EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMODG00000016380 (Gene tree)
Gene ID: 100015892
Gene Symbol: -
Alias: -
Full Name: sarcalumenin
Gene Type: protein_coding
Species: Monodelphis_domestica
Status: putative
Strand: Plus strand
Length: 60395 bases
Position: chr6:145810354-145870748
Accession: 100015892
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMODP00000020467	MMR_HSR1	PF01926.23	2.9e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMODT00000020828	-	7428	XM_007499074	ENSMODP00000020467	889 (aa)	XP_007499136	F7ER60

Gene Model

Click here to download ENSMODG00000016380's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMODG00000016380's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMODG00000016380	-	51	95.796	ENSG00000185739	SRL	99	96.744	Homo_sapiens
ENSMODG00000016380	-	51	83.370	ENSAPOG00000018093	srl	99	84.318	Acanthochromis_polyacanthus
ENSMODG00000016380	-	50	77.551	ENSAPOG00000012432	SRL	98	77.551	Acanthochromis_polyacanthus
ENSMODG00000016380	-	98	96.460	ENSAMEG00000010862	SRL	65	96.460	Ailuropoda_melanoleuca
ENSMODG00000016380	-	50	76.072	ENSACIG00000015419	SRL	99	76.072	Amphilophus_citrinellus
ENSMODG00000016380	-	51	83.370	ENSACIG00000015799	srl	99	83.370	Amphilophus_citrinellus
ENSMODG00000016380	-	50	77.376	ENSAOCG00000017049	SRL	96	77.376	Amphiprion_ocellaris
ENSMODG00000016380	-	51	83.592	ENSAPEG00000006911	srl	96	83.592	Amphiprion_percula
ENSMODG00000016380	-	50	73.696	ENSAPEG00000006533	SRL	96	73.982	Amphiprion_percula
ENSMODG00000016380	-	50	84.354	ENSATEG00000024315	srl	96	83.149	Anabas_testudineus
ENSMODG00000016380	-	50	74.009	ENSATEG00000009643	SRL	52	74.009	Anabas_testudineus
ENSMODG00000016380	-	50	73.789	ENSACLG00000024674	SRL	56	73.789	Astatotilapia_calliptera
ENSMODG00000016380	-	51	83.370	ENSACLG00000027685	srl	98	83.482	Astatotilapia_calliptera
ENSMODG00000016380	-	51	82.667	ENSAMXG00000018789	srl	88	82.667	Astyanax_mexicanus
ENSMODG00000016380	-	53	68.530	ENSAMXG00000038693	SRL	99	73.009	Astyanax_mexicanus
ENSMODG00000016380	-	66	96.035	ENSBTAG00000001078	SRL	79	87.791	Bos_taurus
ENSMODG00000016380	-	50	96.380	ENSCJAG00000019750	SRL	96	95.575	Callithrix_jacchus
ENSMODG00000016380	-	51	96.026	ENSCAFG00000019233	SRL	85	95.207	Canis_familiaris
ENSMODG00000016380	-	83	74.381	ENSCAFG00020025024	SRL	98	66.327	Canis_lupus_dingo
ENSMODG00000016380	-	67	95.032	ENSCHIG00000017927	SRL	98	63.503	Capra_hircus
ENSMODG00000016380	-	51	97.124	ENSTSYG00000007919	SRL	99	97.674	Carlito_syrichta
ENSMODG00000016380	-	51	96.909	ENSCPOG00000012643	SRL	96	96.909	Cavia_porcellus
ENSMODG00000016380	-	51	88.596	ENSCCAG00000032646	SRL	99	97.354	Cebus_capucinus
