EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMODG00000018051 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Monodelphis_domestica
Status: putative
Strand: Plus strand
Length: 51647 bases
Position: chr2:246651423-246703069
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMODP00000022505	RRM_1	PF00076.22	5.9e-54	1	4
ENSMODP00000022505	RRM_1	PF00076.22	5.9e-54	2	4
ENSMODP00000022505	RRM_1	PF00076.22	5.9e-54	3	4
ENSMODP00000022505	RRM_1	PF00076.22	5.9e-54	4	4

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMODT00000022898	-	1101	-	ENSMODP00000022505	367 (aa)	-	F7GEM7

Gene Model

Click here to download ENSMODG00000018051's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMODG00000018051's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMODG00000018051	-	88	66.460	ENSMODG00000012040	-	56	66.460
ENSMODG00000018051	-	98	59.055	ENSMODG00000016198	PABPC1L	65	59.055
ENSMODG00000018051	-	98	58.684	ENSMODG00000015024	-	60	58.684
ENSMODG00000018051	-	98	66.842	ENSMODG00000006222	PABPC1	60	66.842
ENSMODG00000018051	-	98	64.380	ENSMODG00000017105	-	60	64.380
ENSMODG00000018051	-	91	76.901	ENSMODG00000017657	-	57	76.901
ENSMODG00000018051	-	91	62.429	ENSMODG00000013156	-	58	62.429

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMODG00000018051	-	91	73.729	ENSG00000090621	PABPC4	99	81.513	Homo_sapiens
ENSMODG00000018051	-	96	70.933	ENSAPOG00000001161	pabpc4	60	70.933	Acanthochromis_polyacanthus
ENSMODG00000018051	-	91	73.729	ENSAMEG00000011535	-	56	73.729	Ailuropoda_melanoleuca
ENSMODG00000018051	-	98	49.730	ENSAMEG00000015083	-	60	49.730	Ailuropoda_melanoleuca
ENSMODG00000018051	-	96	71.467	ENSACIG00000023343	pabpc4	59	71.467	Amphilophus_citrinellus
ENSMODG00000018051	-	96	70.933	ENSAOCG00000021529	pabpc4	62	70.933	Amphiprion_ocellaris
ENSMODG00000018051	-	96	70.933	ENSAPEG00000019196	pabpc4	60	70.933	Amphiprion_percula
ENSMODG00000018051	-	96	70.933	ENSATEG00000007402	pabpc4	60	70.933	Anabas_testudineus
ENSMODG00000018051	-	95	74.797	ENSAPLG00000009729	-	59	74.797	Anas_platyrhynchos
ENSMODG00000018051	-	89	75.241	ENSACAG00000002544	PABPC4	56	75.241	Anolis_carolinensis
ENSMODG00000018051	-	91	73.729	ENSANAG00000025079	PABPC4	59	73.729	Aotus_nancymaae
ENSMODG00000018051	-	96	71.733	ENSACLG00000019558	pabpc4	60	71.733	Astatotilapia_calliptera
ENSMODG00000018051	-	96	68.232	ENSAMXG00000018779	pabpc4	58	68.232	Astyanax_mexicanus
ENSMODG00000018051	-	88	70.701	ENSBTAG00000048536	-	89	70.701	Bos_taurus
ENSMODG00000018051	-	91	74.011	ENSBTAG00000017125	PABPC4	58	74.011	Bos_taurus
ENSMODG00000018051	-	91	73.446	ENSCJAG00000002512	-	59	73.446	Callithrix_jacchus
ENSMODG00000018051	-	69	67.742	ENSCJAG00000045953	-	51	67.742	Callithrix_jacchus
ENSMODG00000018051	-	91	74.011	ENSCAFG00000003081	PABPC4	59	74.011	Canis_familiaris
ENSMODG00000018051	-	91	74.011	ENSCAFG00020004161	PABPC4	56	74.011	Canis_lupus_dingo
ENSMODG00000018051	-	91	63.068	ENSCHIG00000023385	-	58	63.068	Capra_hircus
ENSMODG00000018051	-	91	74.011	ENSCHIG00000019398	-	56	74.011	Capra_hircus
ENSMODG00000018051	-	91	74.011	ENSTSYG00000006532	PABPC4	59	74.011	Carlito_syrichta
