EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSMODG00000017051 (Gene tree)
Gene ID: 100618603
Gene Symbol: PRPF6
Alias: ANT-1|C20orf14|Prp6|RP60|SNRNP102|TOM|U5-102K|bB152O15.1|hPrp6
Full Name: pre-mRNA processing factor 6
Gene Type: protein_coding
Species: Monodelphis_domestica
Status: putative
Strand: Minus strand
Length: 41950 bases
Position: chr1:472621592-472663541
Accession: 15860
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMODP00000021275	PRP1_N	PF06424.12	1.1e-57	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMODT00000021649	PRPF6-201	2654	-	ENSMODP00000021275	820 (aa)	-	F6XZE3

Gene Model

Click here to download ENSMODG00000017051's gene model file

Pathways

Pathway ID	Pathway Name	Source
mdo03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMODG00000017051's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMODG00000017051	PRPF6	99	98.397	ENSG00000101161	PRPF6	99	98.397	Homo_sapiens
ENSMODG00000017051	PRPF6	99	93.711	ENSAPOG00000010395	prpf6	96	94.205	Acanthochromis_polyacanthus
ENSMODG00000017051	PRPF6	99	97.906	ENSAMEG00000001916	PRPF6	98	97.906	Ailuropoda_melanoleuca
ENSMODG00000017051	PRPF6	99	93.465	ENSACIG00000019862	prpf6	93	93.958	Amphilophus_citrinellus
ENSMODG00000017051	PRPF6	99	93.711	ENSAOCG00000012988	prpf6	93	94.205	Amphiprion_ocellaris
ENSMODG00000017051	PRPF6	99	87.980	ENSAPEG00000008301	prpf6	88	88.476	Amphiprion_percula
ENSMODG00000017051	PRPF6	99	93.218	ENSATEG00000005581	prpf6	93	93.711	Anabas_testudineus
ENSMODG00000017051	PRPF6	99	98.520	ENSACAG00000006464	PRPF6	95	98.520	Anolis_carolinensis
ENSMODG00000017051	PRPF6	99	98.274	ENSANAG00000012661	PRPF6	99	98.274	Aotus_nancymaae
ENSMODG00000017051	PRPF6	99	93.342	ENSACLG00000025875	prpf6	93	93.835	Astatotilapia_calliptera
ENSMODG00000017051	PRPF6	99	93.333	ENSAMXG00000001929	prpf6	93	93.827	Astyanax_mexicanus
ENSMODG00000017051	PRPF6	99	98.890	ENSBTAG00000011656	PRPF6	99	98.890	Bos_taurus
ENSMODG00000017051	PRPF6	99	98.274	ENSCJAG00000010616	PRPF6	99	98.274	Callithrix_jacchus
ENSMODG00000017051	PRPF6	99	99.014	ENSCAFG00000013165	PRPF6	99	99.014	Canis_familiaris
ENSMODG00000017051	PRPF6	99	99.014	ENSCAFG00020002050	PRPF6	99	99.014	Canis_lupus_dingo
ENSMODG00000017051	PRPF6	99	98.890	ENSCHIG00000018187	PRPF6	99	98.890	Capra_hircus
ENSMODG00000017051	PRPF6	99	98.644	ENSTSYG00000007814	PRPF6	99	98.644	Carlito_syrichta
ENSMODG00000017051	PRPF6	96	97.586	ENSCAPG00000015077	PRPF6	99	97.586	Cavia_aperea
ENSMODG00000017051	PRPF6	99	99.014	ENSCPOG00000007518	PRPF6	99	99.014	Cavia_porcellus
ENSMODG00000017051	PRPF6	99	98.276	ENSCCAG00000024564	PRPF6	97	98.276	Cebus_capucinus
