EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMODG00000017295 (Gene tree)
Gene ID: 100619852
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Monodelphis_domestica
Status: putative
Strand: Minus strand
Length: 6169 bases
Position: chr2:188314039-188320207
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMODP00000021576	MMR_HSR1	PF01926.23	7.2e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMODT00000021952	-	717	-	ENSMODP00000021576	238 (aa)	-	F6SLZ4

Gene Model

Click here to download ENSMODG00000017295's gene model file

Pathways

Pathway ID	Pathway Name	Source
mdo04530	Tight junction	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMODG00000017295's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMODG00000017295	-	74	52.542	ENSMODG00000021452	RAB12	51	52.632
ENSMODG00000017295	-	73	44.068	ENSMODG00000008253	RAB18	86	44.068
ENSMODG00000017295	-	68	42.593	ENSMODG00000014793	RAB5A	88	42.593
ENSMODG00000017295	-	77	37.566	ENSMODG00000021443	RAB31	97	37.566
ENSMODG00000017295	-	71	55.882	ENSMODG00000009675	RAB15	91	50.777
ENSMODG00000017295	-	66	31.013	ENSMODG00000010838	-	70	31.013
ENSMODG00000017295	-	69	47.273	ENSMODG00000003841	-	76	47.273
ENSMODG00000017295	-	81	35.567	ENSMODG00000008949	RAB17	90	35.567
ENSMODG00000017295	-	78	44.000	ENSMODG00000009810	RAB11A	93	44.000
ENSMODG00000017295	-	81	36.788	ENSMODG00000016544	RAB22A	96	36.788
ENSMODG00000017295	-	69	43.636	ENSMODG00000019649	RAB14	77	43.636
ENSMODG00000017295	-	68	38.690	ENSMODG00000001915	RAB7B	83	38.690
ENSMODG00000017295	-	67	37.888	ENSMODG00000004590	NRAS	85	37.888
ENSMODG00000017295	-	85	50.732	ENSMODG00000003340	RAB1A	100	50.732
ENSMODG00000017295	-	58	46.479	ENSMODG00000016498	-	89	46.479
ENSMODG00000017295	-	76	40.984	ENSMODG00000016955	RAB25	86	40.984
ENSMODG00000017295	-	63	38.158	ENSMODG00000018720	RAB23	69	37.805
ENSMODG00000017295	-	61	38.356	ENSMODG00000016580	HRAS	69	38.356
ENSMODG00000017295	-	67	37.037	ENSMODG00000018565	MRAS	84	35.429
ENSMODG00000017295	-	70	48.810	ENSMODG00000006121	RAB2B	78	48.810
ENSMODG00000017295	-	67	39.130	ENSMODG00000025248	-	97	36.979
ENSMODG00000017295	-	71	55.030	ENSMODG00000022797	-	84	55.030
ENSMODG00000017295	-	70	39.429	ENSMODG00000025362	-	86	39.429
ENSMODG00000017295	-	68	42.515	ENSMODG00000023873	-	76	42.515
ENSMODG00000017295	-	67	39.752	ENSMODG00000017458	KRAS	97	37.500
ENSMODG00000017295	-	67	30.723	ENSMODG00000015869	DNAJC27	61	30.723
ENSMODG00000017295	-	66	41.772	ENSMODG00000018494	RAB6B	76	41.772
ENSMODG00000017295	-	69	43.114	ENSMODG00000024936	-	81	43.114
ENSMODG00000017295	-	68	37.725	ENSMODG00000008095	RAB7A	81	37.725
ENSMODG00000017295	-	71	48.521	ENSMODG00000008556	RAB2A	80	48.521
ENSMODG00000017295	-	76	46.409	ENSMODG00000004506	RAB30	89	46.409
ENSMODG00000017295	-	68	43.114	ENSMODG00000000118	RAB33B	75	43.114
ENSMODG00000017295	-	53	30.935	ENSMODG00000017011	ARFRP1	67	30.935
ENSMODG00000017295	-	69	41.818	ENSMODG00000018326	CRACR2A	98	41.818
ENSMODG00000017295	-	66	33.125	ENSMODG00000019295	RAB34	57	33.125
ENSMODG00000017295	-	68	41.667	ENSMODG00000011531	RAB9B	83	41.667
ENSMODG00000017295	-	66	42.405	ENSMODG00000007600	RAB6A	76	42.405
ENSMODG00000017295	-	80	53.403	ENSMODG00000008371	-	94	53.403
ENSMODG00000017295	-	66	48.780	ENSMODG00000013269	RAB33A	69	48.780

