EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMODG00000016882 (Gene tree)
Gene ID: 100021292
Gene Symbol: RPUSD1
Alias: C16orf40|MGC19600|RLUCL
Full Name: RNA pseudouridine synthase domain containing 1
Gene Type: protein_coding
Species: Monodelphis_domestica
Status: putative
Strand: Minus strand
Length: 12803 bases
Position: chr6:151485553-151498355
Accession: 100021292
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMODP00000021069	PseudoU_synth_2	PF00849.22	1.5e-27	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMODT00000021440	RPUSD1-201	1615	-	ENSMODP00000021069	307 (aa)	XP_001373489	F6Y138

Gene Model

Click here to download ENSMODG00000016882's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMODG00000016882's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMODG00000016882	RPUSD1	63	30.806	ENSMODG00000004521	RPUSD4	52	30.806

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMODG00000016882	RPUSD1	100	65.506	ENSG00000007376	RPUSD1	100	77.976	Homo_sapiens
ENSMODG00000016882	RPUSD1	99	61.386	ENSAPOG00000022221	rpusd1	99	61.386	Acanthochromis_polyacanthus
ENSMODG00000016882	RPUSD1	100	71.845	ENSAMEG00000007461	RPUSD1	100	71.521	Ailuropoda_melanoleuca
ENSMODG00000016882	RPUSD1	99	60.261	ENSACIG00000015863	rpusd1	99	60.912	Amphilophus_citrinellus
ENSMODG00000016882	RPUSD1	99	61.765	ENSAOCG00000021975	rpusd1	96	62.092	Amphiprion_ocellaris
ENSMODG00000016882	RPUSD1	99	62.092	ENSAPEG00000001316	rpusd1	96	62.418	Amphiprion_percula
ENSMODG00000016882	RPUSD1	99	61.765	ENSATEG00000002984	rpusd1	99	61.765	Anabas_testudineus
ENSMODG00000016882	RPUSD1	78	65.560	ENSAPLG00000012316	RPUSD1	99	65.560	Anas_platyrhynchos
ENSMODG00000016882	RPUSD1	99	73.684	ENSACAG00000008953	RPUSD1	100	73.684	Anolis_carolinensis
ENSMODG00000016882	RPUSD1	100	67.089	ENSANAG00000024709	RPUSD1	100	66.667	Aotus_nancymaae
ENSMODG00000016882	RPUSD1	99	58.621	ENSACLG00000013692	rpusd1	99	61.165	Astatotilapia_calliptera
ENSMODG00000016882	RPUSD1	99	59.539	ENSAMXG00000019802	rpusd1	100	59.539	Astyanax_mexicanus
ENSMODG00000016882	RPUSD1	100	69.872	ENSBTAG00000000179	RPUSD1	100	69.872	Bos_taurus
ENSMODG00000016882	RPUSD1	100	66.562	ENSCJAG00000012253	RPUSD1	100	66.139	Callithrix_jacchus
ENSMODG00000016882	RPUSD1	100	70.874	ENSCAFG00000019614	RPUSD1	100	70.550	Canis_familiaris
ENSMODG00000016882	RPUSD1	100	70.874	ENSCAFG00020008891	RPUSD1	100	70.550	Canis_lupus_dingo
ENSMODG00000016882	RPUSD1	100	69.872	ENSCHIG00000012872	RPUSD1	100	69.872	Capra_hircus
ENSMODG00000016882	RPUSD1	100	66.990	ENSTSYG00000036934	RPUSD1	92	76.667	Carlito_syrichta
ENSMODG00000016882	RPUSD1	100	69.677	ENSCAPG00000014219	RPUSD1	100	69.355	Cavia_aperea
