EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMODG00000018004 (Gene tree)
Gene ID: 554187
Gene Symbol: APOBEC1
Alias: APOBEC-1
Full Name: Monodelphis domestica apolipoprotein B mRNA editing enzyme catalytic subunit 1 (APOBEC1)%2C mRNA.
Gene Type: protein_coding
Species: Monodelphis_domestica
Status: putative
Strand: Minus strand
Length: 9714 bases
Position: chr8:105213203-105222916
Accession: NM_001032982
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMODP00000022453	APOBEC_N	PF08210.11	2.1e-30	1	1
ENSMODP00000022453	APOBEC_C	PF05240.14	5.9e-25	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMODT00000022843	-	776	-	ENSMODP00000022453	235 (aa)	-	Q9TUI7

Gene Model

Click here to download ENSMODG00000018004's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMODG00000018004's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMODG00000018004	APOBEC1	100	66.525	ENSG00000111701	APOBEC1	100	66.525	Homo_sapiens
ENSMODG00000018004	APOBEC1	98	67.241	ENSAMEG00000007098	APOBEC1	98	67.241	Ailuropoda_melanoleuca
ENSMODG00000018004	APOBEC1	72	40.237	ENSACAG00000028578	-	93	40.237	Anolis_carolinensis
ENSMODG00000018004	APOBEC1	100	67.797	ENSANAG00000027743	APOBEC1	95	67.797	Aotus_nancymaae
ENSMODG00000018004	APOBEC1	100	63.559	ENSBTAG00000014683	APOBEC1	100	63.559	Bos_taurus
ENSMODG00000018004	APOBEC1	94	68.326	ENSCJAG00000005398	APOBEC1	100	68.326	Callithrix_jacchus
ENSMODG00000018004	APOBEC1	100	67.373	ENSCAFG00000013901	APOBEC1	100	67.373	Canis_familiaris
ENSMODG00000018004	APOBEC1	96	65.487	ENSCAFG00020003511	APOBEC1	95	65.487	Canis_lupus_dingo
ENSMODG00000018004	APOBEC1	98	62.931	ENSCHIG00000011898	APOBEC1	96	62.931	Capra_hircus
ENSMODG00000018004	APOBEC1	60	68.794	ENSTSYG00000029141	APOBEC1	100	68.794	Carlito_syrichta
ENSMODG00000018004	APOBEC1	91	59.813	ENSCAPG00000015882	-	99	59.813	Cavia_aperea
ENSMODG00000018004	APOBEC1	99	59.574	ENSCPOG00000033068	APOBEC1	99	59.574	Cavia_porcellus
ENSMODG00000018004	APOBEC1	100	67.797	ENSCCAG00000022258	APOBEC1	100	67.797	Cebus_capucinus
ENSMODG00000018004	APOBEC1	100	67.797	ENSCATG00000021613	APOBEC1	95	67.797	Cercocebus_atys
ENSMODG00000018004	APOBEC1	97	60.699	ENSCLAG00000014645	APOBEC1	99	60.699	Chinchilla_lanigera
ENSMODG00000018004	APOBEC1	81	66.842	ENSCSAG00000009817	APOBEC1	99	66.842	Chlorocebus_sabaeus
ENSMODG00000018004	APOBEC1	86	43.137	ENSCPBG00000014327	-	80	43.350	Chrysemys_picta_bellii
ENSMODG00000018004	APOBEC1	80	46.875	ENSCPBG00000014328	-	84	46.875	Chrysemys_picta_bellii
ENSMODG00000018004	APOBEC1	85	50.000	ENSCPBG00000014329	-	55	50.000	Chrysemys_picta_bellii
ENSMODG00000018004	APOBEC1	78	47.594	ENSCPBG00000014331	-	77	47.594	Chrysemys_picta_bellii
ENSMODG00000018004	APOBEC1	78	49.198	ENSCPBG00000014335	-	76	49.198	Chrysemys_picta_bellii
ENSMODG00000018004	APOBEC1	75	45.304	ENSCPBG00000017398	-	77	45.304	Chrysemys_picta_bellii
ENSMODG00000018004	APOBEC1	97	68.696	ENSCANG00000038359	APOBEC1	100	68.696	Colobus_angolensis_palliatus
ENSMODG00000018004	APOBEC1	97	63.755	ENSCGRG00001011130	Apobec1	100	63.755	Cricetulus_griseus_chok1gshd