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMODG00000017295	-	84	92.574	ENSG00000143545	RAB13	99	92.574	Homo_sapiens
ENSMODG00000017295	-	84	76.617	ENSACIG00000008584	rab13	97	76.617	Amphilophus_citrinellus
ENSMODG00000017295	-	84	93.069	ENSANAG00000030247	-	99	93.069	Aotus_nancymaae
ENSMODG00000017295	-	84	80.500	ENSAMXG00000030712	rab13	99	80.500	Astyanax_mexicanus
ENSMODG00000017295	-	84	90.547	ENSBTAG00000017604	RAB13	99	90.547	Bos_taurus
ENSMODG00000017295	-	68	48.466	WBGene00019317	K02E10.1	75	48.466	Caenorhabditis_elegans
ENSMODG00000017295	-	79	95.263	ENSCJAG00000009933	-	99	93.069	Callithrix_jacchus
ENSMODG00000017295	-	84	90.050	ENSCHIG00000022271	-	99	90.050	Capra_hircus
ENSMODG00000017295	-	84	88.614	ENSCPOG00000011491	-	99	88.614	Cavia_porcellus
ENSMODG00000017295	-	84	92.574	ENSCCAG00000028502	-	99	92.574	Cebus_capucinus
ENSMODG00000017295	-	84	92.574	ENSCATG00000041779	-	99	92.574	Cercocebus_atys
ENSMODG00000017295	-	84	88.119	ENSCLAG00000006603	-	99	88.119	Chinchilla_lanigera
ENSMODG00000017295	-	84	92.574	ENSCANG00000036573	-	99	92.574	Colobus_angolensis_palliatus
ENSMODG00000017295	-	84	90.099	ENSCGRG00001021505	Rab13	99	90.099	Cricetulus_griseus_chok1gshd
ENSMODG00000017295	-	84	90.099	ENSCGRG00000012126	Rab13	99	90.099	Cricetulus_griseus_crigri
ENSMODG00000017295	-	84	77.941	ENSCSEG00000002358	rab13	99	77.941	Cynoglossus_semilaevis
ENSMODG00000017295	-	84	80.000	ENSDARG00000034771	rab13	99	80.000	Danio_rerio
ENSMODG00000017295	-	84	92.079	ENSDORG00000001591	Rab13	99	92.079	Dipodomys_ordii
ENSMODG00000017295	-	84	92.574	ENSEASG00005000683	-	99	92.574	Equus_asinus_asinus
ENSMODG00000017295	-	84	92.574	ENSECAG00000016551	RAB13	99	92.574	Equus_caballus
ENSMODG00000017295	-	84	87.129	ENSEEUG00000001233	-	99	87.129	Erinaceus_europaeus
ENSMODG00000017295	-	84	78.000	ENSELUG00000012801	rab13	98	78.000	Esox_lucius
ENSMODG00000017295	-	84	89.109	ENSFCAG00000045269	-	99	89.109	Felis_catus
ENSMODG00000017295	-	55	96.212	ENSFDAG00000014469	-	100	96.212	Fukomys_damarensis
ENSMODG00000017295	-	78	81.818	ENSFHEG00000021221	rab13	96	85.227	Fundulus_heteroclitus
ENSMODG00000017295	-	84	76.098	ENSGACG00000011925	rab13	99	76.098	Gasterosteus_aculeatus
ENSMODG00000017295	-	74	89.888	ENSGAGG00000000742	-	99	83.663	Gopherus_agassizii
ENSMODG00000017295	-	84	92.574	ENSGGOG00000023693	RAB13	99	92.574	Gorilla_gorilla
ENSMODG00000017295	-	84	87.129	ENSHGLG00000008749	RAB13	99	87.129	Heterocephalus_glaber_female
ENSMODG00000017295	-	84	87.129	ENSHGLG00100013608	RAB13	99	87.129	Heterocephalus_glaber_male
ENSMODG00000017295	-	74	84.746	ENSHCOG00000007440	rab13	97	84.746	Hippocampus_comes
ENSMODG00000017295	-	84	76.500	ENSIPUG00000003199	rab13	99	76.500	Ictalurus_punctatus
ENSMODG00000017295	-	84	91.584	ENSSTOG00000011222	-	99	91.584	Ictidomys_tridecemlineatus
ENSMODG00000017295	-	84	90.594	ENSJJAG00000010575	Rab13	99	90.594	Jaculus_jaculus
ENSMODG00000017295	-	84	76.500	ENSKMAG00000001908	rab13	99	76.500	Kryptolebias_marmoratus
ENSMODG00000017295	-	84	77.833	ENSLBEG00000026779	rab13	99	77.833	Labrus_bergylta
ENSMODG00000017295	-	74	76.796	ENSLACG00000008103	-	99	76.796	Latimeria_chalumnae
ENSMODG00000017295	-	84	92.574	ENSMFAG00000041018	RAB13	99	92.574	Macaca_fascicularis
ENSMODG00000017295	-	84	92.574	ENSMNEG00000028951	-	99	92.574	Macaca_nemestrina
ENSMODG00000017295	-	84	92.574	ENSMLEG00000042247	-	99	92.574	Mandrillus_leucophaeus