ENSMODG00000016882	RPUSD1	100	69.677	ENSCPOG00000034604	RPUSD1	100	69.355	Cavia_porcellus
ENSMODG00000016882	RPUSD1	100	67.405	ENSCCAG00000034385	RPUSD1	100	66.981	Cebus_capucinus
ENSMODG00000016882	RPUSD1	100	66.352	ENSCATG00000042983	RPUSD1	100	66.352	Cercocebus_atys
ENSMODG00000016882	RPUSD1	100	68.387	ENSCLAG00000013966	RPUSD1	100	68.387	Chinchilla_lanigera
ENSMODG00000016882	RPUSD1	100	66.456	ENSCSAG00000012121	RPUSD1	100	66.456	Chlorocebus_sabaeus
ENSMODG00000016882	RPUSD1	98	74.172	ENSCPBG00000021101	RPUSD1	99	74.172	Chrysemys_picta_bellii
ENSMODG00000016882	RPUSD1	88	72.894	ENSCANG00000028576	RPUSD1	96	72.527	Colobus_angolensis_palliatus
ENSMODG00000016882	RPUSD1	100	70.288	ENSCGRG00001014253	Rpusd1	100	70.288	Cricetulus_griseus_chok1gshd
ENSMODG00000016882	RPUSD1	100	70.288	ENSCGRG00000017995	Rpusd1	100	70.288	Cricetulus_griseus_crigri
ENSMODG00000016882	RPUSD1	99	61.184	ENSCSEG00000018512	rpusd1	100	61.184	Cynoglossus_semilaevis
ENSMODG00000016882	RPUSD1	99	62.046	ENSCVAG00000022746	rpusd1	99	62.046	Cyprinodon_variegatus
ENSMODG00000016882	RPUSD1	99	66.234	ENSDARG00000060192	rpusd1	100	65.909	Danio_rerio
ENSMODG00000016882	RPUSD1	100	66.667	ENSDNOG00000003721	RPUSD1	100	66.038	Dasypus_novemcinctus
ENSMODG00000016882	RPUSD1	100	68.932	ENSDORG00000026656	Rpusd1	100	69.677	Dipodomys_ordii
ENSMODG00000016882	RPUSD1	97	47.134	ENSEBUG00000008767	rpusd1	93	46.815	Eptatretus_burgeri
ENSMODG00000016882	RPUSD1	100	66.875	ENSEASG00005018421	RPUSD1	76	67.188	Equus_asinus_asinus
ENSMODG00000016882	RPUSD1	99	57.516	ENSELUG00000014307	rpusd1	89	57.980	Esox_lucius
ENSMODG00000016882	RPUSD1	100	70.227	ENSFCAG00000010359	RPUSD1	100	69.903	Felis_catus
ENSMODG00000016882	RPUSD1	99	75.329	ENSFALG00000003211	RPUSD1	100	75.329	Ficedula_albicollis
ENSMODG00000016882	RPUSD1	100	69.032	ENSFDAG00000013398	RPUSD1	100	68.710	Fukomys_damarensis
ENSMODG00000016882	RPUSD1	99	60.526	ENSFHEG00000004736	rpusd1	99	60.526	Fundulus_heteroclitus
ENSMODG00000016882	RPUSD1	99	59.672	ENSGMOG00000010756	rpusd1	99	60.000	Gadus_morhua
ENSMODG00000016882	RPUSD1	99	73.443	ENSGALG00000005315	RPUSD1	100	73.443	Gallus_gallus
ENSMODG00000016882	RPUSD1	99	62.376	ENSGAFG00000009886	rpusd1	99	62.376	Gambusia_affinis
ENSMODG00000016882	RPUSD1	97	60.927	ENSGACG00000014276	rpusd1	98	61.258	Gasterosteus_aculeatus
ENSMODG00000016882	RPUSD1	98	73.841	ENSGAGG00000004181	RPUSD1	99	73.841	Gopherus_agassizii
ENSMODG00000016882	RPUSD1	100	65.823	ENSGGOG00000013997	RPUSD1	100	65.409	Gorilla_gorilla
ENSMODG00000016882	RPUSD1	99	58.307	ENSHBUG00000023728	rpusd1	99	60.841	Haplochromis_burtoni
