EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMODG00000016458 (Gene tree)
Gene ID: 100022012
Gene Symbol: RBM38
Alias: HSRNASEB|RNPC1|SEB4D|dJ800J21.2|seb4B
Full Name: RNA binding motif protein 38
Gene Type: protein_coding
Species: Monodelphis_domestica
Status: putative
Strand: Minus strand
Length: 35752 bases
Position: chr1:486450289-486486040
Accession: 100022012
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMODP00000020553	RRM_1	PF00076.22	1.4e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMODT00000020918	RBM38-201	3027	-	ENSMODP00000020553	234 (aa)	XP_001368885	F7A3F9

Gene Model

Click here to download ENSMODG00000016458's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMODG00000016458's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMODG00000016458	RBM38	93	66.250	ENSMODG00000010899	RBM24	92	70.661
ENSMODG00000016458	RBM38	59	35.294	ENSMODG00000004217	HNRNPAB	50	35.294

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMODG00000016458	RBM38	100	79.253	ENSG00000132819	RBM38	100	87.603	Homo_sapiens
ENSMODG00000016458	RBM38	91	68.372	ENSAPOG00000009939	-	92	68.519	Acanthochromis_polyacanthus
ENSMODG00000016458	RBM38	94	56.432	ENSAPOG00000003301	rbm38	95	56.432	Acanthochromis_polyacanthus
ENSMODG00000016458	RBM38	92	67.556	ENSACIG00000012502	-	100	87.179	Amphilophus_citrinellus
ENSMODG00000016458	RBM38	94	56.198	ENSACIG00000000010	rbm38	95	56.198	Amphilophus_citrinellus
ENSMODG00000016458	RBM38	99	63.598	ENSAOCG00000012559	RBM38	99	64.167	Amphiprion_ocellaris
ENSMODG00000016458	RBM38	94	56.432	ENSAOCG00000013497	-	95	56.432	Amphiprion_ocellaris
ENSMODG00000016458	RBM38	91	64.629	ENSAPEG00000023581	-	93	65.217	Amphiprion_percula
ENSMODG00000016458	RBM38	99	57.787	ENSAPEG00000013137	rbm38	99	57.787	Amphiprion_percula
ENSMODG00000016458	RBM38	91	65.939	ENSATEG00000016710	-	93	66.957	Anabas_testudineus
ENSMODG00000016458	RBM38	94	60.088	ENSATEG00000016366	rbm38	96	59.211	Anabas_testudineus
ENSMODG00000016458	RBM38	92	83.333	ENSACAG00000016238	RBM38	90	83.333	Anolis_carolinensis
ENSMODG00000016458	RBM38	92	81.193	ENSANAG00000031959	RBM38	100	88.430	Aotus_nancymaae
ENSMODG00000016458	RBM38	92	65.823	ENSACLG00000019514	-	95	65.957	Astatotilapia_calliptera
ENSMODG00000016458	RBM38	100	64.113	ENSAMXG00000015601	-	100	66.393	Astyanax_mexicanus
ENSMODG00000016458	RBM38	89	58.182	ENSAMXG00000038120	rbm38	71	68.235	Astyanax_mexicanus
ENSMODG00000016458	RBM38	100	78.423	ENSBTAG00000008105	RBM38	100	78.423	Bos_taurus
ENSMODG00000016458	RBM38	100	80.083	ENSCJAG00000019139	RBM38	100	88.430	Callithrix_jacchus