ENSMODG00000018051	-	91	74.011	ENSCAPG00000015984	PABPC4	62	74.011	Cavia_aperea
ENSMODG00000018051	-	91	74.294	ENSCPOG00000009552	PABPC4	61	74.294	Cavia_porcellus
ENSMODG00000018051	-	91	73.729	ENSCCAG00000037306	PABPC4	59	73.729	Cebus_capucinus
ENSMODG00000018051	-	91	74.011	ENSCATG00000042164	PABPC4	59	74.011	Cercocebus_atys
ENSMODG00000018051	-	91	74.011	ENSCLAG00000011899	PABPC4	59	74.011	Chinchilla_lanigera
ENSMODG00000018051	-	91	74.011	ENSCSAG00000001135	PABPC4	56	74.011	Chlorocebus_sabaeus
ENSMODG00000018051	-	89	73.186	ENSCHOG00000005327	PABPC4	53	73.186	Choloepus_hoffmanni
ENSMODG00000018051	-	96	74.133	ENSCPBG00000001038	PABPC4	59	74.133	Chrysemys_picta_bellii
ENSMODG00000018051	-	91	74.011	ENSCANG00000034177	PABPC4	60	74.011	Colobus_angolensis_palliatus
ENSMODG00000018051	-	91	73.446	ENSCGRG00001018166	Pabpc4	61	73.446	Cricetulus_griseus_chok1gshd
ENSMODG00000018051	-	91	73.446	ENSCGRG00000009777	Pabpc4	61	73.446	Cricetulus_griseus_crigri
ENSMODG00000018051	-	96	70.400	ENSCSEG00000000130	pabpc4	60	70.400	Cynoglossus_semilaevis
ENSMODG00000018051	-	95	72.358	ENSCVAG00000019246	pabpc4	60	72.358	Cyprinodon_variegatus
ENSMODG00000018051	-	96	71.200	ENSDARG00000059259	pabpc4	62	71.200	Danio_rerio
ENSMODG00000018051	-	89	73.312	ENSDNOG00000018444	-	56	73.312	Dasypus_novemcinctus
ENSMODG00000018051	-	91	74.011	ENSDORG00000011581	Pabpc4	58	74.011	Dipodomys_ordii
ENSMODG00000018051	-	75	45.667	ENSETEG00000009172	-	51	45.667	Echinops_telfairi
ENSMODG00000018051	-	97	66.755	ENSEBUG00000000992	pabpc4	68	66.755	Eptatretus_burgeri
ENSMODG00000018051	-	98	66.755	ENSEBUG00000013782	pabpc4	63	66.755	Eptatretus_burgeri
ENSMODG00000018051	-	91	74.011	ENSEASG00005014119	PABPC4	56	74.011	Equus_asinus_asinus
ENSMODG00000018051	-	91	74.011	ENSECAG00000009396	PABPC4	56	74.011	Equus_caballus
ENSMODG00000018051	-	91	72.881	ENSEEUG00000002962	PABPC4	56	72.881	Erinaceus_europaeus
ENSMODG00000018051	-	96	70.133	ENSELUG00000003195	pabpc4	59	70.133	Esox_lucius
ENSMODG00000018051	-	91	74.011	ENSFCAG00000015254	-	59	74.011	Felis_catus
ENSMODG00000018051	-	96	72.533	ENSFALG00000000543	PABPC4	59	72.533	Ficedula_albicollis
ENSMODG00000018051	-	91	74.011	ENSFDAG00000020016	-	56	74.011	Fukomys_damarensis
ENSMODG00000018051	-	96	71.733	ENSFHEG00000007548	pabpc4	63	71.733	Fundulus_heteroclitus
ENSMODG00000018051	-	96	68.533	ENSGMOG00000019025	pabpc4	59	68.533	Gadus_morhua
ENSMODG00000018051	-	96	73.867	ENSGALG00000003800	PABPC4	59	73.867	Gallus_gallus
ENSMODG00000018051	-	95	74.457	ENSGAFG00000018195	pabpc4	95	74.457	Gambusia_affinis
ENSMODG00000018051	-	96	70.400	ENSGACG00000007179	pabpc4	60	70.400	Gasterosteus_aculeatus
ENSMODG00000018051	-	96	74.133	ENSGAGG00000001888	PABPC4	59	74.133	Gopherus_agassizii
ENSMODG00000018051	-	91	73.729	ENSGGOG00000004002	PABPC4	59	73.729	Gorilla_gorilla
ENSMODG00000018051	-	96	71.733	ENSHBUG00000020206	pabpc4	60	71.733	Haplochromis_burtoni
ENSMODG00000018051	-	91	74.011	ENSHGLG00000011162	PABPC4	59	74.011	Heterocephalus_glaber_female
ENSMODG00000018051	-	91	74.011	ENSHGLG00100001580	PABPC4	59	74.011	Heterocephalus_glaber_male