ENSMODG00000016882	RPUSD1	100	68.710	ENSHGLG00000002595	RPUSD1	100	68.571	Heterocephalus_glaber_female
ENSMODG00000016882	RPUSD1	100	68.710	ENSHGLG00100014303	RPUSD1	100	68.571	Heterocephalus_glaber_male
ENSMODG00000016882	RPUSD1	99	61.716	ENSHCOG00000002390	rpusd1	100	61.184	Hippocampus_comes
ENSMODG00000016882	RPUSD1	98	64.120	ENSIPUG00000001570	rpusd1	99	64.356	Ictalurus_punctatus
ENSMODG00000016882	RPUSD1	100	70.000	ENSSTOG00000004276	RPUSD1	100	69.677	Ictidomys_tridecemlineatus
ENSMODG00000016882	RPUSD1	100	69.032	ENSJJAG00000015696	Rpusd1	100	69.182	Jaculus_jaculus
ENSMODG00000016882	RPUSD1	99	61.716	ENSKMAG00000017287	rpusd1	99	62.295	Kryptolebias_marmoratus
ENSMODG00000016882	RPUSD1	99	60.784	ENSLBEG00000013354	RPUSD1	99	60.784	Labrus_bergylta
ENSMODG00000016882	RPUSD1	99	60.784	ENSLBEG00000022502	rpusd1	99	60.784	Labrus_bergylta
ENSMODG00000016882	RPUSD1	98	67.657	ENSLACG00000008869	RPUSD1	99	67.657	Latimeria_chalumnae
ENSMODG00000016882	RPUSD1	70	78.505	ENSLOCG00000005682	rpusd1	99	78.505	Lepisosteus_oculatus
ENSMODG00000016882	RPUSD1	100	68.285	ENSLAFG00000002115	RPUSD1	100	67.961	Loxodonta_africana
ENSMODG00000016882	RPUSD1	100	66.772	ENSMFAG00000003961	RPUSD1	100	66.772	Macaca_fascicularis
ENSMODG00000016882	RPUSD1	100	66.772	ENSMMUG00000000842	RPUSD1	100	66.772	Macaca_mulatta
ENSMODG00000016882	RPUSD1	100	66.772	ENSMNEG00000042712	RPUSD1	100	66.772	Macaca_nemestrina
ENSMODG00000016882	RPUSD1	100	66.772	ENSMLEG00000030591	RPUSD1	100	66.772	Mandrillus_leucophaeus
ENSMODG00000016882	RPUSD1	99	63.312	ENSMAMG00000004735	rpusd1	99	63.961	Mastacembelus_armatus
ENSMODG00000016882	RPUSD1	99	58.621	ENSMZEG00005003214	rpusd1	99	61.165	Maylandia_zebra
ENSMODG00000016882	RPUSD1	97	72.727	ENSMGAG00000005447	RPUSD1	99	72.727	Meleagris_gallopavo
ENSMODG00000016882	RPUSD1	86	69.549	ENSMAUG00000019998	Rpusd1	100	69.549	Mesocricetus_auratus
ENSMODG00000016882	RPUSD1	100	67.524	ENSMICG00000017561	RPUSD1	92	75.833	Microcebus_murinus
ENSMODG00000016882	RPUSD1	100	70.968	ENSMOCG00000014082	Rpusd1	100	71.613	Microtus_ochrogaster
ENSMODG00000016882	RPUSD1	99	60.000	ENSMMOG00000012569	rpusd1	100	59.672	Mola_mola
ENSMODG00000016882	RPUSD1	99	61.238	ENSMALG00000017818	rpusd1	99	62.013	Monopterus_albus
ENSMODG00000016882	RPUSD1	100	71.290	MGP_CAROLIEiJ_G0021244	Rpusd1	100	71.935	Mus_caroli
ENSMODG00000016882	RPUSD1	100	71.613	ENSMUSG00000041199	Rpusd1	100	72.258	Mus_musculus
ENSMODG00000016882	RPUSD1	100	71.521	MGP_PahariEiJ_G0023562	Rpusd1	100	71.935	Mus_pahari
ENSMODG00000016882	RPUSD1	100	71.613	MGP_SPRETEiJ_G0022155	Rpusd1	100	72.258	Mus_spretus
ENSMODG00000016882	RPUSD1	100	67.314	ENSMPUG00000015897	RPUSD1	100	67.961	Mustela_putorius_furo