ENSMODG00000018004	APOBEC1	97	63.755	ENSCGRG00000008644	Apobec1	100	63.755	Cricetulus_griseus_crigri
ENSMODG00000018004	APOBEC1	100	66.102	ENSDNOG00000010926	APOBEC1	100	66.102	Dasypus_novemcinctus
ENSMODG00000018004	APOBEC1	90	58.685	ENSDORG00000023717	Apobec1	100	58.685	Dipodomys_ordii
ENSMODG00000018004	APOBEC1	99	64.255	ENSETEG00000004867	APOBEC1	99	64.255	Echinops_telfairi
ENSMODG00000018004	APOBEC1	98	68.103	ENSEASG00005015951	APOBEC1	97	68.103	Equus_asinus_asinus
ENSMODG00000018004	APOBEC1	81	65.789	ENSECAG00000017163	APOBEC1	99	65.789	Equus_caballus
ENSMODG00000018004	APOBEC1	92	58.716	ENSEEUG00000009112	-	97	58.716	Erinaceus_europaeus
ENSMODG00000018004	APOBEC1	87	48.293	ENSEEUG00000007530	-	98	48.293	Erinaceus_europaeus
ENSMODG00000018004	APOBEC1	100	68.644	ENSFCAG00000009350	APOBEC1	100	68.644	Felis_catus
ENSMODG00000018004	APOBEC1	60	46.099	ENSFALG00000007257	-	70	46.099	Ficedula_albicollis
ENSMODG00000018004	APOBEC1	88	52.657	ENSFDAG00000018470	APOBEC1	99	52.657	Fukomys_damarensis
ENSMODG00000018004	APOBEC1	72	46.784	ENSGAGG00000006624	-	62	46.784	Gopherus_agassizii
ENSMODG00000018004	APOBEC1	68	51.852	ENSGAGG00000004947	-	80	51.852	Gopherus_agassizii
ENSMODG00000018004	APOBEC1	83	41.089	ENSGAGG00000021745	-	66	42.553	Gopherus_agassizii
ENSMODG00000018004	APOBEC1	85	50.000	ENSGAGG00000011837	-	87	50.888	Gopherus_agassizii
ENSMODG00000018004	APOBEC1	83	44.670	ENSGAGG00000021744	-	77	44.670	Gopherus_agassizii
ENSMODG00000018004	APOBEC1	99	58.298	ENSHGLG00000001495	APOBEC1	99	58.298	Heterocephalus_glaber_female
ENSMODG00000018004	APOBEC1	99	57.447	ENSHGLG00100002187	APOBEC1	99	57.447	Heterocephalus_glaber_male
ENSMODG00000018004	APOBEC1	91	53.023	ENSSTOG00000021971	APOBEC1	100	71.429	Ictidomys_tridecemlineatus
ENSMODG00000018004	APOBEC1	97	63.319	ENSJJAG00000022108	Apobec1	100	63.319	Jaculus_jaculus
ENSMODG00000018004	APOBEC1	94	67.265	ENSLAFG00000030837	APOBEC1	100	67.265	Loxodonta_africana
ENSMODG00000018004	APOBEC1	100	67.797	ENSMFAG00000000277	APOBEC1	100	67.797	Macaca_fascicularis
ENSMODG00000018004	APOBEC1	100	67.373	ENSMNEG00000029670	APOBEC1	100	67.373	Macaca_nemestrina
ENSMODG00000018004	APOBEC1	100	67.797	ENSMLEG00000036301	APOBEC1	100	67.797	Mandrillus_leucophaeus
ENSMODG00000018004	APOBEC1	91	65.278	ENSMAUG00000022167	Apobec1	97	65.278	Mesocricetus_auratus
ENSMODG00000018004	APOBEC1	100	66.102	ENSMICG00000043645	APOBEC1	100	66.102	Microcebus_murinus
ENSMODG00000018004	APOBEC1	97	64.912	ENSMUSG00000040613	Apobec1	99	66.071	Mus_musculus
ENSMODG00000018004	APOBEC1	97	64.474	MGP_PahariEiJ_G0022580	-	99	66.071	Mus_pahari
ENSMODG00000018004	APOBEC1	97	64.912	MGP_SPRETEiJ_G0029857	Apobec1	99	66.071	Mus_spretus
ENSMODG00000018004	APOBEC1	100	63.559	ENSMPUG00000017532	APOBEC1	100	63.559	Mustela_putorius_furo
ENSMODG00000018004	APOBEC1	97	62.445	ENSNGAG00000022607	Apobec1	100	62.445	Nannospalax_galili
ENSMODG00000018004	APOBEC1	100	67.373	ENSNLEG00000005342	APOBEC1	100	67.373	Nomascus_leucogenys
ENSMODG00000018004	APOBEC1	100	80.085	ENSMEUG00000013406	APOBEC1	100	80.085	Notamacropus_eugenii
