EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMODG00000016348 (Gene tree)
Gene ID: 100015020
Gene Symbol: TNRC6A
Alias: CAGH26|GW182|KIAA1460|TNRC6
Full Name: trinucleotide repeat containing 6A
Gene Type: protein_coding
Species: Monodelphis_domestica
Status: putative
Strand: Plus strand
Length: 304145 bases
Position: chr6:145136768-145440912
Accession: 11969
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMODP00000020434	Ago_hook	PF10427.9	2e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMODT00000020794	TNRC6A-201	9294	-	ENSMODP00000020434	1998 (aa)	-	F7F790

Gene Model

Click here to download ENSMODG00000016348's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMODG00000016348's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMODG00000016348	TNRC6A	96	43.707	ENSMODG00000001785	TNRC6C	99	43.567

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMODG00000016348	TNRC6A	99	81.805	ENSG00000090905	TNRC6A	100	81.183	Homo_sapiens
ENSMODG00000016348	TNRC6A	96	82.449	ENSAMEG00000009333	TNRC6A	99	82.185	Ailuropoda_melanoleuca
ENSMODG00000016348	TNRC6A	96	85.322	ENSAPLG00000009978	TNRC6A	100	85.226	Anas_platyrhynchos
ENSMODG00000016348	TNRC6A	99	54.475	ENSACAG00000011857	TNRC6A	99	55.969	Anolis_carolinensis
ENSMODG00000016348	TNRC6A	99	81.710	ENSANAG00000025252	TNRC6A	99	80.567	Aotus_nancymaae
ENSMODG00000016348	TNRC6A	90	57.364	ENSAMXG00000019919	tnrc6a	100	57.273	Astyanax_mexicanus
ENSMODG00000016348	TNRC6A	99	79.532	ENSBTAG00000017999	TNRC6A	99	81.757	Bos_taurus
ENSMODG00000016348	TNRC6A	99	81.315	ENSCJAG00000020677	TNRC6A	99	80.376	Callithrix_jacchus
ENSMODG00000016348	TNRC6A	99	82.423	ENSCAFG00000017531	TNRC6A	100	81.281	Canis_familiaris
ENSMODG00000016348	TNRC6A	96	81.342	ENSCAFG00020021160	TNRC6A	99	81.627	Canis_lupus_dingo
ENSMODG00000016348	TNRC6A	99	79.582	ENSCHIG00000019448	TNRC6A	99	79.301	Capra_hircus
ENSMODG00000016348	TNRC6A	99	81.470	ENSTSYG00000012711	TNRC6A	99	81.548	Carlito_syrichta
ENSMODG00000016348	TNRC6A	99	79.770	ENSCPOG00000036684	TNRC6A	100	78.871	Cavia_porcellus
ENSMODG00000016348	TNRC6A	99	81.728	ENSCCAG00000033664	TNRC6A	99	81.767	Cebus_capucinus
ENSMODG00000016348	TNRC6A	96	80.923	ENSCATG00000019284	TNRC6A	97	80.822	Cercocebus_atys
ENSMODG00000016348	TNRC6A	99	76.006	ENSCLAG00000010217	TNRC6A	99	75.161	Chinchilla_lanigera
ENSMODG00000016348	TNRC6A	99	81.935	ENSCSAG00000006561	TNRC6A	99	80.794	Chlorocebus_sabaeus
ENSMODG00000016348	TNRC6A	94	81.016	ENSCHOG00000009374	TNRC6A	95	80.816	Choloepus_hoffmanni
ENSMODG00000016348	TNRC6A	90	83.435	ENSCPBG00000001881	TNRC6A	100	83.324	Chrysemys_picta_bellii
ENSMODG00000016348	TNRC6A	99	82.067	ENSCANG00000041549	TNRC6A	99	80.924	Colobus_angolensis_palliatus
ENSMODG00000016348	TNRC6A	99	78.486	ENSCGRG00001015021	Tnrc6a	99	81.096	Cricetulus_griseus_chok1gshd
ENSMODG00000016348	TNRC6A	99	77.601	ENSCGRG00000013351	Tnrc6a	99	77.003	Cricetulus_griseus_crigri
ENSMODG00000016348	TNRC6A	90	58.526	ENSDARG00000079688	tnrc6a	100	58.490	Danio_rerio
ENSMODG00000016348	TNRC6A	96	81.664	ENSDNOG00000013989	TNRC6A	99	81.356	Dasypus_novemcinctus
ENSMODG00000016348	TNRC6A	96	74.205	ENSETEG00000014658	TNRC6A	99	74.103	Echinops_telfairi
