EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMODG00000017729 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Monodelphis_domestica
Status: putative
Strand: Minus strand
Length: 17613 bases
Position: chr4:421634209-421651821
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMODP00000022109	SF3a60_bindingd	PF12108.8	1e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMODT00000022497	-	1804	-	ENSMODP00000022109	507 (aa)	-	F7ELE8

Gene Model

Click here to download ENSMODG00000017729's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMODG00000017729's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMODG00000017729	-	100	73.308	ENSMODG00000024045	-	100	74.175

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMODG00000017729	-	100	77.476	ENSG00000183431	SF3A3	100	78.447	Homo_sapiens
ENSMODG00000017729	-	100	70.656	ENSAPOG00000015608	sf3a3	100	71.650	Acanthochromis_polyacanthus
ENSMODG00000017729	-	100	77.670	ENSAMEG00000001262	SF3A3	100	78.641	Ailuropoda_melanoleuca
ENSMODG00000017729	-	91	71.762	ENSACIG00000009061	sf3a3	90	72.863	Amphilophus_citrinellus
ENSMODG00000017729	-	100	71.236	ENSAOCG00000013954	sf3a3	100	72.233	Amphiprion_ocellaris
ENSMODG00000017729	-	100	71.236	ENSAPEG00000007297	sf3a3	100	72.233	Amphiprion_percula
ENSMODG00000017729	-	100	70.270	ENSATEG00000008754	sf3a3	100	71.262	Anabas_testudineus
ENSMODG00000017729	-	94	74.741	ENSAPLG00000014900	SF3A3	100	75.776	Anas_platyrhynchos
ENSMODG00000017729	-	100	75.629	ENSACAG00000017058	SF3A3	100	76.311	Anolis_carolinensis
ENSMODG00000017729	-	99	73.438	ENSANAG00000014878	SF3A3	100	74.414	Aotus_nancymaae
ENSMODG00000017729	-	100	61.736	ENSANAG00000036903	-	100	62.130	Aotus_nancymaae
ENSMODG00000017729	-	100	70.849	ENSACLG00000017977	sf3a3	100	71.845	Astatotilapia_calliptera
ENSMODG00000017729	-	100	71.954	ENSAMXG00000016855	sf3a3	87	72.427	Astyanax_mexicanus
ENSMODG00000017729	-	100	77.476	ENSBTAG00000007299	SF3A3	100	78.447	Bos_taurus
ENSMODG00000017729	-	100	39.038	WBGene00011758	T13H5.4	100	39.458	Caenorhabditis_elegans
ENSMODG00000017729	-	100	77.476	ENSCJAG00000002176	SF3A3	100	78.447	Callithrix_jacchus
ENSMODG00000017729	-	100	77.670	ENSCAFG00000003222	-	100	78.641	Canis_familiaris
ENSMODG00000017729	-	100	77.670	ENSCAFG00000000683	-	100	78.641	Canis_familiaris
ENSMODG00000017729	-	100	77.670	ENSCAFG00020006186	SF3A3	100	78.641	Canis_lupus_dingo
ENSMODG00000017729	-	100	77.476	ENSCHIG00000020638	SF3A3	100	78.447	Capra_hircus
ENSMODG00000017729	-	100	73.819	ENSTSYG00000008417	SF3A3	100	74.803	Carlito_syrichta
ENSMODG00000017729	-	52	61.818	ENSCAPG00000003466	SF3A3	94	47.420	Cavia_aperea
ENSMODG00000017729	-	100	77.950	ENSCPOG00000008660	SF3A3	100	78.641	Cavia_porcellus
ENSMODG00000017729	-	69	81.579	ENSCCAG00000034048	-	100	56.809	Cebus_capucinus
ENSMODG00000017729	-	100	77.476	ENSCCAG00000033732	SF3A3	100	78.447	Cebus_capucinus
ENSMODG00000017729	-	100	63.905	ENSCATG00000043537	-	100	64.694	Cercocebus_atys
