EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMODG00000016188 (Gene tree)
Gene ID: 100010478
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Monodelphis_domestica
Status: putative
Strand: Minus strand
Length: 144629 bases
Position: chr6:155524426-155669054
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMODP00000027694	zf-CCCH	PF00642.24	1e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMODT00000029232	-	2217	-	ENSMODP00000027694	738 (aa)	-	F6PY56

Gene Model

Click here to download ENSMODG00000016188's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMODG00000016188's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMODG00000016188	-	93	50.270	ENSMODG00000007684	UNK	75	48.262

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMODG00000016188	-	90	77.113	ENSG00000059145	UNKL	100	73.913	Homo_sapiens
ENSMODG00000016188	-	94	66.803	ENSAPOG00000023784	unkl	82	93.548	Acanthochromis_polyacanthus
ENSMODG00000016188	-	75	93.548	ENSACIG00000023268	unkl	81	93.548	Amphilophus_citrinellus
ENSMODG00000016188	-	94	67.077	ENSAOCG00000022845	unkl	82	93.088	Amphiprion_ocellaris
ENSMODG00000016188	-	78	89.778	ENSAPEG00000011709	unkl	85	89.778	Amphiprion_percula
ENSMODG00000016188	-	94	66.667	ENSATEG00000004328	unkl	86	85.484	Anabas_testudineus
ENSMODG00000016188	-	77	90.278	ENSAPLG00000016186	-	89	67.710	Anas_platyrhynchos
ENSMODG00000016188	-	94	61.241	ENSANAG00000021942	-	90	60.828	Aotus_nancymaae
ENSMODG00000016188	-	76	93.088	ENSACLG00000006189	unkl	84	93.088	Astatotilapia_calliptera
ENSMODG00000016188	-	77	88.608	ENSAMXG00000007890	unkl	87	86.777	Astyanax_mexicanus
ENSMODG00000016188	-	94	62.197	ENSBTAG00000014126	-	96	63.172	Bos_taurus
ENSMODG00000016188	-	92	72.202	ENSCJAG00000013151	-	86	73.978	Callithrix_jacchus
ENSMODG00000016188	-	94	62.448	ENSCAFG00000019581	UNKL	87	62.621	Canis_familiaris
ENSMODG00000016188	-	78	92.593	ENSCAFG00020001284	-	85	92.593	Canis_lupus_dingo
ENSMODG00000016188	-	94	52.564	ENSTSYG00000033619	-	87	79.422	Carlito_syrichta
ENSMODG00000016188	-	78	85.654	ENSCAPG00000014785	-	92	85.654	Cavia_aperea
ENSMODG00000016188	-	94	63.075	ENSCPOG00000011846	-	87	77.256	Cavia_porcellus
ENSMODG00000016188	-	94	63.172	ENSCCAG00000022808	-	87	62.069	Cebus_capucinus
ENSMODG00000016188	-	93	76.761	ENSCATG00000033183	-	87	63.448	Cercocebus_atys
ENSMODG00000016188	-	94	63.506	ENSCLAG00000015420	-	100	63.017	Chinchilla_lanigera
ENSMODG00000016188	-	90	76.761	ENSCSAG00000011709	-	87	63.448	Chlorocebus_sabaeus
ENSMODG00000016188	-	93	79.889	ENSCPBG00000002794	-	88	80.815	Chrysemys_picta_bellii
ENSMODG00000016188	-	94	61.318	ENSCANG00000036315	-	100	78.339	Colobus_angolensis_palliatus
ENSMODG00000016188	-	94	64.907	ENSCGRG00001014153	Unkl	87	65.789	Cricetulus_griseus_chok1gshd
ENSMODG00000016188	-	94	64.907	ENSCGRG00000010384	Unkl	90	65.789	Cricetulus_griseus_crigri
ENSMODG00000016188	-	77	94.009	ENSCSEG00000010415	unkl	85	82.879	Cynoglossus_semilaevis
ENSMODG00000016188	-	76	89.083	ENSCVAG00000015910	unkl	85	85.366	Cyprinodon_variegatus
ENSMODG00000016188	-	94	70.285	ENSDARG00000037838	unkl	89	70.163	Danio_rerio
ENSMODG00000016188	-	93	74.286	ENSDORG00000015663	Unkl	91	90.000	Dipodomys_ordii
ENSMODG00000016188	-	81	89.545	ENSEASG00005000274	-	85	89.545	Equus_asinus_asinus
ENSMODG00000016188	-	83	81.181	ENSECAG00000010641	UNKL	100	74.586	Equus_caballus
