EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMODG00000016902 (Gene tree)
Gene ID: 100014372
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Monodelphis_domestica
Status: putative
Strand: Plus strand
Length: 60262 bases
Position: chr8:137916657-137976918
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMODP00000021091	PRP4	PF08799.11	4.2e-13	1	1
ENSMODP00000021091	Prp18	PF02840.15	1.4e-55	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMODT00000021463	-	1753	-	ENSMODP00000021091	359 (aa)	-	F6X1E0

Gene Model

Click here to download ENSMODG00000016902's gene model file

Pathways

Pathway ID	Pathway Name	Source
mdo03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMODG00000016902's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMODG00000016902	-	94	80.175	ENSMODG00000024043	-	98	80.175

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMODG00000016902	-	92	91.124	ENSG00000165630	PRPF18	98	96.708	Homo_sapiens
ENSMODG00000016902	-	92	80.178	ENSAPOG00000024177	prpf18	96	80.178	Acanthochromis_polyacanthus
ENSMODG00000016902	-	92	90.533	ENSAMEG00000013591	-	96	90.533	Ailuropoda_melanoleuca
ENSMODG00000016902	-	95	77.299	ENSACIG00000001186	prpf18	99	77.299	Amphilophus_citrinellus
ENSMODG00000016902	-	92	80.178	ENSAOCG00000006572	prpf18	92	80.178	Amphiprion_ocellaris
ENSMODG00000016902	-	92	80.178	ENSAPEG00000004564	prpf18	96	80.178	Amphiprion_percula
ENSMODG00000016902	-	95	77.011	ENSATEG00000000303	prpf18	99	77.011	Anabas_testudineus
ENSMODG00000016902	-	92	86.607	ENSAPLG00000003387	-	96	86.607	Anas_platyrhynchos
ENSMODG00000016902	-	92	88.824	ENSACAG00000000818	-	96	88.824	Anolis_carolinensis
ENSMODG00000016902	-	91	95.385	ENSANAG00000037445	-	97	95.385	Aotus_nancymaae
ENSMODG00000016902	-	91	80.982	ENSACLG00000026296	prpf18	96	80.982	Astatotilapia_calliptera
ENSMODG00000016902	-	91	83.436	ENSAMXG00000012848	prpf18	96	81.361	Astyanax_mexicanus
ENSMODG00000016902	-	92	92.308	ENSBTAG00000017244	PRPF18	96	92.308	Bos_taurus
ENSMODG00000016902	-	90	35.562	WBGene00009320	F32B6.3	90	35.562	Caenorhabditis_elegans
ENSMODG00000016902	-	92	93.958	ENSCJAG00000009432	-	96	93.958	Callithrix_jacchus
ENSMODG00000016902	-	92	90.533	ENSCAFG00000004735	-	96	90.533	Canis_familiaris
ENSMODG00000016902	-	91	92.661	ENSCAFG00020007712	-	96	90.533	Canis_lupus_dingo
ENSMODG00000016902	-	92	92.308	ENSCHIG00000000499	-	96	92.308	Capra_hircus
ENSMODG00000016902	-	92	92.308	ENSTSYG00000003517	-	96	92.308	Carlito_syrichta
ENSMODG00000016902	-	92	92.899	ENSCPOG00000021069	-	96	92.899	Cavia_porcellus
ENSMODG00000016902	-	91	95.385	ENSCCAG00000036822	-	97	95.385	Cebus_capucinus