ENSMODG00000016380	-	92	88.911	ENSCATG00000032227	-	96	95.796	Cercocebus_atys
ENSMODG00000016380	-	51	96.689	ENSCLAG00000016242	SRL	96	96.689	Chinchilla_lanigera
ENSMODG00000016380	-	92	89.307	ENSCSAG00000009635	-	82	89.307	Chlorocebus_sabaeus
ENSMODG00000016380	-	52	97.927	ENSCHOG00000001618	SRL	89	97.927	Choloepus_hoffmanni
ENSMODG00000016380	-	70	93.830	ENSCPBG00000026371	SRL	96	89.871	Chrysemys_picta_bellii
ENSMODG00000016380	-	51	95.796	ENSCANG00000035872	SRL	99	96.744	Colobus_angolensis_palliatus
ENSMODG00000016380	-	98	66.145	ENSCGRG00001016630	Srl	96	96.026	Cricetulus_griseus_chok1gshd
ENSMODG00000016380	-	98	66.145	ENSCGRG00000005458	Srl	96	96.026	Cricetulus_griseus_crigri
ENSMODG00000016380	-	51	83.556	ENSCSEG00000016151	srl	96	83.556	Cynoglossus_semilaevis
ENSMODG00000016380	-	51	71.903	ENSCSEG00000011866	SRL	91	71.965	Cynoglossus_semilaevis
ENSMODG00000016380	-	65	62.768	ENSCVAG00000022465	SRL	60	76.275	Cyprinodon_variegatus
ENSMODG00000016380	-	50	85.034	ENSCVAG00000003513	srl	95	85.034	Cyprinodon_variegatus
ENSMODG00000016380	-	51	84.889	ENSDARG00000104587	srl	96	84.889	Danio_rerio
ENSMODG00000016380	-	99	66.222	ENSDNOG00000011643	SRL	99	65.705	Dasypus_novemcinctus
ENSMODG00000016380	-	51	95.585	ENSDORG00000014807	Srl	96	95.585	Dipodomys_ordii
ENSMODG00000016380	-	100	64.317	ENSEASG00005000942	SRL	100	65.246	Equus_asinus_asinus
ENSMODG00000016380	-	100	62.306	ENSECAG00000024219	SRL	97	94.978	Equus_caballus
ENSMODG00000016380	-	52	70.299	ENSELUG00000022266	SRL	50	71.154	Esox_lucius
ENSMODG00000016380	-	51	79.657	ENSELUG00000015616	srl	96	79.657	Esox_lucius
ENSMODG00000016380	-	99	63.776	ENSFCAG00000022075	SRL	96	95.405	Felis_catus
ENSMODG00000016380	-	52	90.065	ENSFALG00000004328	SRL	66	90.065	Ficedula_albicollis
ENSMODG00000016380	-	51	96.689	ENSFDAG00000006199	SRL	96	96.689	Fukomys_damarensis
ENSMODG00000016380	-	50	77.098	ENSFHEG00000011854	SRL	98	77.551	Fundulus_heteroclitus
ENSMODG00000016380	-	50	83.900	ENSFHEG00000011239	srl	97	82.561	Fundulus_heteroclitus
ENSMODG00000016380	-	50	81.015	ENSGMOG00000014954	srl	99	81.015	Gadus_morhua
ENSMODG00000016380	-	51	91.814	ENSGALG00000038884	SRL	96	91.814	Gallus_gallus
ENSMODG00000016380	-	50	84.009	ENSGAFG00000000010	srl	98	82.561	Gambusia_affinis
ENSMODG00000016380	-	50	78.231	ENSGAFG00000016984	SRL	98	78.231	Gambusia_affinis
ENSMODG00000016380	-	50	81.678	ENSGACG00000011332	srl	99	81.678	Gasterosteus_aculeatus
ENSMODG00000016380	-	98	63.439	ENSGGOG00000011312	-	96	95.796	Gorilla_gorilla
ENSMODG00000016380	-	51	83.370	ENSHBUG00000007581	srl	98	83.482	Haplochromis_burtoni
ENSMODG00000016380	-	52	71.186	ENSHBUG00000015710	SRL	59	71.186	Haplochromis_burtoni