ENSMODG00000018004	APOBEC1	77	56.111	ENSOPRG00000009508	-	100	56.111	Ochotona_princeps
ENSMODG00000018004	APOBEC1	100	63.559	ENSOCUG00000025736	APOBEC1	88	63.559	Oryctolagus_cuniculus
ENSMODG00000018004	APOBEC1	99	67.382	ENSOGAG00000026415	APOBEC1	99	67.382	Otolemur_garnettii
ENSMODG00000018004	APOBEC1	100	63.136	ENSOARG00000002072	APOBEC1	99	63.136	Ovis_aries
ENSMODG00000018004	APOBEC1	99	63.090	ENSPPAG00000027657	APOBEC1	99	63.090	Pan_paniscus
ENSMODG00000018004	APOBEC1	100	68.220	ENSPPRG00000012182	APOBEC1	100	68.220	Panthera_pardus
ENSMODG00000018004	APOBEC1	100	68.220	ENSPTIG00000020280	APOBEC1	100	68.220	Panthera_tigris_altaica
ENSMODG00000018004	APOBEC1	100	67.373	ENSPTRG00000004614	APOBEC1	100	67.373	Pan_troglodytes
ENSMODG00000018004	APOBEC1	100	67.797	ENSPANG00000021027	APOBEC1	100	67.797	Papio_anubis
ENSMODG00000018004	APOBEC1	78	43.011	ENSPSIG00000012568	-	81	43.011	Pelodiscus_sinensis
ENSMODG00000018004	APOBEC1	54	48.333	ENSPSIG00000012791	-	71	48.333	Pelodiscus_sinensis
ENSMODG00000018004	APOBEC1	97	63.755	ENSPEMG00000023841	Apobec1	100	63.755	Peromyscus_maniculatus_bairdii
ENSMODG00000018004	APOBEC1	100	83.898	ENSPCIG00000023973	APOBEC1	100	83.898	Phascolarctos_cinereus
ENSMODG00000018004	APOBEC1	100	66.949	ENSPPYG00000004228	APOBEC1	95	66.949	Pongo_abelii
ENSMODG00000018004	APOBEC1	79	66.310	ENSPCAG00000008733	APOBEC1	100	66.310	Procavia_capensis
ENSMODG00000018004	APOBEC1	94	65.766	ENSPCOG00000013957	APOBEC1	98	65.766	Propithecus_coquereli
ENSMODG00000018004	APOBEC1	100	54.237	ENSPVAG00000010709	APOBEC1	100	54.237	Pteropus_vampyrus
ENSMODG00000018004	APOBEC1	97	62.719	ENSRNOG00000015411	Apobec1	99	62.719	Rattus_norvegicus
ENSMODG00000018004	APOBEC1	100	67.797	ENSRBIG00000031161	APOBEC1	100	67.797	Rhinopithecus_bieti
ENSMODG00000018004	APOBEC1	100	67.797	ENSRROG00000033576	APOBEC1	100	67.797	Rhinopithecus_roxellana
ENSMODG00000018004	APOBEC1	73	70.520	ENSSBOG00000030587	APOBEC1	98	70.520	Saimiri_boliviensis_boliviensis
ENSMODG00000018004	APOBEC1	97	83.333	ENSSHAG00000008925	APOBEC1	100	83.333	Sarcophilus_harrisii
ENSMODG00000018004	APOBEC1	73	60.819	ENSSARG00000000032	-	100	60.819	Sorex_araneus
ENSMODG00000018004	APOBEC1	54	65.625	ENSSARG00000011972	-	98	65.625	Sorex_araneus
ENSMODG00000018004	APOBEC1	90	43.256	ENSSPUG00000009044	-	82	43.256	Sphenodon_punctatus
ENSMODG00000018004	APOBEC1	100	64.407	ENSSSCG00000000668	APOBEC1	100	64.407	Sus_scrofa
ENSMODG00000018004	APOBEC1	60	47.586	ENSTGUG00000013118	-	99	47.586	Taeniopygia_guttata
ENSMODG00000018004	APOBEC1	94	61.086	ENSTBEG00000010043	APOBEC1	94	61.086	Tupaia_belangeri
ENSMODG00000018004	APOBEC1	79	64.706	ENSTTRG00000014015	APOBEC1	100	64.706	Tursiops_truncatus
ENSMODG00000018004	APOBEC1	99	66.953	ENSUAMG00000011636	APOBEC1	95	66.953	Ursus_americanus
ENSMODG00000018004	APOBEC1	98	67.241	ENSUMAG00000016552	APOBEC1	95	67.241	Ursus_maritimus
ENSMODG00000018004	APOBEC1	100	64.407	ENSVPAG00000001343	APOBEC1	100	64.407	Vicugna_pacos
ENSMODG00000018004	APOBEC1	100	67.373	ENSVVUG00000010522	APOBEC1	100	67.373	Vulpes_vulpes