ENSMODG00000016458	RBM38	100	80.913	ENSCAFG00020021943	RBM38	100	80.913	Canis_lupus_dingo
ENSMODG00000016458	RBM38	100	78.008	ENSCHIG00000002609	RBM38	100	78.008	Capra_hircus
ENSMODG00000016458	RBM38	100	79.253	ENSCPOG00000012781	RBM38	100	79.253	Cavia_porcellus
ENSMODG00000016458	RBM38	100	80.083	ENSCCAG00000036872	RBM38	100	88.430	Cebus_capucinus
ENSMODG00000016458	RBM38	100	79.668	ENSCATG00000032133	RBM38	100	88.430	Cercocebus_atys
ENSMODG00000016458	RBM38	94	79.646	ENSCLAG00000005906	RBM38	97	79.646	Chinchilla_lanigera
ENSMODG00000016458	RBM38	100	79.668	ENSCSAG00000015503	RBM38	100	79.668	Chlorocebus_sabaeus
ENSMODG00000016458	RBM38	92	92.093	ENSCPBG00000024059	RBM38	100	92.093	Chrysemys_picta_bellii
ENSMODG00000016458	RBM38	64	62.420	ENSCING00000025102	-	68	62.420	Ciona_intestinalis
ENSMODG00000016458	RBM38	66	63.750	ENSCSAVG00000001132	-	63	62.722	Ciona_savignyi
ENSMODG00000016458	RBM38	99	61.250	ENSCANG00000030105	-	89	61.250	Colobus_angolensis_palliatus
ENSMODG00000016458	RBM38	100	74.895	ENSCGRG00001012928	Rbm38	100	75.314	Cricetulus_griseus_chok1gshd
ENSMODG00000016458	RBM38	65	65.806	ENSCSEG00000020943	rbm38	60	60.656	Cynoglossus_semilaevis
ENSMODG00000016458	RBM38	92	68.807	ENSCSEG00000004701	-	94	70.320	Cynoglossus_semilaevis
ENSMODG00000016458	RBM38	91	55.745	ENSCVAG00000015952	rbm38	92	55.319	Cyprinodon_variegatus
ENSMODG00000016458	RBM38	91	66.087	ENSCVAG00000005472	-	93	65.217	Cyprinodon_variegatus
ENSMODG00000016458	RBM38	92	63.203	ENSDARG00000058818	rbm38	97	62.771	Danio_rerio
ENSMODG00000016458	RBM38	92	81.019	ENSDNOG00000032004	RBM38	100	81.019	Dasypus_novemcinctus
ENSMODG00000016458	RBM38	100	78.838	ENSECAG00000007700	RBM38	100	78.838	Equus_caballus
ENSMODG00000016458	RBM38	100	76.763	ENSEEUG00000013489	RBM38	100	77.593	Erinaceus_europaeus
ENSMODG00000016458	RBM38	100	62.451	ENSELUG00000005849	-	100	62.846	Esox_lucius
ENSMODG00000016458	RBM38	86	62.439	ENSELUG00000000585	-	83	65.104	Esox_lucius
ENSMODG00000016458	RBM38	100	79.668	ENSFCAG00000042916	RBM38	100	87.603	Felis_catus
ENSMODG00000016458	RBM38	75	90.286	ENSFALG00000010805	RBM38	91	90.286	Ficedula_albicollis
ENSMODG00000016458	RBM38	91	69.907	ENSFHEG00000006160	-	92	68.981	Fundulus_heteroclitus
ENSMODG00000016458	RBM38	91	56.170	ENSFHEG00000017748	rbm38	92	56.170	Fundulus_heteroclitus
ENSMODG00000016458	RBM38	77	70.109	ENSGMOG00000016655	-	98	74.054	Gadus_morhua
ENSMODG00000016458	RBM38	92	90.233	ENSGALG00000026081	RBM38	100	90.233	Gallus_gallus
ENSMODG00000016458	RBM38	92	62.673	ENSGACG00000015224	rbm38	100	62.673	Gasterosteus_aculeatus
ENSMODG00000016458	RBM38	90	67.281	ENSGACG00000009873	-	98	68.981	Gasterosteus_aculeatus
