EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSMODG00000017404 (Gene tree)
Gene ID: 100025987
Gene Symbol: YARS
Alias: YRS|YTS|tyrRS
Full Name: tyrosyl-tRNA synthetase
Gene Type: protein_coding
Species: Monodelphis_domestica
Status: putative
Strand: Minus strand
Length: 24436 bases
Position: chr4:426240386-426264821
Accession: 12840
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMODP00000029373	tRNA_bind	PF01588.20	3.4e-33	1	1
ENSMODP00000029373	tRNA-synt_1b	PF00579.25	1.7e-75	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMODT00000030947	YARS-201	2403	-	ENSMODP00000029373	528 (aa)	-	F6VBB2

Gene Model

Click here to download ENSMODG00000017404's gene model file

Pathways

Pathway ID	Pathway Name	Source
mdo00970	Aminoacyl-tRNA biosynthesis	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMODG00000017404's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMODG00000017404	YARS	100	91.667	ENSG00000134684	YARS	100	91.667	Homo_sapiens
ENSMODG00000017404	YARS	100	77.111	ENSAPOG00000020788	yars	100	77.298	Acanthochromis_polyacanthus
ENSMODG00000017404	YARS	100	90.909	ENSAMEG00000007476	YARS	100	90.909	Ailuropoda_melanoleuca
ENSMODG00000017404	YARS	100	78.598	ENSACIG00000017504	yars	100	78.598	Amphilophus_citrinellus
ENSMODG00000017404	YARS	100	76.966	ENSAOCG00000009987	yars	100	77.341	Amphiprion_ocellaris
ENSMODG00000017404	YARS	100	76.966	ENSAPEG00000001273	yars	100	77.341	Amphiprion_percula
ENSMODG00000017404	YARS	100	76.779	ENSATEG00000005301	yars	100	77.154	Anabas_testudineus
ENSMODG00000017404	YARS	98	80.888	ENSAPLG00000005739	YARS	98	80.888	Anas_platyrhynchos
ENSMODG00000017404	YARS	99	83.491	ENSACAG00000003568	YARS	99	83.491	Anolis_carolinensis
ENSMODG00000017404	YARS	100	92.045	ENSANAG00000034533	YARS	100	92.045	Aotus_nancymaae
ENSMODG00000017404	YARS	100	76.326	ENSACLG00000004618	yars	100	76.705	Astatotilapia_calliptera
ENSMODG00000017404	YARS	100	79.811	ENSAMXG00000010993	yars	100	79.811	Astyanax_mexicanus
ENSMODG00000017404	YARS	100	92.424	ENSBTAG00000018065	YARS	100	92.424	Bos_taurus
ENSMODG00000017404	YARS	100	91.288	ENSCJAG00000001037	YARS	100	91.288	Callithrix_jacchus
ENSMODG00000017404	YARS	100	91.477	ENSCAFG00000010481	YARS	94	91.477	Canis_familiaris
ENSMODG00000017404	YARS	100	91.115	ENSCAFG00020025379	YARS	100	91.115	Canis_lupus_dingo
ENSMODG00000017404	YARS	100	92.235	ENSCHIG00000014340	YARS	100	92.235	Capra_hircus
ENSMODG00000017404	YARS	100	90.909	ENSTSYG00000005019	YARS	100	90.909	Carlito_syrichta
ENSMODG00000017404	YARS	90	64.286	ENSCAPG00000008627	YARS	100	65.328	Cavia_aperea
ENSMODG00000017404	YARS	100	90.720	ENSCPOG00000009614	YARS	94	90.720	Cavia_porcellus