ENSMODG00000016882	RPUSD1	100	68.153	ENSMLUG00000001089	RPUSD1	100	66.978	Myotis_lucifugus
ENSMODG00000016882	RPUSD1	100	69.677	ENSNGAG00000003595	Rpusd1	100	70.323	Nannospalax_galili
ENSMODG00000016882	RPUSD1	99	60.518	ENSNBRG00000006457	rpusd1	99	60.518	Neolamprologus_brichardi
ENSMODG00000016882	RPUSD1	55	55.307	ENSNLEG00000008424	-	100	56.742	Nomascus_leucogenys
ENSMODG00000016882	RPUSD1	100	86.319	ENSMEUG00000016049	RPUSD1	100	85.993	Notamacropus_eugenii
ENSMODG00000016882	RPUSD1	99	63.844	ENSOPRG00000008340	RPUSD1	99	63.518	Ochotona_princeps
ENSMODG00000016882	RPUSD1	100	68.810	ENSODEG00000016945	RPUSD1	100	68.489	Octodon_degus
ENSMODG00000016882	RPUSD1	98	58.861	ENSONIG00000015672	rpusd1	99	61.438	Oreochromis_niloticus
ENSMODG00000016882	RPUSD1	99	62.829	ENSORLG00000013009	rpusd1	99	62.829	Oryzias_latipes
ENSMODG00000016882	RPUSD1	99	62.500	ENSORLG00020010382	rpusd1	99	62.500	Oryzias_latipes_hni
ENSMODG00000016882	RPUSD1	99	61.842	ENSORLG00015021354	rpusd1	99	61.842	Oryzias_latipes_hsok
ENSMODG00000016882	RPUSD1	99	60.191	ENSOMEG00000021426	rpusd1	99	60.191	Oryzias_melastigma
ENSMODG00000016882	RPUSD1	100	68.038	ENSOGAG00000003795	RPUSD1	100	67.722	Otolemur_garnettii
ENSMODG00000016882	RPUSD1	100	69.872	ENSOARG00000014254	RPUSD1	100	69.872	Ovis_aries
ENSMODG00000016882	RPUSD1	100	65.615	ENSPPAG00000034797	RPUSD1	100	64.780	Pan_paniscus
ENSMODG00000016882	RPUSD1	100	70.227	ENSPPRG00000012389	RPUSD1	100	69.903	Panthera_pardus
ENSMODG00000016882	RPUSD1	100	70.550	ENSPTIG00000008545	RPUSD1	84	80.180	Panthera_tigris_altaica
ENSMODG00000016882	RPUSD1	100	65.615	ENSPTRG00000007565	RPUSD1	100	64.780	Pan_troglodytes
ENSMODG00000016882	RPUSD1	100	66.456	ENSPANG00000024401	RPUSD1	100	66.456	Papio_anubis
ENSMODG00000016882	RPUSD1	99	65.789	ENSPKIG00000018890	rpusd1	91	65.789	Paramormyrops_kingsleyae
ENSMODG00000016882	RPUSD1	99	73.355	ENSPSIG00000013945	RPUSD1	100	73.355	Pelodiscus_sinensis
ENSMODG00000016882	RPUSD1	97	62.542	ENSPMGG00000014950	rpusd1	99	61.716	Periophthalmus_magnuspinnatus
ENSMODG00000016882	RPUSD1	100	70.968	ENSPEMG00000000497	Rpusd1	100	71.613	Peromyscus_maniculatus_bairdii
ENSMODG00000016882	RPUSD1	99	50.820	ENSPMAG00000001563	rpusd1	100	50.820	Petromyzon_marinus
ENSMODG00000016882	RPUSD1	100	90.879	ENSPCIG00000021216	-	94	90.879	Phascolarctos_cinereus
ENSMODG00000016882	RPUSD1	99	62.706	ENSPFOG00000007946	rpusd1	99	62.706	Poecilia_formosa
ENSMODG00000016882	RPUSD1	99	62.706	ENSPLAG00000011925	rpusd1	99	62.706	Poecilia_latipinna
ENSMODG00000016882	RPUSD1	99	62.376	ENSPMEG00000002910	rpusd1	99	62.376	Poecilia_mexicana