ENSMODG00000016458	RBM38	92	92.093	ENSGAGG00000001187	RBM38	100	92.093	Gopherus_agassizii
ENSMODG00000016458	RBM38	92	69.369	ENSHBUG00000011778	-	94	69.196	Haplochromis_burtoni
ENSMODG00000016458	RBM38	97	58.475	ENSHBUG00000012058	rbm38	96	57.627	Haplochromis_burtoni
ENSMODG00000016458	RBM38	100	75.000	ENSHGLG00000015077	RBM38	100	77.500	Heterocephalus_glaber_female
ENSMODG00000016458	RBM38	84	55.102	ENSHCOG00000019040	rbm38	55	72.868	Hippocampus_comes
ENSMODG00000016458	RBM38	84	72.139	ENSHCOG00000005622	-	53	74.603	Hippocampus_comes
ENSMODG00000016458	RBM38	100	65.447	ENSIPUG00000019349	-	100	64.228	Ictalurus_punctatus
ENSMODG00000016458	RBM38	90	54.701	ENSKMAG00000012402	rbm38	98	52.101	Kryptolebias_marmoratus
ENSMODG00000016458	RBM38	94	57.025	ENSLBEG00000018878	rbm38	95	56.198	Labrus_bergylta
ENSMODG00000016458	RBM38	92	65.929	ENSLBEG00000016163	RBM38	94	68.468	Labrus_bergylta
ENSMODG00000016458	RBM38	92	72.197	ENSLOCG00000003456	rbm38	94	71.749	Lepisosteus_oculatus
ENSMODG00000016458	RBM38	98	79.661	ENSMFAG00000043808	RBM38	96	88.793	Macaca_fascicularis
ENSMODG00000016458	RBM38	100	79.668	ENSMMUG00000031391	RBM38	100	88.430	Macaca_mulatta
ENSMODG00000016458	RBM38	100	79.668	ENSMNEG00000034683	RBM38	100	88.430	Macaca_nemestrina
ENSMODG00000016458	RBM38	53	70.968	ENSMLEG00000043261	-	100	70.968	Mandrillus_leucophaeus
ENSMODG00000016458	RBM38	91	65.789	ENSMAMG00000020499	RBM38	93	67.686	Mastacembelus_armatus
ENSMODG00000016458	RBM38	94	57.025	ENSMAMG00000024135	rbm38	95	57.025	Mastacembelus_armatus
ENSMODG00000016458	RBM38	92	69.369	ENSMZEG00005000849	-	94	69.196	Maylandia_zebra
ENSMODG00000016458	RBM38	94	56.198	ENSMZEG00005026036	rbm38	95	55.785	Maylandia_zebra
ENSMODG00000016458	RBM38	100	75.314	ENSMAUG00000021211	Rbm38	100	75.732	Mesocricetus_auratus
ENSMODG00000016458	RBM38	92	82.569	ENSMICG00000038011	RBM38	100	82.569	Microcebus_murinus
ENSMODG00000016458	RBM38	100	74.895	ENSMOCG00000008715	Rbm38	100	75.314	Microtus_ochrogaster
ENSMODG00000016458	RBM38	99	66.525	ENSMMOG00000020051	-	99	67.089	Mola_mola
ENSMODG00000016458	RBM38	94	54.911	ENSMALG00000022327	rbm38	69	66.667	Monopterus_albus
ENSMODG00000016458	RBM38	77	75.269	ENSMALG00000004680	RBM38	69	75.269	Monopterus_albus
ENSMODG00000016458	RBM38	100	75.833	MGP_CAROLIEiJ_G0024745	Rbm38	100	78.333	Mus_caroli
ENSMODG00000016458	RBM38	100	75.417	ENSMUSG00000027510	Rbm38	100	77.917	Mus_musculus
ENSMODG00000016458	RBM38	100	75.000	MGP_PahariEiJ_G0026186	Rbm38	100	77.500	Mus_pahari
ENSMODG00000016458	RBM38	100	75.000	MGP_SPRETEiJ_G0025665	Rbm38	100	77.500	Mus_spretus