ENSMODG00000016380	-	51	96.909	ENSHGLG00000015271	SRL	96	96.909	Heterocephalus_glaber_female
ENSMODG00000016380	-	51	96.909	ENSHGLG00100019378	SRL	96	96.909	Heterocephalus_glaber_male
ENSMODG00000016380	-	50	73.009	ENSHCOG00000001012	SRL	50	72.788	Hippocampus_comes
ENSMODG00000016380	-	51	83.149	ENSHCOG00000008687	srl	98	84.127	Hippocampus_comes
ENSMODG00000016380	-	51	81.556	ENSIPUG00000012513	srl	96	81.696	Ictalurus_punctatus
ENSMODG00000016380	-	98	66.304	ENSSTOG00000021151	-	96	96.468	Ictidomys_tridecemlineatus
ENSMODG00000016380	-	51	96.026	ENSJJAG00000016400	Srl	96	96.026	Jaculus_jaculus
ENSMODG00000016380	-	56	69.455	ENSKMAG00000019537	SRL	99	77.273	Kryptolebias_marmoratus
ENSMODG00000016380	-	50	83.900	ENSKMAG00000014115	srl	93	86.190	Kryptolebias_marmoratus
ENSMODG00000016380	-	51	83.111	ENSLBEG00000026643	srl	96	83.111	Labrus_bergylta
ENSMODG00000016380	-	51	85.588	ENSLACG00000002825	SRL	99	85.588	Latimeria_chalumnae
ENSMODG00000016380	-	51	84.581	ENSLOCG00000002644	srl	97	84.581	Lepisosteus_oculatus
ENSMODG00000016380	-	98	65.792	ENSLAFG00000006329	SRL	99	65.528	Loxodonta_africana
ENSMODG00000016380	-	92	89.109	ENSMNEG00000019236	-	97	94.143	Macaca_nemestrina
ENSMODG00000016380	-	51	87.832	ENSMLEG00000032156	SRL	95	87.832	Mandrillus_leucophaeus
ENSMODG00000016380	-	50	84.127	ENSMAMG00000023322	srl	96	82.927	Mastacembelus_armatus
ENSMODG00000016380	-	52	71.398	ENSMZEG00005004010	SRL	59	71.398	Maylandia_zebra
ENSMODG00000016380	-	51	83.370	ENSMZEG00005004548	srl	98	83.482	Maylandia_zebra
ENSMODG00000016380	-	51	91.814	ENSMGAG00000009342	SRL	95	93.351	Meleagris_gallopavo
ENSMODG00000016380	-	79	79.669	ENSMICG00000032307	SRL	96	96.460	Microcebus_murinus
ENSMODG00000016380	-	51	95.364	ENSMOCG00000008208	Srl	96	95.364	Microtus_ochrogaster
ENSMODG00000016380	-	50	83.036	ENSMMOG00000013970	srl	99	83.036	Mola_mola
ENSMODG00000016380	-	50	83.333	ENSMALG00000005039	srl	98	83.333	Monopterus_albus
ENSMODG00000016380	-	98	63.821	MGP_CAROLIEiJ_G0020400	Srl	96	96.247	Mus_caroli
ENSMODG00000016380	-	98	63.482	ENSMUSG00000022519	Srl	96	96.247	Mus_musculus
ENSMODG00000016380	-	98	64.440	MGP_PahariEiJ_G0016108	Srl	69	77.760	Mus_pahari
ENSMODG00000016380	-	98	64.179	MGP_SPRETEiJ_G0021294	Srl	96	96.247	Mus_spretus
ENSMODG00000016380	-	99	64.537	ENSMPUG00000015025	SRL	84	70.827	Mustela_putorius_furo
ENSMODG00000016380	-	98	65.778	ENSMLUG00000030733	SRL	99	64.595	Myotis_lucifugus
ENSMODG00000016380	-	51	95.806	ENSNGAG00000019741	Srl	96	95.806	Nannospalax_galili
ENSMODG00000016380	-	51	83.370	ENSNBRG00000023775	srl	96	83.370	Neolamprologus_brichardi
ENSMODG00000016380	-	52	71.398	ENSNBRG00000002422	SRL	88	56.831	Neolamprologus_brichardi