ENSMODG00000017051	PRPF6	99	98.520	ENSCATG00000037473	PRPF6	99	98.520	Cercocebus_atys
ENSMODG00000017051	PRPF6	99	94.451	ENSCLAG00000003854	PRPF6	99	94.451	Chinchilla_lanigera
ENSMODG00000017051	PRPF6	99	91.525	ENSCSAG00000016742	PRPF6	99	92.411	Chlorocebus_sabaeus
ENSMODG00000017051	PRPF6	84	80.813	ENSCHOG00000003315	-	100	80.813	Choloepus_hoffmanni
ENSMODG00000017051	PRPF6	99	99.137	ENSCPBG00000013964	PRPF6	95	99.137	Chrysemys_picta_bellii
ENSMODG00000017051	PRPF6	99	72.727	ENSCING00000008817	-	96	72.727	Ciona_intestinalis
ENSMODG00000017051	PRPF6	99	98.274	ENSCANG00000038230	PRPF6	99	98.274	Colobus_angolensis_palliatus
ENSMODG00000017051	PRPF6	99	98.767	ENSCGRG00001022666	Prpf6	99	98.767	Cricetulus_griseus_chok1gshd
ENSMODG00000017051	PRPF6	99	87.670	ENSCSEG00000018561	prpf6	99	88.163	Cynoglossus_semilaevis
ENSMODG00000017051	PRPF6	99	93.465	ENSCVAG00000010550	prpf6	96	93.958	Cyprinodon_variegatus
ENSMODG00000017051	PRPF6	99	93.218	ENSDARG00000091367	prpf6	96	93.711	Danio_rerio
ENSMODG00000017051	PRPF6	99	98.027	ENSDNOG00000040544	PRPF6	97	98.027	Dasypus_novemcinctus
ENSMODG00000017051	PRPF6	89	98.072	ENSDORG00000005406	Prpf6	97	98.072	Dipodomys_ordii
ENSMODG00000017051	PRPF6	99	71.062	FBgn0036828	CG6841	96	71.551	Drosophila_melanogaster
ENSMODG00000017051	PRPF6	82	96.570	ENSETEG00000004447	PRPF6	84	96.570	Echinops_telfairi
ENSMODG00000017051	PRPF6	99	87.348	ENSEBUG00000008835	prpf6	97	87.348	Eptatretus_burgeri
ENSMODG00000017051	PRPF6	99	99.137	ENSEASG00005023115	PRPF6	99	99.137	Equus_asinus_asinus
ENSMODG00000017051	PRPF6	99	93.415	ENSECAG00000013983	PRPF6	97	94.328	Equus_caballus
ENSMODG00000017051	PRPF6	88	100.000	ENSEEUG00000000180	PRPF6	80	100.000	Erinaceus_europaeus
ENSMODG00000017051	PRPF6	99	92.478	ENSELUG00000001945	prpf6	93	92.478	Esox_lucius
ENSMODG00000017051	PRPF6	99	99.137	ENSFCAG00000001183	PRPF6	99	99.137	Felis_catus
ENSMODG00000017051	PRPF6	99	91.245	ENSFALG00000006046	-	97	91.245	Ficedula_albicollis
ENSMODG00000017051	PRPF6	99	98.767	ENSFALG00000010326	-	94	98.767	Ficedula_albicollis
ENSMODG00000017051	PRPF6	99	97.287	ENSFDAG00000006451	PRPF6	99	98.936	Fukomys_damarensis
ENSMODG00000017051	PRPF6	99	94.328	ENSFHEG00000000560	prpf6	94	94.328	Fundulus_heteroclitus
ENSMODG00000017051	PRPF6	99	89.461	ENSGMOG00000015622	prpf6	98	89.461	Gadus_morhua
ENSMODG00000017051	PRPF6	99	98.520	ENSGALG00000006001	PRPF6	99	98.520	Gallus_gallus
ENSMODG00000017051	PRPF6	99	88.409	ENSGAFG00000021109	prpf6	93	88.903	Gambusia_affinis
ENSMODG00000017051	PRPF6	99	92.232	ENSGACG00000002576	prpf6	97	92.232	Gasterosteus_aculeatus