ENSMODG00000016458	RBM38	77	85.326	ENSMPUG00000006518	RBM38	94	83.684	Mustela_putorius_furo
ENSMODG00000016458	RBM38	92	79.358	ENSMLUG00000011140	RBM38	100	79.358	Myotis_lucifugus
ENSMODG00000016458	RBM38	92	65.823	ENSNBRG00000022545	-	95	65.957	Neolamprologus_brichardi
ENSMODG00000016458	RBM38	97	59.072	ENSNBRG00000022685	rbm38	95	58.228	Neolamprologus_brichardi
ENSMODG00000016458	RBM38	57	91.045	ENSMEUG00000005475	-	100	91.045	Notamacropus_eugenii
ENSMODG00000016458	RBM38	100	78.423	ENSODEG00000007980	RBM38	100	78.423	Octodon_degus
ENSMODG00000016458	RBM38	93	56.432	ENSONIG00000017073	rbm38	80	61.809	Oreochromis_niloticus
ENSMODG00000016458	RBM38	91	65.678	ENSONIG00000020324	-	95	65.812	Oreochromis_niloticus
ENSMODG00000016458	RBM38	95	87.387	ENSOANG00000009259	RBM38	90	84.483	Ornithorhynchus_anatinus
ENSMODG00000016458	RBM38	92	62.447	ENSORLG00000027180	-	95	64.135	Oryzias_latipes
ENSMODG00000016458	RBM38	94	55.967	ENSORLG00000012154	rbm38	78	61.809	Oryzias_latipes
ENSMODG00000016458	RBM38	92	62.869	ENSORLG00020020751	-	95	64.135	Oryzias_latipes_hni
ENSMODG00000016458	RBM38	94	54.733	ENSORLG00020017871	rbm38	78	60.804	Oryzias_latipes_hni
ENSMODG00000016458	RBM38	90	59.259	ENSORLG00015012606	rbm38	89	58.333	Oryzias_latipes_hsok
ENSMODG00000016458	RBM38	92	63.136	ENSORLG00015017040	-	95	65.678	Oryzias_latipes_hsok
ENSMODG00000016458	RBM38	94	54.321	ENSOMEG00000006805	rbm38	78	60.804	Oryzias_melastigma
ENSMODG00000016458	RBM38	92	63.445	ENSOMEG00000023912	-	95	65.532	Oryzias_melastigma
ENSMODG00000016458	RBM38	100	78.926	ENSOGAG00000029136	RBM38	100	78.926	Otolemur_garnettii
ENSMODG00000016458	RBM38	100	79.668	ENSPPRG00000009507	RBM38	100	87.603	Panthera_pardus
ENSMODG00000016458	RBM38	82	83.505	ENSPTRG00000013661	RBM38	100	87.603	Pan_troglodytes
ENSMODG00000016458	RBM38	53	92.742	ENSPTRG00000045845	-	68	92.742	Pan_troglodytes
ENSMODG00000016458	RBM38	100	79.668	ENSPANG00000020919	-	100	88.430	Papio_anubis
ENSMODG00000016458	RBM38	90	66.822	ENSPANG00000033127	-	91	65.888	Papio_anubis
ENSMODG00000016458	RBM38	100	62.800	ENSPKIG00000025417	rbm38	100	62.000	Paramormyrops_kingsleyae
ENSMODG00000016458	RBM38	93	67.265	ENSPKIG00000018122	-	95	87.387	Paramormyrops_kingsleyae
ENSMODG00000016458	RBM38	92	91.163	ENSPSIG00000011649	RBM38	92	91.163	Pelodiscus_sinensis
ENSMODG00000016458	RBM38	91	62.931	ENSPMGG00000017094	-	93	62.500	Periophthalmus_magnuspinnatus
ENSMODG00000016458	RBM38	94	56.612	ENSPMGG00000011343	rbm38	96	55.785	Periophthalmus_magnuspinnatus
ENSMODG00000016458	RBM38	100	96.154	ENSPCIG00000013648	RBM38	100	96.154	Phascolarctos_cinereus