ENSMODG00000016188	-	94	69.844	ENSELUG00000021446	unkl	88	71.795	Esox_lucius
ENSMODG00000016188	-	89	74.643	ENSFCAG00000010643	-	85	48.645	Felis_catus
ENSMODG00000016188	-	76	91.518	ENSFHEG00000002811	unkl	87	87.552	Fundulus_heteroclitus
ENSMODG00000016188	-	94	77.666	ENSGALG00000043765	-	96	78.098	Gallus_gallus
ENSMODG00000016188	-	84	78.182	ENSGAFG00000017960	unkl	89	66.576	Gambusia_affinis
ENSMODG00000016188	-	93	83.188	ENSGAGG00000023664	-	87	83.188	Gopherus_agassizii
ENSMODG00000016188	-	94	61.878	ENSGGOG00000014915	-	87	62.897	Gorilla_gorilla
ENSMODG00000016188	-	76	93.088	ENSHBUG00000003486	unkl	84	93.088	Haplochromis_burtoni
ENSMODG00000016188	-	94	64.511	ENSHGLG00000001586	-	87	64.799	Heterocephalus_glaber_female
ENSMODG00000016188	-	94	64.511	ENSHGLG00100007463	-	90	64.799	Heterocephalus_glaber_male
ENSMODG00000016188	-	90	80.451	ENSHCOG00000015734	unkl	87	85.366	Hippocampus_comes
ENSMODG00000016188	-	94	69.891	ENSIPUG00000019510	unkl	87	84.047	Ictalurus_punctatus
ENSMODG00000016188	-	91	80.669	ENSSTOG00000003487	-	90	80.669	Ictidomys_tridecemlineatus
ENSMODG00000016188	-	77	90.667	ENSJJAG00000011047	Unkl	85	90.667	Jaculus_jaculus
ENSMODG00000016188	-	76	93.056	ENSKMAG00000018810	unkl	84	93.056	Kryptolebias_marmoratus
ENSMODG00000016188	-	94	58.547	ENSLBEG00000023912	unkl	82	88.940	Labrus_bergylta
ENSMODG00000016188	-	93	64.507	ENSLACG00000009285	unkl	100	64.507	Latimeria_chalumnae
ENSMODG00000016188	-	94	70.845	ENSLOCG00000003648	unkl	83	84.959	Lepisosteus_oculatus
ENSMODG00000016188	-	94	60.142	ENSLAFG00000018262	-	87	79.061	Loxodonta_africana
ENSMODG00000016188	-	93	76.761	ENSMMUG00000012440	-	87	77.978	Macaca_mulatta
ENSMODG00000016188	-	90	76.761	ENSMNEG00000036131	-	87	63.448	Macaca_nemestrina
ENSMODG00000016188	-	90	76.408	ENSMLEG00000037946	-	89	53.793	Mandrillus_leucophaeus
ENSMODG00000016188	-	77	93.088	ENSMAMG00000002709	unkl	86	90.135	Mastacembelus_armatus
ENSMODG00000016188	-	76	93.088	ENSMZEG00005022469	unkl	84	93.088	Maylandia_zebra
ENSMODG00000016188	-	94	71.138	ENSMGAG00000006920	UNKL	91	70.325	Meleagris_gallopavo
ENSMODG00000016188	-	94	64.622	ENSMAUG00000016281	Unkl	87	65.789	Mesocricetus_auratus
ENSMODG00000016188	-	94	56.966	ENSMICG00000007141	-	82	74.194	Microcebus_murinus
ENSMODG00000016188	-	94	64.907	ENSMOCG00000011424	Unkl	87	65.374	Microtus_ochrogaster
ENSMODG00000016188	-	94	57.328	ENSMMOG00000014848	unkl	82	94.009	Mola_mola
ENSMODG00000016188	-	94	65.984	ENSMALG00000020837	unkl	89	67.439	Monopterus_albus
ENSMODG00000016188	-	94	64.194	MGP_CAROLIEiJ_G0021225	Unkl	100	61.076	Mus_caroli
ENSMODG00000016188	-	94	64.194	ENSMUSG00000015127	Unkl	100	61.076	Mus_musculus
ENSMODG00000016188	-	94	63.766	MGP_PahariEiJ_G0023543	Unkl	87	65.235	Mus_pahari
ENSMODG00000016188	-	94	64.194	MGP_SPRETEiJ_G0022136	Unkl	100	61.076	Mus_spretus
ENSMODG00000016188	-	88	73.776	ENSMPUG00000015653	-	97	74.910	Mustela_putorius_furo
ENSMODG00000016188	-	93	63.351	ENSMLUG00000011207	-	100	62.892	Myotis_lucifugus
ENSMODG00000016188	-	88	79.225	ENSNGAG00000002821	Unkl	87	66.207	Nannospalax_galili
ENSMODG00000016188	-	94	75.000	ENSNBRG00000015104	unkl	80	93.088	Neolamprologus_brichardi
ENSMODG00000016188	-	94	61.831	ENSNLEG00000008624	-	88	63.724	Nomascus_leucogenys
ENSMODG00000016188	-	94	63.649	ENSODEG00000017747	-	87	77.256	Octodon_degus
ENSMODG00000016188	-	94	64.926	ENSONIG00000001411	unkl	89	65.863	Oreochromis_niloticus