ENSMODG00000017404	YARS	100	91.288	ENSCCAG00000036757	YARS	98	91.288	Cebus_capucinus
ENSMODG00000017404	YARS	100	91.667	ENSCATG00000044394	YARS	100	91.667	Cercocebus_atys
ENSMODG00000017404	YARS	100	92.045	ENSCLAG00000008977	YARS	93	92.045	Chinchilla_lanigera
ENSMODG00000017404	YARS	100	91.856	ENSCSAG00000001062	YARS	100	91.856	Chlorocebus_sabaeus
ENSMODG00000017404	YARS	96	81.336	ENSCHOG00000003939	YARS	100	81.139	Choloepus_hoffmanni
ENSMODG00000017404	YARS	100	85.985	ENSCPBG00000010998	YARS	100	85.985	Chrysemys_picta_bellii
ENSMODG00000017404	YARS	99	68.431	ENSCING00000005113	-	99	69.376	Ciona_intestinalis
ENSMODG00000017404	YARS	99	66.793	ENSCSAVG00000003706	-	99	66.603	Ciona_savignyi
ENSMODG00000017404	YARS	100	91.667	ENSCANG00000038285	YARS	100	91.667	Colobus_angolensis_palliatus
ENSMODG00000017404	YARS	100	91.288	ENSCGRG00001010863	Yars	100	86.932	Cricetulus_griseus_chok1gshd
ENSMODG00000017404	YARS	100	91.288	ENSCGRG00000007526	Yars	94	91.288	Cricetulus_griseus_crigri
ENSMODG00000017404	YARS	100	76.749	ENSCSEG00000009643	yars	100	76.938	Cynoglossus_semilaevis
ENSMODG00000017404	YARS	100	78.491	ENSCVAG00000016583	yars	100	78.491	Cyprinodon_variegatus
ENSMODG00000017404	YARS	100	80.718	ENSDARG00000035913	yars	100	90.805	Danio_rerio
ENSMODG00000017404	YARS	100	91.098	ENSDNOG00000000536	YARS	100	91.098	Dasypus_novemcinctus
ENSMODG00000017404	YARS	100	90.152	ENSDORG00000011871	Yars	100	90.152	Dipodomys_ordii
ENSMODG00000017404	YARS	97	67.704	FBgn0027080	TyrRS	97	68.093	Drosophila_melanogaster
ENSMODG00000017404	YARS	86	92.063	ENSETEG00000000215	YARS	87	92.063	Echinops_telfairi
ENSMODG00000017404	YARS	99	66.163	ENSEBUG00000004750	yars	100	66.163	Eptatretus_burgeri
ENSMODG00000017404	YARS	99	91.013	ENSEASG00005011762	YARS	93	90.720	Equus_asinus_asinus
ENSMODG00000017404	YARS	99	90.631	ENSECAG00000010015	YARS	68	90.341	Equus_caballus
ENSMODG00000017404	YARS	87	71.316	ENSEEUG00000005992	-	87	71.316	Erinaceus_europaeus
ENSMODG00000017404	YARS	100	78.598	ENSELUG00000017171	yars	100	78.598	Esox_lucius
ENSMODG00000017404	YARS	100	67.803	ENSFCAG00000000704	YARS	99	93.722	Felis_catus
ENSMODG00000017404	YARS	99	87.140	ENSFALG00000000592	YARS	92	87.165	Ficedula_albicollis
ENSMODG00000017404	YARS	100	91.288	ENSFDAG00000006620	YARS	94	91.288	Fukomys_damarensis
ENSMODG00000017404	YARS	100	77.444	ENSFHEG00000022444	yars	100	77.820	Fundulus_heteroclitus
ENSMODG00000017404	YARS	96	74.263	ENSGMOG00000006555	yars	100	74.263	Gadus_morhua
ENSMODG00000017404	YARS	99	86.398	ENSGALG00000003563	YARS	97	86.398	Gallus_gallus
ENSMODG00000017404	YARS	100	76.648	ENSGACG00000008516	yars	100	77.213	Gasterosteus_aculeatus
ENSMODG00000017404	YARS	100	85.227	ENSGAGG00000024290	YARS	100	85.227	Gopherus_agassizii