ENSMODG00000016902	-	92	80.178	ENSCATG00000016633	-	96	80.178	Cercocebus_atys
ENSMODG00000016902	-	92	92.308	ENSCLAG00000011770	-	96	92.308	Chinchilla_lanigera
ENSMODG00000016902	-	92	93.195	ENSCSAG00000013109	-	96	93.195	Chlorocebus_sabaeus
ENSMODG00000016902	-	92	86.648	ENSCPBG00000003100	-	96	87.216	Chrysemys_picta_bellii
ENSMODG00000016902	-	90	50.904	ENSCING00000020481	-	90	50.301	Ciona_intestinalis
ENSMODG00000016902	-	90	52.147	ENSCSAVG00000010546	-	91	51.227	Ciona_savignyi
ENSMODG00000016902	-	92	92.899	ENSCANG00000034900	-	96	92.899	Colobus_angolensis_palliatus
ENSMODG00000016902	-	92	91.124	ENSCGRG00001023665	Prpf18	96	91.124	Cricetulus_griseus_chok1gshd
ENSMODG00000016902	-	92	91.124	ENSCGRG00000014690	Prpf18	96	91.124	Cricetulus_griseus_crigri
ENSMODG00000016902	-	95	75.862	ENSCSEG00000005536	prpf18	99	75.862	Cynoglossus_semilaevis
ENSMODG00000016902	-	92	78.698	ENSCVAG00000012401	prpf18	96	78.698	Cyprinodon_variegatus
ENSMODG00000016902	-	92	80.178	ENSDARG00000058306	prpf18	96	80.178	Danio_rerio
ENSMODG00000016902	-	92	90.828	ENSDNOG00000035607	-	96	90.828	Dasypus_novemcinctus
ENSMODG00000016902	-	92	90.237	ENSDORG00000000858	Prpf18	96	90.237	Dipodomys_ordii
ENSMODG00000016902	-	91	47.077	FBgn0027784	Prp18	91	47.077	Drosophila_melanogaster
ENSMODG00000016902	-	95	78.448	ENSETEG00000015060	-	99	78.448	Echinops_telfairi
ENSMODG00000016902	-	95	62.069	ENSEBUG00000016502	prpf18	98	61.254	Eptatretus_burgeri
ENSMODG00000016902	-	92	92.899	ENSEASG00005019373	-	96	92.899	Equus_asinus_asinus
ENSMODG00000016902	-	92	92.899	ENSECAG00000006997	PRPF18	96	92.899	Equus_caballus
ENSMODG00000016902	-	91	59.077	ENSEEUG00000001171	-	100	59.077	Erinaceus_europaeus
ENSMODG00000016902	-	95	76.504	ENSELUG00000022190	prpf18	99	76.504	Esox_lucius
ENSMODG00000016902	-	92	92.308	ENSFCAG00000004436	-	96	92.308	Felis_catus
ENSMODG00000016902	-	91	92.615	ENSFALG00000001912	-	97	92.615	Ficedula_albicollis
ENSMODG00000016902	-	90	60.802	ENSFDAG00000010713	-	88	60.802	Fukomys_damarensis
ENSMODG00000016902	-	86	91.456	ENSFDAG00000014026	-	96	91.456	Fukomys_damarensis
ENSMODG00000016902	-	71	84.674	ENSFHEG00000020125	prpf18	93	84.706	Fundulus_heteroclitus
ENSMODG00000016902	-	91	78.769	ENSGMOG00000012210	prpf18	92	78.769	Gadus_morhua
ENSMODG00000016902	-	92	89.941	ENSGALG00000043593	-	96	89.941	Gallus_gallus
ENSMODG00000016902	-	92	77.811	ENSGAFG00000006034	prpf18	96	77.811	Gambusia_affinis
ENSMODG00000016902	-	95	76.149	ENSGACG00000012232	prpf18	99	76.149	Gasterosteus_aculeatus
ENSMODG00000016902	-	92	90.237	ENSGAGG00000016878	-	96	90.237	Gopherus_agassizii
ENSMODG00000016902	-	91	95.413	ENSGGOG00000025188	-	97	95.413	Gorilla_gorilla