ENSMODG00000017729	-	91	64.957	ENSCATG00000041660	-	97	65.171	Cercocebus_atys
ENSMODG00000017729	-	100	77.476	ENSCATG00000043496	SF3A3	100	78.447	Cercocebus_atys
ENSMODG00000017729	-	100	77.756	ENSCLAG00000010838	SF3A3	100	78.447	Chinchilla_lanigera
ENSMODG00000017729	-	91	79.229	ENSCSAG00000001120	SF3A3	96	80.300	Chlorocebus_sabaeus
ENSMODG00000017729	-	80	69.668	ENSCHOG00000006849	SF3A3	80	69.668	Choloepus_hoffmanni
ENSMODG00000017729	-	100	68.544	ENSCPBG00000018291	-	100	69.515	Chrysemys_picta_bellii
ENSMODG00000017729	-	62	76.282	ENSCPBG00000007472	-	79	76.282	Chrysemys_picta_bellii
ENSMODG00000017729	-	100	52.326	ENSCING00000002730	-	100	52.519	Ciona_intestinalis
ENSMODG00000017729	-	100	52.233	ENSCSAVG00000005063	-	100	52.427	Ciona_savignyi
ENSMODG00000017729	-	100	60.158	ENSCANG00000035535	-	100	61.144	Colobus_angolensis_palliatus
ENSMODG00000017729	-	100	77.476	ENSCANG00000042083	SF3A3	100	78.447	Colobus_angolensis_palliatus
ENSMODG00000017729	-	100	77.756	ENSCGRG00001011320	Sf3a3	100	78.447	Cricetulus_griseus_chok1gshd
ENSMODG00000017729	-	100	77.756	ENSCGRG00000012156	Sf3a3	100	78.447	Cricetulus_griseus_crigri
ENSMODG00000017729	-	100	69.691	ENSCSEG00000010401	sf3a3	100	70.680	Cynoglossus_semilaevis
ENSMODG00000017729	-	94	67.490	ENSCVAG00000010239	sf3a3	95	68.530	Cyprinodon_variegatus
ENSMODG00000017729	-	100	70.463	ENSDARG00000100114	sf3a3	100	71.262	Danio_rerio
ENSMODG00000017729	-	91	79.060	ENSDNOG00000046628	SF3A3	99	80.128	Dasypus_novemcinctus
ENSMODG00000017729	-	100	77.756	ENSDORG00000008798	Sf3a3	100	78.447	Dipodomys_ordii
ENSMODG00000017729	-	100	50.289	FBgn0014366	noi	100	50.289	Drosophila_melanogaster
ENSMODG00000017729	-	100	63.532	ENSEBUG00000015411	sf3a3	92	64.217	Eptatretus_burgeri
ENSMODG00000017729	-	100	77.670	ENSEASG00005012906	SF3A3	100	78.641	Equus_asinus_asinus
ENSMODG00000017729	-	100	77.670	ENSECAG00000017333	SF3A3	100	78.641	Equus_caballus
ENSMODG00000017729	-	100	68.533	ENSELUG00000010024	sf3a3	100	69.515	Esox_lucius
ENSMODG00000017729	-	100	77.670	ENSFCAG00000027772	SF3A3	100	78.641	Felis_catus
ENSMODG00000017729	-	100	75.534	ENSFALG00000001003	SF3A3	100	76.505	Ficedula_albicollis
ENSMODG00000017729	-	100	77.950	ENSFDAG00000020908	SF3A3	100	78.641	Fukomys_damarensis
ENSMODG00000017729	-	100	69.498	ENSFHEG00000019107	sf3a3	100	70.485	Fundulus_heteroclitus
ENSMODG00000017729	-	100	68.738	ENSGMOG00000015540	sf3a3	100	69.709	Gadus_morhua
ENSMODG00000017729	-	100	75.340	ENSGALG00000001540	SF3A3	100	76.311	Gallus_gallus
ENSMODG00000017729	-	100	69.498	ENSGAFG00000002320	sf3a3	100	70.485	Gambusia_affinis
ENSMODG00000017729	-	100	70.849	ENSGACG00000007842	sf3a3	100	71.845	Gasterosteus_aculeatus
ENSMODG00000017729	-	100	76.699	ENSGAGG00000014980	SF3A3	100	77.670	Gopherus_agassizii
ENSMODG00000017729	-	100	67.451	ENSGGOG00000022611	-	100	67.451	Gorilla_gorilla
ENSMODG00000017729	-	100	77.476	ENSGGOG00000013928	SF3A3	100	78.447	Gorilla_gorilla