ENSMODG00000016348	TNRC6A	99	81.913	ENSEASG00005017693	TNRC6A	99	82.024	Equus_asinus_asinus
ENSMODG00000016348	TNRC6A	99	82.214	ENSECAG00000025056	TNRC6A	99	82.163	Equus_caballus
ENSMODG00000016348	TNRC6A	96	76.504	ENSEEUG00000004530	TNRC6A	99	76.300	Erinaceus_europaeus
ENSMODG00000016348	TNRC6A	99	82.141	ENSFCAG00000025236	TNRC6A	99	81.679	Felis_catus
ENSMODG00000016348	TNRC6A	99	84.343	ENSFALG00000003757	TNRC6A	99	84.293	Ficedula_albicollis
ENSMODG00000016348	TNRC6A	90	84.628	ENSGALG00000006068	TNRC6A	100	84.351	Gallus_gallus
ENSMODG00000016348	TNRC6A	90	82.946	ENSGAGG00000023209	TNRC6A	100	82.835	Gopherus_agassizii
ENSMODG00000016348	TNRC6A	97	82.087	ENSGGOG00000005137	TNRC6A	99	81.438	Gorilla_gorilla
ENSMODG00000016348	TNRC6A	98	78.183	ENSHGLG00000012474	-	100	77.307	Heterocephalus_glaber_female
ENSMODG00000016348	TNRC6A	93	62.626	ENSHGLG00000007368	-	93	62.447	Heterocephalus_glaber_female
ENSMODG00000016348	TNRC6A	98	78.812	ENSHGLG00100012496	-	100	77.979	Heterocephalus_glaber_male
ENSMODG00000016348	TNRC6A	99	81.272	ENSSTOG00000023394	TNRC6A	99	80.229	Ictidomys_tridecemlineatus
ENSMODG00000016348	TNRC6A	96	72.410	ENSLACG00000006277	TNRC6A	100	72.462	Latimeria_chalumnae
ENSMODG00000016348	TNRC6A	99	80.167	ENSLOCG00000005517	tnrc6a	94	79.332	Lepisosteus_oculatus
ENSMODG00000016348	TNRC6A	96	79.928	ENSLAFG00000004209	TNRC6A	99	79.918	Loxodonta_africana
ENSMODG00000016348	TNRC6A	96	81.056	ENSMFAG00000003824	TNRC6A	99	80.904	Macaca_fascicularis
ENSMODG00000016348	TNRC6A	99	82.166	ENSMMUG00000020428	TNRC6A	99	80.974	Macaca_mulatta
ENSMODG00000016348	TNRC6A	99	81.710	ENSMNEG00000034854	TNRC6A	99	80.945	Macaca_nemestrina
ENSMODG00000016348	TNRC6A	99	78.873	ENSMLEG00000042737	TNRC6A	97	80.617	Mandrillus_leucophaeus
ENSMODG00000016348	TNRC6A	99	82.254	ENSMGAG00000006455	TNRC6A	99	82.065	Meleagris_gallopavo
ENSMODG00000016348	TNRC6A	99	78.593	ENSMAUG00000012750	Tnrc6a	99	77.994	Mesocricetus_auratus
ENSMODG00000016348	TNRC6A	99	82.152	ENSMICG00000030685	TNRC6A	99	82.101	Microcebus_murinus
ENSMODG00000016348	TNRC6A	99	79.321	ENSMOCG00000000152	Tnrc6a	99	78.372	Microtus_ochrogaster
ENSMODG00000016348	TNRC6A	97	78.521	MGP_CAROLIEiJ_G0030425	Tnrc6a	100	83.672	Mus_caroli
ENSMODG00000016348	TNRC6A	99	78.422	ENSMUSG00000052707	Tnrc6a	99	83.952	Mus_musculus
ENSMODG00000016348	TNRC6A	97	78.676	MGP_PahariEiJ_G0013635	Tnrc6a	100	83.952	Mus_pahari
ENSMODG00000016348	TNRC6A	99	80.600	MGP_SPRETEiJ_G0031539	Tnrc6a	100	83.602	Mus_spretus
ENSMODG00000016348	TNRC6A	96	73.319	ENSMPUG00000012324	TNRC6A	100	73.111	Mustela_putorius_furo
ENSMODG00000016348	TNRC6A	96	80.340	ENSMLUG00000002701	TNRC6A	100	80.031	Myotis_lucifugus
ENSMODG00000016348	TNRC6A	99	79.163	ENSNGAG00000020702	Tnrc6a	100	78.265	Nannospalax_galili
ENSMODG00000016348	TNRC6A	96	80.245	ENSNLEG00000011851	TNRC6A	98	80.041	Nomascus_leucogenys
ENSMODG00000016348	TNRC6A	76	95.000	ENSMEUG00000015959	-	77	95.000	Notamacropus_eugenii
ENSMODG00000016348	TNRC6A	94	84.014	ENSOPRG00000005819	TNRC6A	96	82.993	Ochotona_princeps
ENSMODG00000016348	TNRC6A	98	75.327	ENSODEG00000012802	TNRC6A	97	75.878	Octodon_degus