ENSMODG00000016902	-	92	78.994	ENSHBUG00000010264	prpf18	96	78.994	Haplochromis_burtoni
ENSMODG00000016902	-	92	90.533	ENSHGLG00000018534	PRPF18	96	90.533	Heterocephalus_glaber_female
ENSMODG00000016902	-	86	91.772	ENSHGLG00100012161	-	94	91.772	Heterocephalus_glaber_male
ENSMODG00000016902	-	95	77.586	ENSHCOG00000015987	prpf18	99	77.586	Hippocampus_comes
ENSMODG00000016902	-	92	78.529	ENSIPUG00000007432	prpf18	96	79.412	Ictalurus_punctatus
ENSMODG00000016902	-	92	91.716	ENSSTOG00000008735	-	96	91.716	Ictidomys_tridecemlineatus
ENSMODG00000016902	-	92	65.782	ENSJJAG00000015191	-	95	65.782	Jaculus_jaculus
ENSMODG00000016902	-	92	91.124	ENSJJAG00000024041	-	96	91.124	Jaculus_jaculus
ENSMODG00000016902	-	92	78.402	ENSKMAG00000012124	prpf18	96	78.402	Kryptolebias_marmoratus
ENSMODG00000016902	-	94	74.927	ENSLBEG00000028466	prpf18	99	74.138	Labrus_bergylta
ENSMODG00000016902	-	92	82.840	ENSLACG00000009885	prpf18	96	82.840	Latimeria_chalumnae
ENSMODG00000016902	-	92	86.686	ENSLOCG00000016736	prpf18	96	86.686	Lepisosteus_oculatus
ENSMODG00000016902	-	92	91.124	ENSLAFG00000007753	-	96	91.124	Loxodonta_africana
ENSMODG00000016902	-	91	95.413	ENSMFAG00000000540	-	98	95.413	Macaca_fascicularis
ENSMODG00000016902	-	91	95.413	ENSMMUG00000015071	PRPF18	98	95.413	Macaca_mulatta
ENSMODG00000016902	-	91	95.413	ENSMNEG00000024679	-	98	95.413	Macaca_nemestrina
ENSMODG00000016902	-	76	92.336	ENSMLEG00000031715	-	91	92.336	Mandrillus_leucophaeus
ENSMODG00000016902	-	95	77.011	ENSMAMG00000006610	prpf18	99	77.011	Mastacembelus_armatus
ENSMODG00000016902	-	92	78.994	ENSMZEG00005019392	prpf18	96	78.994	Maylandia_zebra
ENSMODG00000016902	-	92	87.574	ENSMGAG00000005023	-	96	87.574	Meleagris_gallopavo
ENSMODG00000016902	-	91	94.817	ENSMICG00000006572	-	97	94.817	Microcebus_murinus
ENSMODG00000016902	-	92	91.124	ENSMOCG00000021468	Prpf18	96	91.124	Microtus_ochrogaster
ENSMODG00000016902	-	95	76.149	ENSMMOG00000013012	prpf18	99	76.149	Mola_mola
ENSMODG00000016902	-	91	75.077	ENSMALG00000005486	prpf18	92	75.692	Monopterus_albus
ENSMODG00000016902	-	92	90.533	MGP_CAROLIEiJ_G0023143	Prpf18	100	98.630	Mus_caroli
ENSMODG00000016902	-	92	90.237	ENSMUSG00000039449	Prpf18	100	98.630	Mus_musculus
ENSMODG00000016902	-	92	90.828	MGP_PahariEiJ_G0019203	Prpf18	100	98.630	Mus_pahari
ENSMODG00000016902	-	92	89.941	MGP_SPRETEiJ_G0024061	Prpf18	100	98.630	Mus_spretus
ENSMODG00000016902	-	92	90.237	ENSMPUG00000000938	-	96	90.237	Mustela_putorius_furo
ENSMODG00000016902	-	92	90.237	ENSMLUG00000009200	-	96	90.237	Myotis_lucifugus
ENSMODG00000016902	-	57	92.157	ENSNGAG00000023550	-	73	92.157	Nannospalax_galili