ENSMODG00000017729	-	100	70.849	ENSHBUG00000018158	sf3a3	100	71.845	Haplochromis_burtoni
ENSMODG00000017729	-	100	77.756	ENSHGLG00000012502	SF3A3	100	78.447	Heterocephalus_glaber_female
ENSMODG00000017729	-	100	77.756	ENSHGLG00100010546	SF3A3	100	78.447	Heterocephalus_glaber_male
ENSMODG00000017729	-	100	68.533	ENSHCOG00000015109	sf3a3	100	69.515	Hippocampus_comes
ENSMODG00000017729	-	100	70.463	ENSIPUG00000011603	sf3a3	100	71.262	Ictalurus_punctatus
ENSMODG00000017729	-	100	77.950	ENSSTOG00000001691	SF3A3	100	78.641	Ictidomys_tridecemlineatus
ENSMODG00000017729	-	100	77.756	ENSJJAG00000012404	Sf3a3	100	78.447	Jaculus_jaculus
ENSMODG00000017729	-	100	69.498	ENSKMAG00000007632	sf3a3	100	70.485	Kryptolebias_marmoratus
ENSMODG00000017729	-	100	63.198	ENSLBEG00000000816	sf3a3	100	64.147	Labrus_bergylta
ENSMODG00000017729	-	100	72.780	ENSLOCG00000003273	sf3a3	100	73.786	Lepisosteus_oculatus
ENSMODG00000017729	-	100	65.377	ENSLAFG00000008094	SF3A3	100	66.019	Loxodonta_africana
ENSMODG00000017729	-	91	66.885	ENSMFAG00000036706	-	97	66.885	Macaca_fascicularis
ENSMODG00000017729	-	100	77.476	ENSMFAG00000043047	SF3A3	100	78.447	Macaca_fascicularis
ENSMODG00000017729	-	100	77.476	ENSMMUG00000023199	SF3A3	100	78.447	Macaca_mulatta
ENSMODG00000017729	-	100	63.583	ENSMMUG00000038820	-	100	63.583	Macaca_mulatta
ENSMODG00000017729	-	100	77.476	ENSMNEG00000044291	SF3A3	100	78.447	Macaca_nemestrina
ENSMODG00000017729	-	91	61.028	ENSMNEG00000028686	-	97	61.028	Macaca_nemestrina
ENSMODG00000017729	-	100	65.049	ENSMLEG00000036714	-	100	65.049	Mandrillus_leucophaeus
ENSMODG00000017729	-	100	77.476	ENSMLEG00000030641	SF3A3	100	78.447	Mandrillus_leucophaeus
ENSMODG00000017729	-	82	77.219	ENSMLEG00000028631	-	100	63.511	Mandrillus_leucophaeus
ENSMODG00000017729	-	100	70.849	ENSMAMG00000001942	sf3a3	100	71.845	Mastacembelus_armatus
ENSMODG00000017729	-	100	70.849	ENSMZEG00005016987	sf3a3	100	71.845	Maylandia_zebra
ENSMODG00000017729	-	100	70.213	ENSMGAG00000002875	SF3A3	100	71.180	Meleagris_gallopavo
ENSMODG00000017729	-	100	73.981	ENSMICG00000001485	-	100	73.981	Microcebus_murinus
ENSMODG00000017729	-	100	74.951	ENSMICG00000043548	-	100	74.951	Microcebus_murinus
ENSMODG00000017729	-	91	77.302	ENSMICG00000026541	-	99	78.373	Microcebus_murinus
ENSMODG00000017729	-	95	71.984	ENSMOCG00000014565	-	97	71.984	Microtus_ochrogaster
ENSMODG00000017729	-	100	74.081	ENSMOCG00000019939	-	100	74.757	Microtus_ochrogaster
ENSMODG00000017729	-	100	70.849	ENSMMOG00000014307	sf3a3	100	71.845	Mola_mola
ENSMODG00000017729	-	100	70.270	ENSMALG00000004836	sf3a3	100	71.262	Monopterus_albus
ENSMODG00000017729	-	100	77.756	MGP_CAROLIEiJ_G0026449	Sf3a3	100	78.447	Mus_caroli
ENSMODG00000017729	-	100	77.756	ENSMUSG00000028902	Sf3a3	100	78.447	Mus_musculus
ENSMODG00000017729	-	100	72.147	MGP_PahariEiJ_G0028780	Sf3a3	100	72.816	Mus_pahari
ENSMODG00000017729	-	100	77.756	MGP_SPRETEiJ_G0027428	Sf3a3	100	78.447	Mus_spretus
ENSMODG00000017729	-	100	77.282	ENSMLUG00000000991	SF3A3	100	78.252	Myotis_lucifugus