ENSMODG00000017404	YARS	100	91.477	ENSGGOG00000014013	YARS	100	91.477	Gorilla_gorilla
ENSMODG00000017404	YARS	100	75.514	ENSHBUG00000018909	yars	100	75.701	Haplochromis_burtoni
ENSMODG00000017404	YARS	100	90.720	ENSHGLG00000013843	YARS	94	90.720	Heterocephalus_glaber_female
ENSMODG00000017404	YARS	100	89.583	ENSHGLG00100002785	-	100	89.583	Heterocephalus_glaber_male
ENSMODG00000017404	YARS	70	88.283	ENSHGLG00100020546	-	99	88.283	Heterocephalus_glaber_male
ENSMODG00000017404	YARS	100	74.074	ENSHCOG00000006672	yars	100	74.677	Hippocampus_comes
ENSMODG00000017404	YARS	99	78.788	ENSIPUG00000021749	yars	99	78.788	Ictalurus_punctatus
ENSMODG00000017404	YARS	100	91.667	ENSSTOG00000012031	YARS	94	91.667	Ictidomys_tridecemlineatus
ENSMODG00000017404	YARS	100	89.583	ENSJJAG00000013281	Yars	93	89.583	Jaculus_jaculus
ENSMODG00000017404	YARS	100	77.256	ENSKMAG00000021752	yars	100	77.444	Kryptolebias_marmoratus
ENSMODG00000017404	YARS	100	76.822	ENSLBEG00000024080	yars	100	77.009	Labrus_bergylta
ENSMODG00000017404	YARS	100	80.114	ENSLACG00000015577	YARS	100	80.114	Latimeria_chalumnae
ENSMODG00000017404	YARS	100	80.871	ENSLOCG00000002165	yars	99	81.025	Lepisosteus_oculatus
ENSMODG00000017404	YARS	100	90.530	ENSLAFG00000003786	YARS	96	90.530	Loxodonta_africana
ENSMODG00000017404	YARS	100	86.742	ENSMFAG00000040933	YARS	100	86.932	Macaca_fascicularis
ENSMODG00000017404	YARS	100	91.856	ENSMMUG00000019746	YARS	100	91.856	Macaca_mulatta
ENSMODG00000017404	YARS	100	85.255	ENSMNEG00000031865	YARS	100	85.255	Macaca_nemestrina
ENSMODG00000017404	YARS	100	91.477	ENSMLEG00000041315	YARS	100	91.477	Mandrillus_leucophaeus
ENSMODG00000017404	YARS	100	77.068	ENSMAMG00000006092	yars	100	77.256	Mastacembelus_armatus
ENSMODG00000017404	YARS	100	75.422	ENSMZEG00005011426	yars	100	75.610	Maylandia_zebra
ENSMODG00000017404	YARS	99	85.687	ENSMGAG00000005063	YARS	99	85.687	Meleagris_gallopavo
ENSMODG00000017404	YARS	97	91.423	ENSMAUG00000021126	Yars	99	91.423	Mesocricetus_auratus
ENSMODG00000017404	YARS	100	92.235	ENSMICG00000011204	YARS	100	92.235	Microcebus_murinus
ENSMODG00000017404	YARS	100	91.098	ENSMOCG00000011342	Yars	94	91.098	Microtus_ochrogaster
ENSMODG00000017404	YARS	100	74.053	ENSMMOG00000021133	yars	100	74.432	Mola_mola
ENSMODG00000017404	YARS	65	78.198	ENSMALG00000003648	yars	94	78.426	Monopterus_albus
ENSMODG00000017404	YARS	100	91.667	MGP_CAROLIEiJ_G0026513	Yars	94	91.667	Mus_caroli
ENSMODG00000017404	YARS	100	92.045	ENSMUSG00000028811	Yars	94	92.045	Mus_musculus
ENSMODG00000017404	YARS	100	91.477	MGP_PahariEiJ_G0028844	Yars	94	91.477	Mus_pahari
ENSMODG00000017404	YARS	100	92.045	MGP_SPRETEiJ_G0027493	Yars	94	92.045	Mus_spretus