ENSMODG00000016902	-	92	90.533	ENSNGAG00000012500	-	96	90.533	Nannospalax_galili
ENSMODG00000016902	-	92	78.402	ENSNBRG00000001778	prpf18	96	78.402	Neolamprologus_brichardi
ENSMODG00000016902	-	92	93.195	ENSNLEG00000012186	-	96	93.195	Nomascus_leucogenys
ENSMODG00000016902	-	67	76.016	ENSMEUG00000005032	-	71	76.016	Notamacropus_eugenii
ENSMODG00000016902	-	76	75.182	ENSOPRG00000002153	-	100	75.182	Ochotona_princeps
ENSMODG00000016902	-	92	91.420	ENSODEG00000003770	-	96	91.420	Octodon_degus
ENSMODG00000016902	-	92	78.994	ENSONIG00000014854	prpf18	94	78.994	Oreochromis_niloticus
ENSMODG00000016902	-	95	90.805	ENSOANG00000015404	-	99	90.805	Ornithorhynchus_anatinus
ENSMODG00000016902	-	92	90.828	ENSOCUG00000027756	-	92	91.022	Oryctolagus_cuniculus
ENSMODG00000016902	-	95	77.299	ENSORLG00000010293	prpf18	99	77.299	Oryzias_latipes
ENSMODG00000016902	-	95	77.299	ENSORLG00020001530	prpf18	99	77.299	Oryzias_latipes_hni
ENSMODG00000016902	-	95	77.011	ENSORLG00015013705	prpf18	99	77.011	Oryzias_latipes_hsok
ENSMODG00000016902	-	92	79.882	ENSOMEG00000009167	prpf18	96	79.882	Oryzias_melastigma
ENSMODG00000016902	-	92	90.237	ENSOGAG00000007294	-	96	90.237	Otolemur_garnettii
ENSMODG00000016902	-	92	92.308	ENSOARG00000006243	-	96	92.308	Ovis_aries
ENSMODG00000016902	-	92	93.195	ENSPPAG00000041959	-	96	93.195	Pan_paniscus
ENSMODG00000016902	-	92	90.237	ENSPPRG00000000107	-	96	90.237	Panthera_pardus
ENSMODG00000016902	-	92	90.533	ENSPTIG00000021094	-	96	90.533	Panthera_tigris_altaica
ENSMODG00000016902	-	92	93.195	ENSPTRG00000002306	PRPF18	96	93.195	Pan_troglodytes
ENSMODG00000016902	-	92	92.899	ENSPANG00000023346	-	96	92.899	Papio_anubis
ENSMODG00000016902	-	85	96.296	ENSPKIG00000014128	prpf18	95	78.736	Paramormyrops_kingsleyae
ENSMODG00000016902	-	92	87.870	ENSPSIG00000016064	-	96	87.870	Pelodiscus_sinensis
ENSMODG00000016902	-	91	75.385	ENSPMGG00000016486	prpf18	92	75.385	Periophthalmus_magnuspinnatus
ENSMODG00000016902	-	92	90.828	ENSPEMG00000013704	Prpf18	96	90.828	Peromyscus_maniculatus_bairdii
ENSMODG00000016902	-	91	72.923	ENSPMAG00000000204	prpf18	92	72.923	Petromyzon_marinus
ENSMODG00000016902	-	91	98.165	ENSPCIG00000012963	-	99	98.165	Phascolarctos_cinereus
ENSMODG00000016902	-	92	78.402	ENSPFOG00000017611	prpf18	96	78.402	Poecilia_formosa
ENSMODG00000016902	-	92	77.811	ENSPLAG00000000369	prpf18	96	77.811	Poecilia_latipinna
ENSMODG00000016902	-	92	78.402	ENSPMEG00000005183	prpf18	96	78.402	Poecilia_mexicana
ENSMODG00000016902	-	95	75.862	ENSPREG00000015232	prpf18	99	75.862	Poecilia_reticulata
ENSMODG00000016902	-	92	90.828	ENSPPYG00000002101	PRPF18	96	90.828	Pongo_abelii
ENSMODG00000016902	-	92	73.591	ENSPCAG00000010833	-	96	73.591	Procavia_capensis