ENSMODG00000016348	TNRC6A	86	86.774	ENSOANG00000007672	TNRC6A	100	86.601	Ornithorhynchus_anatinus
ENSMODG00000016348	TNRC6A	96	81.111	ENSOCUG00000004325	TNRC6A	100	80.747	Oryctolagus_cuniculus
ENSMODG00000016348	TNRC6A	97	82.720	ENSOGAG00000006666	TNRC6A	98	82.335	Otolemur_garnettii
ENSMODG00000016348	TNRC6A	97	81.718	ENSOARG00000017950	TNRC6A	98	81.292	Ovis_aries
ENSMODG00000016348	TNRC6A	99	81.593	ENSPPAG00000028379	TNRC6A	100	80.455	Pan_paniscus
ENSMODG00000016348	TNRC6A	99	81.741	ENSPPRG00000005861	TNRC6A	99	80.597	Panthera_pardus
ENSMODG00000016348	TNRC6A	99	81.309	ENSPTIG00000006346	TNRC6A	99	80.218	Panthera_tigris_altaica
ENSMODG00000016348	TNRC6A	96	81.647	ENSPTRG00000007898	TNRC6A	99	81.342	Pan_troglodytes
ENSMODG00000016348	TNRC6A	99	79.505	ENSPANG00000018523	TNRC6A	99	78.880	Papio_anubis
ENSMODG00000016348	TNRC6A	85	80.000	ENSPKIG00000012859	tnrc6a	99	80.000	Paramormyrops_kingsleyae
ENSMODG00000016348	TNRC6A	76	76.913	ENSPSIG00000003965	TNRC6A	100	76.783	Pelodiscus_sinensis
ENSMODG00000016348	TNRC6A	99	78.932	ENSPEMG00000016318	Tnrc6a	100	77.783	Peromyscus_maniculatus_bairdii
ENSMODG00000016348	TNRC6A	96	96.285	ENSPCIG00000012106	TNRC6A	100	96.285	Phascolarctos_cinereus
ENSMODG00000016348	TNRC6A	99	81.467	ENSPPYG00000007202	TNRC6A	100	80.129	Pongo_abelii
ENSMODG00000016348	TNRC6A	92	88.660	ENSPCAG00000008260	TNRC6A	94	88.660	Procavia_capensis
ENSMODG00000016348	TNRC6A	99	79.812	ENSPCOG00000010134	TNRC6A	99	78.621	Propithecus_coquereli
ENSMODG00000016348	TNRC6A	87	63.441	ENSPVAG00000012066	TNRC6A	99	63.158	Pteropus_vampyrus
ENSMODG00000016348	TNRC6A	99	77.772	ENSRNOG00000024737	Tnrc6a	98	80.133	Rattus_norvegicus
ENSMODG00000016348	TNRC6A	96	82.269	ENSRBIG00000014222	TNRC6A	99	81.962	Rhinopithecus_bieti
ENSMODG00000016348	TNRC6A	99	82.180	ENSRROG00000032360	TNRC6A	99	81.035	Rhinopithecus_roxellana
ENSMODG00000016348	TNRC6A	96	82.757	ENSSBOG00000036197	TNRC6A	100	84.954	Saimiri_boliviensis_boliviensis
ENSMODG00000016348	TNRC6A	90	95.485	ENSSHAG00000008811	TNRC6A	99	96.911	Sarcophilus_harrisii
ENSMODG00000016348	TNRC6A	90	60.096	ENSSFOG00015008920	tnrc6a	100	62.249	Scleropages_formosus
ENSMODG00000016348	TNRC6A	69	75.725	ENSSARG00000002479	TNRC6A	88	75.362	Sorex_araneus
ENSMODG00000016348	TNRC6A	89	80.968	ENSSPUG00000010525	TNRC6A	100	80.913	Sphenodon_punctatus
ENSMODG00000016348	TNRC6A	99	80.189	ENSSSCG00000038870	TNRC6A	100	85.164	Sus_scrofa
ENSMODG00000016348	TNRC6A	99	80.483	ENSTGUG00000006142	TNRC6A	100	80.483	Taeniopygia_guttata
ENSMODG00000016348	TNRC6A	96	79.755	ENSTBEG00000014965	TNRC6A	99	79.694	Tupaia_belangeri
ENSMODG00000016348	TNRC6A	92	87.815	ENSTTRG00000002008	TNRC6A	92	87.500	Tursiops_truncatus
ENSMODG00000016348	TNRC6A	77	78.772	ENSUAMG00000006656	-	93	79.028	Ursus_americanus
ENSMODG00000016348	TNRC6A	97	82.110	ENSUMAG00000008274	TNRC6A	100	84.056	Ursus_maritimus
ENSMODG00000016348	TNRC6A	56	76.642	ENSVPAG00000010764	-	55	76.642	Vicugna_pacos
ENSMODG00000016348	TNRC6A	90	93.514	ENSVVUG00000005380	TNRC6A	99	93.514	Vulpes_vulpes
ENSMODG00000016348	TNRC6A	94	67.472	ENSXETG00000030437	TNRC6A	99	67.406	Xenopus_tropicalis