ENSMODG00000016882	RPUSD1	99	62.376	ENSPREG00000019851	rpusd1	99	62.376	Poecilia_reticulata
ENSMODG00000016882	RPUSD1	100	55.449	ENSPCAG00000002258	RPUSD1	100	55.128	Procavia_capensis
ENSMODG00000016882	RPUSD1	100	66.772	ENSPCOG00000022582	RPUSD1	85	82.143	Propithecus_coquereli
ENSMODG00000016882	RPUSD1	100	65.190	ENSPVAG00000013104	RPUSD1	100	65.506	Pteropus_vampyrus
ENSMODG00000016882	RPUSD1	99	60.726	ENSPNYG00000024076	rpusd1	99	60.841	Pundamilia_nyererei
ENSMODG00000016882	RPUSD1	99	60.526	ENSPNAG00000013806	rpusd1	100	60.526	Pygocentrus_nattereri
ENSMODG00000016882	RPUSD1	100	70.968	ENSRNOG00000023639	Rpusd1	100	71.613	Rattus_norvegicus
ENSMODG00000016882	RPUSD1	100	66.772	ENSRBIG00000030238	RPUSD1	100	66.352	Rhinopithecus_bieti
ENSMODG00000016882	RPUSD1	100	66.772	ENSRROG00000036663	RPUSD1	100	66.352	Rhinopithecus_roxellana
ENSMODG00000016882	RPUSD1	100	67.638	ENSSBOG00000033063	RPUSD1	100	68.285	Saimiri_boliviensis_boliviensis
ENSMODG00000016882	RPUSD1	100	89.577	ENSSHAG00000013500	RPUSD1	100	89.251	Sarcophilus_harrisii
ENSMODG00000016882	RPUSD1	98	66.887	ENSSFOG00015014394	rpusd1	99	65.584	Scleropages_formosus
ENSMODG00000016882	RPUSD1	99	60.458	ENSSMAG00000008045	rpusd1	92	60.784	Scophthalmus_maximus
ENSMODG00000016882	RPUSD1	82	70.518	ENSSDUG00000001829	rpusd1	96	62.092	Seriola_dumerili
ENSMODG00000016882	RPUSD1	82	70.518	ENSSLDG00000020853	rpusd1	96	62.092	Seriola_lalandi_dorsalis
ENSMODG00000016882	RPUSD1	54	79.042	ENSSARG00000011187	-	100	79.042	Sorex_araneus
ENSMODG00000016882	RPUSD1	63	63.212	ENSSPUG00000005119	-	100	63.212	Sphenodon_punctatus
ENSMODG00000016882	RPUSD1	99	61.438	ENSSPAG00000012708	rpusd1	99	61.438	Stegastes_partitus
ENSMODG00000016882	RPUSD1	100	67.722	ENSSSCG00000008000	RPUSD1	98	75.591	Sus_scrofa
ENSMODG00000016882	RPUSD1	82	81.818	ENSTGUG00000015375	RPUSD1	100	81.818	Taeniopygia_guttata
ENSMODG00000016882	RPUSD1	99	59.804	ENSTRUG00000003041	rpusd1	98	60.261	Takifugu_rubripes
ENSMODG00000016882	RPUSD1	98	57.616	ENSTNIG00000002660	rpusd1	99	57.807	Tetraodon_nigroviridis
ENSMODG00000016882	RPUSD1	100	68.354	ENSTTRG00000010167	RPUSD1	100	68.671	Tursiops_truncatus
ENSMODG00000016882	RPUSD1	100	70.874	ENSUAMG00000012736	RPUSD1	100	70.550	Ursus_americanus
ENSMODG00000016882	RPUSD1	100	71.197	ENSUMAG00000021174	RPUSD1	100	70.874	Ursus_maritimus
ENSMODG00000016882	RPUSD1	100	70.550	ENSVVUG00000012357	RPUSD1	100	70.227	Vulpes_vulpes
ENSMODG00000016882	RPUSD1	100	67.732	ENSXETG00000007184	rpusd1	100	67.732	Xenopus_tropicalis
ENSMODG00000016882	RPUSD1	99	61.716	ENSXCOG00000017930	rpusd1	99	61.716	Xiphophorus_couchianus
ENSMODG00000016882	RPUSD1	99	61.716	ENSXMAG00000024084	rpusd1	99	61.716	Xiphophorus_maculatus