ENSMODG00000017295	-	84	77.340	ENSMAMG00000014602	rab13	99	77.340	Mastacembelus_armatus
ENSMODG00000017295	-	84	89.604	ENSMAUG00000015713	Rab13	99	89.604	Mesocricetus_auratus
ENSMODG00000017295	-	84	91.089	ENSMICG00000010340	-	99	91.089	Microcebus_murinus
ENSMODG00000017295	-	84	91.089	ENSMOCG00000021448	Rab13	99	91.089	Microtus_ochrogaster
ENSMODG00000017295	-	84	88.000	MGP_CAROLIEiJ_G0025227	Rab13	99	88.000	Mus_caroli
ENSMODG00000017295	-	84	87.500	ENSMUSG00000027935	Rab13	99	87.500	Mus_musculus
ENSMODG00000017295	-	84	87.500	MGP_PahariEiJ_G0026671	Rab13	99	87.500	Mus_pahari
ENSMODG00000017295	-	84	90.594	ENSNGAG00000010309	Rab13	99	90.594	Nannospalax_galili
ENSMODG00000017295	-	84	77.500	ENSNBRG00000004124	rab13	98	77.500	Neolamprologus_brichardi
ENSMODG00000017295	-	84	92.574	ENSNLEG00000028944	-	99	92.574	Nomascus_leucogenys
ENSMODG00000017295	-	84	96.020	ENSMEUG00000009667	-	99	96.020	Notamacropus_eugenii
ENSMODG00000017295	-	84	85.644	ENSODEG00000010443	-	99	85.644	Octodon_degus
ENSMODG00000017295	-	53	97.619	ENSODEG00000012634	-	99	97.619	Octodon_degus
ENSMODG00000017295	-	84	78.000	ENSONIG00000006340	rab13	99	78.000	Oreochromis_niloticus
ENSMODG00000017295	-	74	94.382	ENSOCUG00000006286	-	100	94.382	Oryctolagus_cuniculus
ENSMODG00000017295	-	84	77.228	ENSOMEG00000008210	rab13	99	77.228	Oryzias_melastigma
ENSMODG00000017295	-	84	89.109	ENSOGAG00000016969	-	99	89.109	Otolemur_garnettii
ENSMODG00000017295	-	84	92.574	ENSPPAG00000028435	-	99	92.574	Pan_paniscus
ENSMODG00000017295	-	84	89.109	ENSPPRG00000008865	-	99	89.109	Panthera_pardus
ENSMODG00000017295	-	84	92.574	ENSPTRG00000001370	RAB13	99	92.574	Pan_troglodytes
ENSMODG00000017295	-	84	92.574	ENSPANG00000004479	-	99	92.574	Papio_anubis
ENSMODG00000017295	-	84	76.617	ENSPMGG00000007680	rab13	99	76.617	Periophthalmus_magnuspinnatus
ENSMODG00000017295	-	84	96.517	ENSPCIG00000029350	-	99	96.517	Phascolarctos_cinereus
ENSMODG00000017295	-	74	83.523	ENSPLAG00000005832	RAB13	94	83.523	Poecilia_latipinna
ENSMODG00000017295	-	76	81.868	ENSPREG00000017567	rab13	99	76.617	Poecilia_reticulata
ENSMODG00000017295	-	84	92.574	ENSPPYG00000000790	-	99	92.574	Pongo_abelii
ENSMODG00000017295	-	84	92.574	ENSPCOG00000012189	-	99	92.574	Propithecus_coquereli
ENSMODG00000017295	-	84	89.604	ENSPVAG00000011095	-	99	89.604	Pteropus_vampyrus
ENSMODG00000017295	-	74	85.227	ENSPNAG00000004189	rab13	93	85.227	Pygocentrus_nattereri
ENSMODG00000017295	-	84	89.604	ENSRNOG00000016733	Rab13	99	89.604	Rattus_norvegicus
ENSMODG00000017295	-	84	92.574	ENSRBIG00000008552	-	99	92.574	Rhinopithecus_bieti
ENSMODG00000017295	-	84	92.574	ENSRROG00000036885	-	99	92.574	Rhinopithecus_roxellana
ENSMODG00000017295	-	84	92.574	ENSSBOG00000020342	-	99	92.574	Saimiri_boliviensis_boliviensis
ENSMODG00000017295	-	99	91.322	ENSSHAG00000011866	-	99	95.522	Sarcophilus_harrisii
ENSMODG00000017295	-	84	92.079	ENSSSCG00000006564	-	99	92.079	Sus_scrofa
ENSMODG00000017295	-	84	78.818	ENSTRUG00000024177	rab13	99	78.818	Takifugu_rubripes
ENSMODG00000017295	-	84	92.574	ENSTBEG00000012734	-	99	92.574	Tupaia_belangeri
ENSMODG00000017295	-	84	93.069	ENSTTRG00000011183	-	99	93.069	Tursiops_truncatus
ENSMODG00000017295	-	60	82.517	ENSXETG00000020729	rab13	99	78.750	Xenopus_tropicalis
ENSMODG00000017295	-	74	82.386	ENSXCOG00000019533	rab13	94	82.386	Xiphophorus_couchianus