ENSMODG00000017051	PRPF6	99	99.014	ENSGAGG00000008653	PRPF6	95	99.014	Gopherus_agassizii
ENSMODG00000017051	PRPF6	99	98.397	ENSGGOG00000016876	PRPF6	99	98.397	Gorilla_gorilla
ENSMODG00000017051	PRPF6	99	93.342	ENSHBUG00000004496	prpf6	93	93.835	Haplochromis_burtoni
ENSMODG00000017051	PRPF6	99	98.890	ENSHGLG00000009222	PRPF6	99	98.890	Heterocephalus_glaber_female
ENSMODG00000017051	PRPF6	96	98.856	ENSHGLG00100016600	PRPF6	99	98.856	Heterocephalus_glaber_male
ENSMODG00000017051	PRPF6	99	92.109	ENSHCOG00000011513	prpf6	93	92.602	Hippocampus_comes
ENSMODG00000017051	PRPF6	99	93.835	ENSIPUG00000004912	prpf6	94	93.835	Ictalurus_punctatus
ENSMODG00000017051	PRPF6	99	95.690	ENSSTOG00000002922	PRPF6	99	95.690	Ictidomys_tridecemlineatus
ENSMODG00000017051	PRPF6	99	99.014	ENSJJAG00000000836	Prpf6	99	99.014	Jaculus_jaculus
ENSMODG00000017051	PRPF6	99	92.439	ENSKMAG00000017800	prpf6	93	92.927	Kryptolebias_marmoratus
ENSMODG00000017051	PRPF6	99	91.829	ENSLBEG00000012582	prpf6	96	91.829	Labrus_bergylta
ENSMODG00000017051	PRPF6	99	94.634	ENSLOCG00000004827	prpf6	96	93.537	Lepisosteus_oculatus
ENSMODG00000017051	PRPF6	99	98.027	ENSLAFG00000005272	PRPF6	99	98.027	Loxodonta_africana
ENSMODG00000017051	PRPF6	99	98.274	ENSMFAG00000037542	PRPF6	99	98.274	Macaca_fascicularis
ENSMODG00000017051	PRPF6	99	96.935	ENSMMUG00000015558	PRPF6	98	99.307	Macaca_mulatta
ENSMODG00000017051	PRPF6	99	85.276	ENSMNEG00000045555	PRPF6	87	85.276	Macaca_nemestrina
ENSMODG00000017051	PRPF6	99	93.588	ENSMAMG00000010718	prpf6	94	93.958	Mastacembelus_armatus
ENSMODG00000017051	PRPF6	92	92.819	ENSMZEG00005026539	prpf6	97	93.351	Maylandia_zebra
ENSMODG00000017051	PRPF6	99	93.342	ENSMZEG00005015261	-	97	93.835	Maylandia_zebra
ENSMODG00000017051	PRPF6	96	98.729	ENSMGAG00000006634	PRPF6	99	98.729	Meleagris_gallopavo
ENSMODG00000017051	PRPF6	99	98.767	ENSMAUG00000013969	Prpf6	99	98.767	Mesocricetus_auratus
ENSMODG00000017051	PRPF6	85	97.832	ENSMICG00000017793	PRPF6	96	97.832	Microcebus_murinus
ENSMODG00000017051	PRPF6	99	98.890	ENSMOCG00000001701	Prpf6	97	98.890	Microtus_ochrogaster
ENSMODG00000017051	PRPF6	99	92.848	ENSMMOG00000020419	prpf6	97	93.342	Mola_mola
ENSMODG00000017051	PRPF6	98	93.883	ENSMALG00000000089	prpf6	97	93.883	Monopterus_albus
ENSMODG00000017051	PRPF6	99	91.122	MGP_CAROLIEiJ_G0024814	Prpf6	100	100.000	Mus_caroli
ENSMODG00000017051	PRPF6	99	98.767	ENSMUSG00000002455	Prpf6	100	100.000	Mus_musculus
ENSMODG00000017051	PRPF6	99	98.767	MGP_PahariEiJ_G0026262	Prpf6	100	100.000	Mus_pahari
ENSMODG00000017051	PRPF6	99	98.767	MGP_SPRETEiJ_G0025741	Prpf6	100	100.000	Mus_spretus