ENSMODG00000016188	-	81	84.064	ENSORLG00000005070	unkl	85	82.879	Oryzias_latipes
ENSMODG00000016188	-	81	84.064	ENSORLG00020005376	unkl	85	82.879	Oryzias_latipes_hni
ENSMODG00000016188	-	81	83.665	ENSORLG00015018545	unkl	85	82.490	Oryzias_latipes_hsok
ENSMODG00000016188	-	79	90.179	ENSOMEG00000023985	unkl	85	90.179	Oryzias_melastigma
ENSMODG00000016188	-	90	76.761	ENSPPAG00000043365	-	100	77.978	Pan_paniscus
ENSMODG00000016188	-	91	59.104	ENSPPRG00000018472	-	88	47.250	Panthera_pardus
ENSMODG00000016188	-	60	90.741	ENSPTIG00000000863	-	75	90.741	Panthera_tigris_altaica
ENSMODG00000016188	-	90	77.113	ENSPTRG00000007591	UNKL	87	78.339	Pan_troglodytes
ENSMODG00000016188	-	90	76.408	ENSPANG00000015754	-	87	63.586	Papio_anubis
ENSMODG00000016188	-	97	66.184	ENSPKIG00000002101	unkl	100	66.974	Paramormyrops_kingsleyae
ENSMODG00000016188	-	80	80.709	ENSPKIG00000006764	-	100	77.070	Paramormyrops_kingsleyae
ENSMODG00000016188	-	66	71.650	ENSPSIG00000011268	-	100	71.023	Pelodiscus_sinensis
ENSMODG00000016188	-	79	89.868	ENSPMGG00000020856	unkl	84	89.868	Periophthalmus_magnuspinnatus
ENSMODG00000016188	-	94	64.479	ENSPEMG00000008937	Unkl	87	64.194	Peromyscus_maniculatus_bairdii
ENSMODG00000016188	-	94	94.207	ENSPCIG00000015633	-	99	93.956	Phascolarctos_cinereus
ENSMODG00000016188	-	94	64.891	ENSPFOG00000010836	unkl	89	66.213	Poecilia_formosa
ENSMODG00000016188	-	82	79.422	ENSPLAG00000002294	unkl	84	82.490	Poecilia_latipinna
ENSMODG00000016188	-	82	78.182	ENSPMEG00000019000	unkl	84	82.490	Poecilia_mexicana
ENSMODG00000016188	-	76	92.166	ENSPREG00000007918	unkl	87	82.101	Poecilia_reticulata
ENSMODG00000016188	-	93	72.183	ENSPPYG00000006950	-	89	73.285	Pongo_abelii
ENSMODG00000016188	-	94	61.158	ENSPCOG00000017889	-	87	61.735	Propithecus_coquereli
ENSMODG00000016188	-	75	93.548	ENSPNYG00000008111	unkl	85	93.548	Pundamilia_nyererei
ENSMODG00000016188	-	79	89.167	ENSPNAG00000010422	unkl	87	89.167	Pygocentrus_nattereri
ENSMODG00000016188	-	94	64.337	ENSRNOG00000054605	Unkl	87	65.789	Rattus_norvegicus
ENSMODG00000016188	-	94	56.980	ENSRBIG00000040235	-	86	56.553	Rhinopithecus_bieti
ENSMODG00000016188	-	94	63.724	ENSRROG00000029341	-	90	63.724	Rhinopithecus_roxellana
ENSMODG00000016188	-	94	63.172	ENSSBOG00000031173	-	90	62.897	Saimiri_boliviensis_boliviensis
ENSMODG00000016188	-	94	94.483	ENSSHAG00000008411	-	90	94.483	Sarcophilus_harrisii
ENSMODG00000016188	-	94	64.441	ENSSFOG00015018904	unkl	93	62.807	Scleropages_formosus
ENSMODG00000016188	-	78	87.552	ENSSMAG00000005106	unkl	87	87.552	Scophthalmus_maximus
ENSMODG00000016188	-	94	66.441	ENSSDUG00000019045	unkl	87	82.879	Seriola_dumerili
ENSMODG00000016188	-	94	67.213	ENSSLDG00000010672	unkl	87	82.879	Seriola_lalandi_dorsalis
ENSMODG00000016188	-	87	79.111	ENSSPUG00000009763	-	87	80.475	Sphenodon_punctatus
ENSMODG00000016188	-	94	67.350	ENSSPAG00000017109	unkl	81	93.548	Stegastes_partitus
ENSMODG00000016188	-	94	64.738	ENSSSCG00000022963	-	87	70.427	Sus_scrofa
ENSMODG00000016188	-	83	79.487	ENSTRUG00000012086	unkl	84	82.101	Takifugu_rubripes
ENSMODG00000016188	-	94	62.144	ENSTNIG00000018588	unkl	89	62.687	Tetraodon_nigroviridis
ENSMODG00000016188	-	67	88.550	ENSVVUG00000011182	-	80	88.550	Vulpes_vulpes
ENSMODG00000016188	-	82	77.818	ENSXCOG00000016491	unkl	84	82.490	Xiphophorus_couchianus
ENSMODG00000016188	-	82	77.818	ENSXMAG00000009520	unkl	84	82.490	Xiphophorus_maculatus