ENSMODG00000016902	-	92	84.024	ENSPCOG00000013057	-	96	84.024	Propithecus_coquereli
ENSMODG00000016902	-	82	59.864	ENSPVAG00000002947	-	83	59.864	Pteropus_vampyrus
ENSMODG00000016902	-	92	78.994	ENSPNYG00000003554	prpf18	96	78.994	Pundamilia_nyererei
ENSMODG00000016902	-	92	81.657	ENSPNAG00000023151	prpf18	96	81.657	Pygocentrus_nattereri
ENSMODG00000016902	-	91	95.385	ENSRNOG00000018396	Prpf18	94	95.385	Rattus_norvegicus
ENSMODG00000016902	-	92	92.604	ENSRBIG00000028028	-	96	92.604	Rhinopithecus_bieti
ENSMODG00000016902	-	92	92.899	ENSRROG00000040695	-	96	92.899	Rhinopithecus_roxellana
ENSMODG00000016902	-	91	95.385	ENSSBOG00000034482	-	97	95.385	Saimiri_boliviensis_boliviensis
ENSMODG00000016902	-	95	91.379	ENSSHAG00000016463	-	99	91.379	Sarcophilus_harrisii
ENSMODG00000016902	-	91	76.308	ENSSHAG00000009669	-	92	76.308	Sarcophilus_harrisii
ENSMODG00000016902	-	65	48.927	ENSSFOG00015021154	-	89	48.927	Scleropages_formosus
ENSMODG00000016902	-	92	80.178	ENSSFOG00015022118	prpf18	96	71.720	Scleropages_formosus
ENSMODG00000016902	-	92	78.171	ENSSMAG00000005308	prpf18	97	78.171	Scophthalmus_maximus
ENSMODG00000016902	-	95	78.448	ENSSDUG00000015428	prpf18	99	78.448	Seriola_dumerili
ENSMODG00000016902	-	95	78.448	ENSSLDG00000023989	prpf18	99	78.448	Seriola_lalandi_dorsalis
ENSMODG00000016902	-	76	72.894	ENSSARG00000005307	-	77	72.894	Sorex_araneus
ENSMODG00000016902	-	92	88.166	ENSSPUG00000002619	-	96	88.166	Sphenodon_punctatus
ENSMODG00000016902	-	95	78.448	ENSSPAG00000019502	prpf18	99	78.448	Stegastes_partitus
ENSMODG00000016902	-	92	92.604	ENSSSCG00000026354	-	96	92.604	Sus_scrofa
ENSMODG00000016902	-	92	87.574	ENSTGUG00000002286	-	96	87.574	Taeniopygia_guttata
ENSMODG00000016902	-	92	76.627	ENSTRUG00000011278	prpf18	96	76.627	Takifugu_rubripes
ENSMODG00000016902	-	92	76.923	ENSTNIG00000000911	prpf18	96	76.923	Tetraodon_nigroviridis
ENSMODG00000016902	-	72	84.615	ENSTBEG00000013011	-	75	84.615	Tupaia_belangeri
ENSMODG00000016902	-	92	90.828	ENSTTRG00000011117	PRPF18	96	90.828	Tursiops_truncatus
ENSMODG00000016902	-	84	92.182	ENSUAMG00000001815	-	89	92.182	Ursus_americanus
ENSMODG00000016902	-	92	85.799	ENSUMAG00000012329	-	96	85.799	Ursus_maritimus
ENSMODG00000016902	-	92	84.911	ENSVPAG00000011486	-	96	84.911	Vicugna_pacos
ENSMODG00000016902	-	92	92.604	ENSVVUG00000005453	-	96	92.604	Vulpes_vulpes
ENSMODG00000016902	-	91	78.182	ENSXETG00000024057	prpf18	92	78.659	Xenopus_tropicalis
ENSMODG00000016902	-	92	77.353	ENSXCOG00000020414	prpf18	96	77.353	Xiphophorus_couchianus
ENSMODG00000016902	-	92	78.402	ENSXMAG00000004713	prpf18	88	78.402	Xiphophorus_maculatus