ENSMODG00000017729	-	100	71.760	ENSNGAG00000018032	Sf3a3	100	72.427	Nannospalax_galili
ENSMODG00000017729	-	100	68.738	ENSNLEG00000011720	SF3A3	100	69.709	Nomascus_leucogenys
ENSMODG00000017729	-	100	77.756	ENSOPRG00000012785	SF3A3	100	78.447	Ochotona_princeps
ENSMODG00000017729	-	100	74.460	ENSODEG00000018393	-	100	74.460	Octodon_degus
ENSMODG00000017729	-	100	76.686	ENSODEG00000006854	-	100	77.476	Octodon_degus
ENSMODG00000017729	-	100	72.727	ENSODEG00000007470	-	100	73.398	Octodon_degus
ENSMODG00000017729	-	100	74.951	ENSODEG00000000937	-	100	75.591	Octodon_degus
ENSMODG00000017729	-	87	68.363	ENSONIG00000010296	sf3a3	100	69.488	Oreochromis_niloticus
ENSMODG00000017729	-	94	76.398	ENSOANG00000002473	SF3A3	100	77.433	Ornithorhynchus_anatinus
ENSMODG00000017729	-	100	77.756	ENSOCUG00000005407	SF3A3	100	78.447	Oryctolagus_cuniculus
ENSMODG00000017729	-	100	69.691	ENSORLG00000008175	sf3a3	100	70.680	Oryzias_latipes
ENSMODG00000017729	-	100	69.498	ENSORLG00020013708	sf3a3	100	70.485	Oryzias_latipes_hni
ENSMODG00000017729	-	100	69.498	ENSORLG00015004104	sf3a3	100	70.485	Oryzias_latipes_hsok
ENSMODG00000017729	-	100	69.691	ENSOMEG00000020177	sf3a3	100	70.680	Oryzias_melastigma
ENSMODG00000017729	-	100	77.476	ENSOARG00000019950	SF3A3	100	78.447	Ovis_aries
ENSMODG00000017729	-	100	77.476	ENSPPAG00000034066	SF3A3	100	78.447	Pan_paniscus
ENSMODG00000017729	-	100	67.653	ENSPPAG00000039955	-	100	66.863	Pan_paniscus
ENSMODG00000017729	-	100	77.670	ENSPPRG00000001258	SF3A3	100	78.641	Panthera_pardus
ENSMODG00000017729	-	100	77.670	ENSPTIG00000007515	SF3A3	100	78.641	Panthera_tigris_altaica
ENSMODG00000017729	-	80	86.982	ENSPTRG00000046013	-	90	86.982	Pan_troglodytes
ENSMODG00000017729	-	100	77.476	ENSPTRG00000000559	SF3A3	100	78.447	Pan_troglodytes
ENSMODG00000017729	-	100	68.155	ENSPANG00000029393	-	100	68.155	Papio_anubis
ENSMODG00000017729	-	100	77.476	ENSPANG00000021859	SF3A3	100	78.447	Papio_anubis
ENSMODG00000017729	-	85	77.515	ENSPANG00000031214	-	100	63.725	Papio_anubis
ENSMODG00000017729	-	100	71.622	ENSPKIG00000004719	sf3a3	100	72.621	Paramormyrops_kingsleyae
ENSMODG00000017729	-	100	75.242	ENSPSIG00000004273	SF3A3	100	75.242	Pelodiscus_sinensis
ENSMODG00000017729	-	93	69.691	ENSPMGG00000003610	sf3a3	97	70.539	Periophthalmus_magnuspinnatus
ENSMODG00000017729	-	100	77.756	ENSPEMG00000020805	Sf3a3	100	78.447	Peromyscus_maniculatus_bairdii
ENSMODG00000017729	-	53	80.000	ENSPMAG00000001044	sf3a3	98	80.000	Petromyzon_marinus
ENSMODG00000017729	-	100	78.447	ENSPCIG00000025719	SF3A3	100	79.417	Phascolarctos_cinereus
ENSMODG00000017729	-	100	69.498	ENSPFOG00000005284	sf3a3	100	70.485	Poecilia_formosa
ENSMODG00000017729	-	91	70.638	ENSPLAG00000003979	sf3a3	85	71.734	Poecilia_latipinna
ENSMODG00000017729	-	67	82.006	ENSPMEG00000021132	sf3a3	75	82.006	Poecilia_mexicana
ENSMODG00000017729	-	100	69.498	ENSPREG00000013802	sf3a3	100	70.485	Poecilia_reticulata