ENSMODG00000016380	-	51	89.135	ENSNLEG00000029051	SRL	95	89.135	Nomascus_leucogenys
ENSMODG00000016380	-	99	62.983	ENSOPRG00000000477	-	99	63.117	Ochotona_princeps
ENSMODG00000016380	-	51	96.468	ENSODEG00000013256	SRL	96	96.468	Octodon_degus
ENSMODG00000016380	-	51	82.927	ENSONIG00000005192	srl	96	82.927	Oreochromis_niloticus
ENSMODG00000016380	-	54	92.516	ENSOCUG00000025140	SRL	99	64.596	Oryctolagus_cuniculus
ENSMODG00000016380	-	50	83.900	ENSORLG00000008291	srl	91	86.788	Oryzias_latipes
ENSMODG00000016380	-	51	74.834	ENSORLG00000015064	SRL	99	74.834	Oryzias_latipes
ENSMODG00000016380	-	50	83.673	ENSORLG00020019784	srl	79	86.528	Oryzias_latipes_hni
ENSMODG00000016380	-	51	75.055	ENSORLG00020018173	SRL	99	75.055	Oryzias_latipes_hni
ENSMODG00000016380	-	50	83.220	ENSORLG00015009342	srl	91	83.220	Oryzias_latipes_hsok
ENSMODG00000016380	-	51	75.110	ENSORLG00015019063	SRL	99	75.276	Oryzias_latipes_hsok
ENSMODG00000016380	-	60	64.545	ENSOMEG00000005682	SRL	53	72.609	Oryzias_melastigma
ENSMODG00000016380	-	50	83.900	ENSOMEG00000010006	srl	97	84.055	Oryzias_melastigma
ENSMODG00000016380	-	98	64.726	ENSOGAG00000029266	SRL	99	64.621	Otolemur_garnettii
ENSMODG00000016380	-	65	96.026	ENSOARG00000003074	SRL	69	96.026	Ovis_aries
ENSMODG00000016380	-	98	63.030	ENSPPAG00000024919	-	99	96.744	Pan_paniscus
ENSMODG00000016380	-	51	94.737	ENSPPRG00000010274	SRL	99	97.209	Panthera_pardus
ENSMODG00000016380	-	51	94.737	ENSPTIG00000015162	SRL	99	97.209	Panthera_tigris_altaica
ENSMODG00000016380	-	99	62.644	ENSPTRG00000007712	SRL	99	96.744	Pan_troglodytes
ENSMODG00000016380	-	52	94.360	ENSPANG00000013804	SRL	99	94.360	Papio_anubis
ENSMODG00000016380	-	50	75.964	ENSPKIG00000024974	SRL	88	75.964	Paramormyrops_kingsleyae
ENSMODG00000016380	-	51	83.186	ENSPKIG00000006405	srl	96	83.186	Paramormyrops_kingsleyae
ENSMODG00000016380	-	50	73.469	ENSPMGG00000023505	-	99	73.469	Periophthalmus_magnuspinnatus
ENSMODG00000016380	-	51	83.556	ENSPMGG00000021081	srl	97	83.556	Periophthalmus_magnuspinnatus
ENSMODG00000016380	-	51	96.026	ENSPEMG00000015842	Srl	96	96.026	Peromyscus_maniculatus_bairdii
ENSMODG00000016380	-	51	98.894	ENSPCIG00000012128	SRL	99	98.894	Phascolarctos_cinereus
ENSMODG00000016380	-	50	81.798	ENSPFOG00000011408	srl	94	81.798	Poecilia_formosa
ENSMODG00000016380	-	50	77.098	ENSPLAG00000002932	SRL	98	77.098	Poecilia_latipinna
ENSMODG00000016380	-	51	82.340	ENSPLAG00000008017	srl	98	82.340	Poecilia_latipinna
ENSMODG00000016380	-	50	83.784	ENSPMEG00000006745	srl	98	82.340	Poecilia_mexicana
ENSMODG00000016380	-	51	72.824	ENSPMEG00000005890	SRL	61	73.134	Poecilia_mexicana