ENSMODG00000017051	PRPF6	92	98.271	ENSMPUG00000008673	PRPF6	99	98.271	Mustela_putorius_furo
ENSMODG00000017051	PRPF6	99	99.014	ENSNGAG00000003365	Prpf6	99	99.014	Nannospalax_galili
ENSMODG00000017051	PRPF6	99	93.465	ENSNBRG00000015025	prpf6	93	93.958	Neolamprologus_brichardi
ENSMODG00000017051	PRPF6	99	98.274	ENSNLEG00000010208	PRPF6	99	98.274	Nomascus_leucogenys
ENSMODG00000017051	PRPF6	99	88.032	ENSMEUG00000009824	-	90	88.032	Notamacropus_eugenii
ENSMODG00000017051	PRPF6	99	92.109	ENSODEG00000004841	PRPF6	97	92.109	Octodon_degus
ENSMODG00000017051	PRPF6	99	93.342	ENSONIG00000017406	prpf6	93	93.835	Oreochromis_niloticus
ENSMODG00000017051	PRPF6	99	99.507	ENSOANG00000004920	PRPF6	99	99.507	Ornithorhynchus_anatinus
ENSMODG00000017051	PRPF6	99	95.684	ENSOCUG00000014151	PRPF6	99	95.684	Oryctolagus_cuniculus
ENSMODG00000017051	PRPF6	99	93.711	ENSORLG00000009592	prpf6	96	93.711	Oryzias_latipes
ENSMODG00000017051	PRPF6	99	93.835	ENSORLG00020001458	prpf6	96	93.835	Oryzias_latipes_hni
ENSMODG00000017051	PRPF6	99	93.835	ENSORLG00015018762	prpf6	96	93.835	Oryzias_latipes_hsok
ENSMODG00000017051	PRPF6	99	93.342	ENSOMEG00000012174	prpf6	96	93.835	Oryzias_melastigma
ENSMODG00000017051	PRPF6	99	89.024	ENSOGAG00000007573	PRPF6	97	89.889	Otolemur_garnettii
ENSMODG00000017051	PRPF6	99	98.397	ENSOARG00000008776	PRPF6	99	98.397	Ovis_aries
ENSMODG00000017051	PRPF6	99	98.397	ENSPPAG00000008686	PRPF6	99	98.397	Pan_paniscus
ENSMODG00000017051	PRPF6	99	99.014	ENSPPRG00000008497	PRPF6	99	99.014	Panthera_pardus
ENSMODG00000017051	PRPF6	96	98.983	ENSPTIG00000011184	PRPF6	97	98.983	Panthera_tigris_altaica
ENSMODG00000017051	PRPF6	99	98.397	ENSPTRG00000013765	PRPF6	99	98.397	Pan_troglodytes
ENSMODG00000017051	PRPF6	99	98.150	ENSPANG00000024135	PRPF6	99	98.150	Papio_anubis
ENSMODG00000017051	PRPF6	99	94.821	ENSPKIG00000005627	prpf6	97	95.314	Paramormyrops_kingsleyae
ENSMODG00000017051	PRPF6	92	99.202	ENSPSIG00000007717	PRPF6	99	99.202	Pelodiscus_sinensis
ENSMODG00000017051	PRPF6	99	90.999	ENSPMGG00000008925	prpf6	94	91.245	Periophthalmus_magnuspinnatus
ENSMODG00000017051	PRPF6	99	98.644	ENSPEMG00000016036	Prpf6	99	98.644	Peromyscus_maniculatus_bairdii
ENSMODG00000017051	PRPF6	99	87.683	ENSPMAG00000006144	prpf6	96	87.683	Petromyzon_marinus
ENSMODG00000017051	PRPF6	99	99.753	ENSPCIG00000017909	PRPF6	97	99.753	Phascolarctos_cinereus
ENSMODG00000017051	PRPF6	99	93.958	ENSPFOG00000006431	prpf6	93	94.451	Poecilia_formosa
ENSMODG00000017051	PRPF6	99	93.835	ENSPLAG00000005974	prpf6	93	94.328	Poecilia_latipinna
ENSMODG00000017051	PRPF6	99	94.081	ENSPMEG00000009977	prpf6	93	94.575	Poecilia_mexicana