ENSMODG00000017404	YARS	100	91.667	ENSMLUG00000000759	YARS	100	91.667	Myotis_lucifugus
ENSMODG00000017404	YARS	98	89.210	ENSNGAG00000001419	Yars	100	90.570	Nannospalax_galili
ENSMODG00000017404	YARS	100	77.652	ENSNBRG00000020413	yars	100	77.652	Neolamprologus_brichardi
ENSMODG00000017404	YARS	100	91.477	ENSNLEG00000002922	YARS	100	91.477	Nomascus_leucogenys
ENSMODG00000017404	YARS	75	96.000	ENSMEUG00000011824	-	75	96.000	Notamacropus_eugenii
ENSMODG00000017404	YARS	100	86.932	ENSOPRG00000003669	YARS	100	86.932	Ochotona_princeps
ENSMODG00000017404	YARS	100	89.962	ENSODEG00000005363	YARS	94	89.962	Octodon_degus
ENSMODG00000017404	YARS	100	76.449	ENSONIG00000015400	yars	100	76.636	Oreochromis_niloticus
ENSMODG00000017404	YARS	93	82.424	ENSOANG00000011779	YARS	99	82.424	Ornithorhynchus_anatinus
ENSMODG00000017404	YARS	100	92.045	ENSOCUG00000010007	YARS	100	92.045	Oryctolagus_cuniculus
ENSMODG00000017404	YARS	98	77.143	ENSORLG00000013982	yars	96	77.143	Oryzias_latipes
ENSMODG00000017404	YARS	100	77.213	ENSORLG00020020750	yars	100	77.589	Oryzias_latipes_hni
ENSMODG00000017404	YARS	100	76.923	ENSORLG00015008963	yars	100	77.486	Oryzias_latipes_hsok
ENSMODG00000017404	YARS	100	77.213	ENSOMEG00000013016	yars	95	86.325	Oryzias_melastigma
ENSMODG00000017404	YARS	100	91.667	ENSOGAG00000007359	YARS	100	91.667	Otolemur_garnettii
ENSMODG00000017404	YARS	100	92.992	ENSOARG00000020897	YARS	93	92.992	Ovis_aries
ENSMODG00000017404	YARS	100	91.856	ENSPPAG00000035791	YARS	98	91.992	Pan_paniscus
ENSMODG00000017404	YARS	100	90.530	ENSPPRG00000023768	YARS	100	90.530	Panthera_pardus
ENSMODG00000017404	YARS	100	90.530	ENSPTIG00000003438	YARS	100	90.530	Panthera_tigris_altaica
ENSMODG00000017404	YARS	100	91.856	ENSPTRG00000000491	YARS	100	91.856	Pan_troglodytes
ENSMODG00000017404	YARS	100	91.667	ENSPANG00000009804	YARS	100	91.667	Papio_anubis
ENSMODG00000017404	YARS	100	80.492	ENSPKIG00000024596	yars	100	80.492	Paramormyrops_kingsleyae
ENSMODG00000017404	YARS	100	73.585	ENSPSIG00000006945	YARS	100	73.585	Pelodiscus_sinensis
ENSMODG00000017404	YARS	100	76.705	ENSPMGG00000022917	yars	100	76.705	Periophthalmus_magnuspinnatus
ENSMODG00000017404	YARS	100	91.098	ENSPEMG00000010746	Yars	94	91.098	Peromyscus_maniculatus_bairdii
ENSMODG00000017404	YARS	100	95.644	ENSPCIG00000022457	YARS	99	95.825	Phascolarctos_cinereus
ENSMODG00000017404	YARS	100	76.128	ENSPFOG00000014808	yars	100	76.692	Poecilia_formosa
ENSMODG00000017404	YARS	100	76.316	ENSPLAG00000020075	yars	100	76.880	Poecilia_latipinna
ENSMODG00000017404	YARS	100	76.128	ENSPMEG00000002803	yars	100	76.692	Poecilia_mexicana
ENSMODG00000017404	YARS	100	76.705	ENSPREG00000018280	yars	100	76.894	Poecilia_reticulata