ENSMODG00000016380	-	50	83.559	ENSPREG00000007751	srl	98	83.559	Poecilia_reticulata
ENSMODG00000016380	-	50	78.231	ENSPREG00000000315	SRL	98	78.231	Poecilia_reticulata
ENSMODG00000016380	-	64	90.342	ENSPCAG00000003378	-	65	90.342	Procavia_capensis
ENSMODG00000016380	-	51	96.681	ENSPCOG00000023135	SRL	99	97.907	Propithecus_coquereli
ENSMODG00000016380	-	72	88.593	ENSPVAG00000006586	SRL	99	65.891	Pteropus_vampyrus
ENSMODG00000016380	-	52	71.398	ENSPNYG00000003423	SRL	59	71.398	Pundamilia_nyererei
ENSMODG00000016380	-	51	83.370	ENSPNYG00000001200	srl	98	83.482	Pundamilia_nyererei
ENSMODG00000016380	-	51	73.407	ENSPNAG00000007361	-	93	73.407	Pygocentrus_nattereri
ENSMODG00000016380	-	51	81.556	ENSPNAG00000023106	srl	96	81.556	Pygocentrus_nattereri
ENSMODG00000016380	-	69	79.653	ENSRNOG00000005269	Srl	99	63.675	Rattus_norvegicus
ENSMODG00000016380	-	99	63.978	ENSRBIG00000042358	SRL	56	89.307	Rhinopithecus_bieti
ENSMODG00000016380	-	99	61.515	ENSSBOG00000029273	SRL	96	95.575	Saimiri_boliviensis_boliviensis
ENSMODG00000016380	-	100	81.356	ENSSHAG00000011715	-	100	82.116	Sarcophilus_harrisii
ENSMODG00000016380	-	50	84.127	ENSSFOG00015009773	srl	97	82.743	Scleropages_formosus
ENSMODG00000016380	-	50	83.036	ENSSMAG00000016274	srl	98	83.036	Scophthalmus_maximus
ENSMODG00000016380	-	50	84.807	ENSSDUG00000010808	srl	97	84.807	Seriola_dumerili
ENSMODG00000016380	-	50	75.893	ENSSDUG00000009161	SRL	98	75.893	Seriola_dumerili
ENSMODG00000016380	-	50	75.439	ENSSLDG00000014601	SRL	99	75.439	Seriola_lalandi_dorsalis
ENSMODG00000016380	-	51	83.778	ENSSLDG00000022024	srl	97	83.929	Seriola_lalandi_dorsalis
ENSMODG00000016380	-	51	90.708	ENSSPUG00000016859	SRL	99	90.708	Sphenodon_punctatus
ENSMODG00000016380	-	50	84.807	ENSSPAG00000019105	srl	96	83.628	Stegastes_partitus
ENSMODG00000016380	-	100	65.372	ENSSSCG00000007949	SRL	100	95.768	Sus_scrofa
ENSMODG00000016380	-	51	91.593	ENSTGUG00000003951	-	99	91.593	Taeniopygia_guttata
ENSMODG00000016380	-	51	82.889	ENSTRUG00000006005	srl	96	82.889	Takifugu_rubripes
ENSMODG00000016380	-	51	82.667	ENSTNIG00000009739	srl	96	82.667	Tetraodon_nigroviridis
ENSMODG00000016380	-	69	95.227	ENSTTRG00000002709	-	62	95.227	Tursiops_truncatus
ENSMODG00000016380	-	80	75.501	ENSUAMG00000005701	SRL	99	65.618	Ursus_americanus
ENSMODG00000016380	-	83	72.157	ENSVVUG00000016331	-	87	65.198	Vulpes_vulpes
ENSMODG00000016380	-	51	89.556	ENSXETG00000017313	srl	99	89.556	Xenopus_tropicalis
ENSMODG00000016380	-	50	77.551	ENSXCOG00000014584	SRL	98	77.551	Xiphophorus_couchianus
ENSMODG00000016380	-	50	75.110	ENSXMAG00000027598	SRL	62	75.771	Xiphophorus_maculatus
ENSMODG00000016380	-	50	84.009	ENSXMAG00000004625	srl	90	84.009	Xiphophorus_maculatus