ENSMODG00000016458	RBM38	91	55.085	ENSPFOG00000011658	rbm38	92	55.508	Poecilia_formosa
ENSMODG00000016458	RBM38	91	53.814	ENSPLAG00000005218	rbm38	92	55.508	Poecilia_latipinna
ENSMODG00000016458	RBM38	91	65.106	ENSPLAG00000002500	-	93	65.948	Poecilia_latipinna
ENSMODG00000016458	RBM38	91	54.237	ENSPMEG00000015770	rbm38	92	55.508	Poecilia_mexicana
ENSMODG00000016458	RBM38	91	55.508	ENSPREG00000007398	rbm38	92	55.932	Poecilia_reticulata
ENSMODG00000016458	RBM38	100	79.752	ENSPCOG00000026201	RBM38	100	87.705	Propithecus_coquereli
ENSMODG00000016458	RBM38	100	55.417	ENSPVAG00000006457	RBM38	100	55.833	Pteropus_vampyrus
ENSMODG00000016458	RBM38	92	69.369	ENSPNYG00000019727	-	100	86.325	Pundamilia_nyererei
ENSMODG00000016458	RBM38	97	58.120	ENSPNYG00000021373	rbm38	96	57.265	Pundamilia_nyererei
ENSMODG00000016458	RBM38	100	65.574	ENSPNAG00000015123	-	97	73.684	Pygocentrus_nattereri
ENSMODG00000016458	RBM38	92	63.636	ENSPNAG00000010596	rbm38	79	71.958	Pygocentrus_nattereri
ENSMODG00000016458	RBM38	100	76.151	ENSRNOG00000006420	Rbm38	100	76.151	Rattus_norvegicus
ENSMODG00000016458	RBM38	100	65.145	ENSRROG00000036388	-	100	65.145	Rhinopithecus_roxellana
ENSMODG00000016458	RBM38	92	81.193	ENSSBOG00000031053	RBM38	99	92.453	Saimiri_boliviensis_boliviensis
ENSMODG00000016458	RBM38	100	61.826	ENSSFOG00015004453	rbm38	100	65.984	Scleropages_formosus
ENSMODG00000016458	RBM38	91	66.957	ENSSDUG00000021082	RBM38	93	66.087	Seriola_dumerili
ENSMODG00000016458	RBM38	94	58.678	ENSSDUG00000022611	rbm38	95	57.851	Seriola_dumerili
ENSMODG00000016458	RBM38	100	58.921	ENSSLDG00000010845	rbm38	99	58.506	Seriola_lalandi_dorsalis
ENSMODG00000016458	RBM38	91	66.957	ENSSLDG00000011778	RBM38	93	66.087	Seriola_lalandi_dorsalis
ENSMODG00000016458	RBM38	94	56.612	ENSSPAG00000011113	rbm38	95	56.198	Stegastes_partitus
ENSMODG00000016458	RBM38	91	67.757	ENSSPAG00000020989	RBM38	92	67.907	Stegastes_partitus
ENSMODG00000016458	RBM38	100	80.498	ENSSSCG00000007504	RBM38	100	80.498	Sus_scrofa
ENSMODG00000016458	RBM38	94	57.741	ENSTRUG00000024954	rbm38	95	57.322	Takifugu_rubripes
ENSMODG00000016458	RBM38	92	62.869	ENSTRUG00000019869	-	95	64.407	Takifugu_rubripes
ENSMODG00000016458	RBM38	92	65.333	ENSTNIG00000007093	-	100	66.960	Tetraodon_nigroviridis
ENSMODG00000016458	RBM38	100	79.668	ENSUAMG00000019780	RBM38	100	79.668	Ursus_americanus
ENSMODG00000016458	RBM38	100	80.913	ENSVVUG00000017246	RBM38	100	80.913	Vulpes_vulpes
ENSMODG00000016458	RBM38	92	80.455	ENSXETG00000011268	rbm38	99	80.909	Xenopus_tropicalis
ENSMODG00000016458	RBM38	91	55.745	ENSXMAG00000023662	rbm38	92	55.745	Xiphophorus_maculatus