ENSMODG00000017051	PRPF6	99	93.958	ENSPREG00000017993	prpf6	89	94.451	Poecilia_reticulata
ENSMODG00000017051	PRPF6	99	97.781	ENSPPYG00000011256	PRPF6	99	97.781	Pongo_abelii
ENSMODG00000017051	PRPF6	96	99.673	ENSPCAG00000006536	PRPF6	83	99.673	Procavia_capensis
ENSMODG00000017051	PRPF6	99	97.904	ENSPCOG00000016881	PRPF6	97	97.904	Propithecus_coquereli
ENSMODG00000017051	PRPF6	99	92.848	ENSPVAG00000014316	PRPF6	99	92.848	Pteropus_vampyrus
ENSMODG00000017051	PRPF6	99	73.780	ENSPNYG00000001939	prpf6	93	80.877	Pundamilia_nyererei
ENSMODG00000017051	PRPF6	99	93.835	ENSPNAG00000015606	prpf6	93	94.328	Pygocentrus_nattereri
ENSMODG00000017051	PRPF6	99	98.644	ENSRNOG00000051498	Prpf6	99	98.644	Rattus_norvegicus
ENSMODG00000017051	PRPF6	99	98.274	ENSRBIG00000043613	PRPF6	99	98.274	Rhinopithecus_bieti
ENSMODG00000017051	PRPF6	99	98.276	ENSRROG00000040969	PRPF6	98	97.924	Rhinopithecus_roxellana
ENSMODG00000017051	PRPF6	92	95.044	ENSSBOG00000020632	PRPF6	91	95.044	Saimiri_boliviensis_boliviensis
ENSMODG00000017051	PRPF6	99	99.753	ENSSHAG00000016810	PRPF6	97	99.753	Sarcophilus_harrisii
ENSMODG00000017051	PRPF6	98	95.256	ENSSFOG00015020859	prpf6	97	95.755	Scleropages_formosus
ENSMODG00000017051	PRPF6	99	92.602	ENSSMAG00000008112	prpf6	93	92.602	Scophthalmus_maximus
ENSMODG00000017051	PRPF6	99	93.218	ENSSDUG00000016142	prpf6	96	93.711	Seriola_dumerili
ENSMODG00000017051	PRPF6	99	93.218	ENSSLDG00000025283	prpf6	99	91.574	Seriola_lalandi_dorsalis
ENSMODG00000017051	PRPF6	92	97.739	ENSSPUG00000018260	PRPF6	99	97.739	Sphenodon_punctatus
ENSMODG00000017051	PRPF6	99	93.342	ENSSPAG00000015850	prpf6	93	93.835	Stegastes_partitus
ENSMODG00000017051	PRPF6	99	97.805	ENSSSCG00000029119	PRPF6	97	98.670	Sus_scrofa
ENSMODG00000017051	PRPF6	99	98.890	ENSTGUG00000007221	PRPF6	99	98.890	Taeniopygia_guttata
ENSMODG00000017051	PRPF6	99	92.478	ENSTRUG00000002920	prpf6	93	92.972	Takifugu_rubripes
ENSMODG00000017051	PRPF6	99	85.049	ENSTNIG00000017873	prpf6	97	85.539	Tetraodon_nigroviridis
ENSMODG00000017051	PRPF6	85	98.895	ENSTBEG00000005348	PRPF6	67	98.895	Tupaia_belangeri
ENSMODG00000017051	PRPF6	99	98.520	ENSTTRG00000013068	PRPF6	99	98.520	Tursiops_truncatus
ENSMODG00000017051	PRPF6	97	98.862	ENSUMAG00000021631	PRPF6	94	98.862	Ursus_maritimus
ENSMODG00000017051	PRPF6	99	99.014	ENSVVUG00000014948	PRPF6	99	99.014	Vulpes_vulpes
ENSMODG00000017051	PRPF6	99	96.671	ENSXETG00000012054	prpf6	94	96.671	Xenopus_tropicalis
ENSMODG00000017051	PRPF6	99	93.958	ENSXCOG00000008082	prpf6	93	94.451	Xiphophorus_couchianus
ENSMODG00000017051	PRPF6	99	93.958	ENSXMAG00000015581	prpf6	93	94.451	Xiphophorus_maculatus