ENSMODG00000017729	-	100	74.757	ENSPPYG00000001519	SF3A3	100	75.728	Pongo_abelii
ENSMODG00000017729	-	100	71.456	ENSPCAG00000010734	SF3A3	100	72.427	Procavia_capensis
ENSMODG00000017729	-	100	62.355	ENSPCOG00000017131	-	100	63.689	Propithecus_coquereli
ENSMODG00000017729	-	100	65.830	ENSPCOG00000020389	-	100	66.795	Propithecus_coquereli
ENSMODG00000017729	-	100	66.408	ENSPVAG00000010158	SF3A3	100	66.408	Pteropus_vampyrus
ENSMODG00000017729	-	100	70.849	ENSPNYG00000000786	sf3a3	100	71.845	Pundamilia_nyererei
ENSMODG00000017729	-	100	71.429	ENSPNAG00000010298	sf3a3	100	72.233	Pygocentrus_nattereri
ENSMODG00000017729	-	100	77.756	ENSRNOG00000007629	Sf3a3	99	80.128	Rattus_norvegicus
ENSMODG00000017729	-	100	53.592	ENSRBIG00000043833	-	100	54.563	Rhinopithecus_bieti
ENSMODG00000017729	-	100	57.451	ENSRBIG00000041123	-	100	57.791	Rhinopithecus_bieti
ENSMODG00000017729	-	100	77.476	ENSRBIG00000043567	SF3A3	100	78.447	Rhinopithecus_bieti
ENSMODG00000017729	-	91	64.286	ENSRROG00000032346	-	97	64.502	Rhinopithecus_roxellana
ENSMODG00000017729	-	100	77.476	ENSRROG00000033888	SF3A3	100	78.447	Rhinopithecus_roxellana
ENSMODG00000017729	-	89	98.020	ENSSBOG00000032688	SF3A3	100	98.020	Saimiri_boliviensis_boliviensis
ENSMODG00000017729	-	76	80.259	ENSSBOG00000026932	-	100	60.583	Saimiri_boliviensis_boliviensis
ENSMODG00000017729	-	91	76.231	ENSSHAG00000014530	SF3A3	100	77.302	Sarcophilus_harrisii
ENSMODG00000017729	-	100	71.622	ENSSFOG00015005975	sf3a3	100	72.621	Scleropages_formosus
ENSMODG00000017729	-	100	70.656	ENSSMAG00000020213	sf3a3	100	71.650	Scophthalmus_maximus
ENSMODG00000017729	-	100	67.375	ENSSDUG00000011590	sf3a3	100	68.350	Seriola_dumerili
ENSMODG00000017729	-	100	71.236	ENSSLDG00000020635	sf3a3	100	72.233	Seriola_lalandi_dorsalis
ENSMODG00000017729	-	100	75.435	ENSSPUG00000004010	SF3A3	100	76.117	Sphenodon_punctatus
ENSMODG00000017729	-	100	70.849	ENSSPAG00000018653	sf3a3	100	71.845	Stegastes_partitus
ENSMODG00000017729	-	100	77.670	ENSSSCG00000003643	SF3A3	100	78.641	Sus_scrofa
ENSMODG00000017729	-	87	72.383	ENSTGUG00000001466	SF3A3	99	73.497	Taeniopygia_guttata
ENSMODG00000017729	-	100	69.884	ENSTRUG00000009089	sf3a3	100	70.874	Takifugu_rubripes
ENSMODG00000017729	-	100	69.231	ENSTNIG00000009800	sf3a3	100	70.213	Tetraodon_nigroviridis
ENSMODG00000017729	-	75	89.645	ENSTBEG00000007614	SF3A3	100	66.794	Tupaia_belangeri
ENSMODG00000017729	-	100	77.821	ENSTTRG00000013519	SF3A3	100	78.794	Tursiops_truncatus
ENSMODG00000017729	-	100	77.670	ENSUAMG00000006134	SF3A3	100	78.641	Ursus_americanus
ENSMODG00000017729	-	100	77.670	ENSUMAG00000021250	SF3A3	100	78.641	Ursus_maritimus
ENSMODG00000017729	-	65	98.955	ENSVPAG00000004778	SF3A3	72	98.955	Vicugna_pacos
ENSMODG00000017729	-	100	78.501	ENSVVUG00000022908	SF3A3	100	79.487	Vulpes_vulpes
ENSMODG00000017729	-	100	72.640	ENSXETG00000022923	sf3a3	100	73.398	Xenopus_tropicalis
ENSMODG00000017729	-	100	69.498	ENSXMAG00000017165	sf3a3	100	70.485	Xiphophorus_maculatus