	-	69	98.413	Vulpes_vulpes
ENSMODG00000015729	LSM8	96	86.667	ENSXETG00000021829	lsm8	75	86.667	Xenopus_tropicalis
ENSMODG00000015729	LSM8	96	82.667	ENSXCOG00000012938	lsm8	77	82.667	Xiphophorus_couchianus
ENSMODG00000015729	LSM8	96	84.000	ENSXMAG00000025919	lsm8	76	84.000	Xiphophorus_maculatus