ENSMODG00000017404	YARS	100	89.642	ENSPPYG00000001585	YARS	100	89.642	Pongo_abelii
ENSMODG00000017404	YARS	81	90.274	ENSPCAG00000011170	YARS	81	90.274	Procavia_capensis
ENSMODG00000017404	YARS	100	91.667	ENSPCOG00000021026	YARS	100	91.667	Propithecus_coquereli
ENSMODG00000017404	YARS	100	90.530	ENSPVAG00000010984	YARS	100	90.530	Pteropus_vampyrus
ENSMODG00000017404	YARS	100	76.515	ENSPNYG00000000860	yars	100	76.894	Pundamilia_nyererei
ENSMODG00000017404	YARS	100	80.340	ENSPNAG00000009622	yars	100	80.340	Pygocentrus_nattereri
ENSMODG00000017404	YARS	100	90.909	ENSRNOG00000007213	Yars	94	90.909	Rattus_norvegicus
ENSMODG00000017404	YARS	55	74.306	ENSRBIG00000044271	-	86	74.306	Rhinopithecus_bieti
ENSMODG00000017404	YARS	100	91.477	ENSRROG00000039913	YARS	100	91.477	Rhinopithecus_roxellana
ENSMODG00000017404	YARS	100	91.667	ENSSBOG00000030205	YARS	100	91.797	Saimiri_boliviensis_boliviensis
ENSMODG00000017404	YARS	100	93.371	ENSSHAG00000011851	YARS	100	93.371	Sarcophilus_harrisii
ENSMODG00000017404	YARS	100	81.061	ENSSFOG00015007179	yars	100	81.061	Scleropages_formosus
ENSMODG00000017404	YARS	100	74.151	ENSSMAG00000020736	yars	100	74.151	Scophthalmus_maximus
ENSMODG00000017404	YARS	100	78.113	ENSSDUG00000001782	yars	100	78.302	Seriola_dumerili
ENSMODG00000017404	YARS	100	78.788	ENSSLDG00000008268	yars	100	78.788	Seriola_lalandi_dorsalis
ENSMODG00000017404	YARS	86	79.121	ENSSARG00000012227	-	86	79.121	Sorex_araneus
ENSMODG00000017404	YARS	100	86.742	ENSSPUG00000000333	YARS	100	86.742	Sphenodon_punctatus
ENSMODG00000017404	YARS	100	75.655	ENSSPAG00000020632	yars	100	72.830	Stegastes_partitus
ENSMODG00000017404	YARS	100	91.477	ENSSSCG00000030369	YARS	100	91.477	Sus_scrofa
ENSMODG00000017404	YARS	99	86.782	ENSTGUG00000001342	YARS	99	86.782	Taeniopygia_guttata
ENSMODG00000017404	YARS	99	78.857	ENSTRUG00000014099	yars	99	78.857	Takifugu_rubripes
ENSMODG00000017404	YARS	99	77.989	ENSTNIG00000009237	yars	99	77.989	Tetraodon_nigroviridis
ENSMODG00000017404	YARS	96	81.139	ENSTBEG00000014374	YARS	100	81.139	Tupaia_belangeri
ENSMODG00000017404	YARS	100	90.152	ENSTTRG00000014987	YARS	100	90.152	Tursiops_truncatus
ENSMODG00000017404	YARS	100	87.879	ENSUAMG00000000392	YARS	100	84.659	Ursus_americanus
ENSMODG00000017404	YARS	100	81.273	ENSUMAG00000008312	YARS	93	81.273	Ursus_maritimus
ENSMODG00000017404	YARS	100	78.828	ENSVPAG00000010958	YARS	100	78.828	Vicugna_pacos
ENSMODG00000017404	YARS	100	91.477	ENSVVUG00000015468	YARS	99	91.585	Vulpes_vulpes
ENSMODG00000017404	YARS	100	79.167	ENSXETG00000027865	yars	100	79.167	Xenopus_tropicalis
ENSMODG00000017404	YARS	94	76.494	ENSXMAG00000016348	yars	81	77.092	Xiphophorus_maculatus