ENSMODG00000018051	-	96	70.933	ENSHCOG00000012694	pabpc4	61	70.933	Hippocampus_comes
ENSMODG00000018051	-	96	70.667	ENSIPUG00000016620	pabpc4	59	70.667	Ictalurus_punctatus
ENSMODG00000018051	-	91	74.294	ENSSTOG00000010416	PABPC4	60	74.294	Ictidomys_tridecemlineatus
ENSMODG00000018051	-	91	74.212	ENSJJAG00000007781	Pabpc4	57	74.212	Jaculus_jaculus
ENSMODG00000018051	-	96	71.467	ENSKMAG00000013597	pabpc4	62	71.467	Kryptolebias_marmoratus
ENSMODG00000018051	-	96	70.400	ENSLBEG00000013654	pabpc4	59	70.400	Labrus_bergylta
ENSMODG00000018051	-	96	73.067	ENSLACG00000011907	PABPC4	59	73.067	Latimeria_chalumnae
ENSMODG00000018051	-	96	72.533	ENSLOCG00000001877	pabpc4	59	72.533	Lepisosteus_oculatus
ENSMODG00000018051	-	91	74.011	ENSLAFG00000000151	PABPC4	60	74.011	Loxodonta_africana
ENSMODG00000018051	-	91	74.011	ENSMFAG00000041481	PABPC4	59	74.011	Macaca_fascicularis
ENSMODG00000018051	-	91	74.011	ENSMMUG00000007497	PABPC4	56	74.011	Macaca_mulatta
ENSMODG00000018051	-	91	74.011	ENSMNEG00000043054	PABPC4	59	74.011	Macaca_nemestrina
ENSMODG00000018051	-	91	74.011	ENSMLEG00000040716	PABPC4	59	74.011	Mandrillus_leucophaeus
ENSMODG00000018051	-	96	70.667	ENSMAMG00000010025	pabpc4	62	70.667	Mastacembelus_armatus
ENSMODG00000018051	-	96	71.467	ENSMZEG00005006141	pabpc4	63	71.467	Maylandia_zebra
ENSMODG00000018051	-	89	76.415	ENSMGAG00000005408	PABPC4	54	76.415	Meleagris_gallopavo
ENSMODG00000018051	-	69	62.500	ENSMAUG00000001295	-	62	62.500	Mesocricetus_auratus
ENSMODG00000018051	-	98	52.553	ENSMAUG00000019763	-	60	52.553	Mesocricetus_auratus
ENSMODG00000018051	-	80	66.071	ENSMAUG00000004089	-	90	66.071	Mesocricetus_auratus
ENSMODG00000018051	-	89	66.559	ENSMICG00000036729	-	60	64.653	Microcebus_murinus
ENSMODG00000018051	-	91	74.011	ENSMICG00000016633	-	68	74.011	Microcebus_murinus
ENSMODG00000018051	-	91	73.729	ENSMOCG00000006763	Pabpc4	60	73.729	Microtus_ochrogaster
ENSMODG00000018051	-	96	70.933	ENSMMOG00000002363	pabpc4	61	70.933	Mola_mola
ENSMODG00000018051	-	96	70.667	ENSMALG00000011017	pabpc4	59	70.667	Monopterus_albus
ENSMODG00000018051	-	89	69.872	MGP_CAROLIEiJ_G0024864	-	56	69.872	Mus_caroli
ENSMODG00000018051	-	87	79.730	MGP_CAROLIEiJ_G0026435	-	100	79.730	Mus_caroli
ENSMODG00000018051	-	95	70.286	ENSMUSG00000011257	Pabpc4	99	70.286	Mus_musculus
ENSMODG00000018051	-	87	79.730	MGP_PahariEiJ_G0028765	Pabpc4	100	79.730	Mus_pahari
ENSMODG00000018051	-	87	79.054	MGP_SPRETEiJ_G0027415	Pabpc4	100	79.054	Mus_spretus
ENSMODG00000018051	-	84	46.057	ENSMPUG00000006836	-	54	46.057	Mustela_putorius_furo
ENSMODG00000018051	-	91	74.011	ENSMPUG00000014414	-	56	74.011	Mustela_putorius_furo
ENSMODG00000018051	-	91	73.729	ENSMLUG00000012068	PABPC4	60	73.729	Myotis_lucifugus
ENSMODG00000018051	-	91	74.011	ENSNGAG00000018292	Pabpc4	60	74.011	Nannospalax_galili
ENSMODG00000018051	-	69	66.129	ENSNBRG00000010047	-	59	66.129	Neolamprologus_brichardi
ENSMODG00000018051	-	95	76.526	ENSNBRG00000009708	pabpc4	98	76.526	Neolamprologus_brichardi
ENSMODG00000018051	-	91	74.011	ENSNLEG00000011928	PABPC4	59	74.011	Nomascus_leucogenys
ENSMODG00000018051	-	91	73.446	ENSOPRG00000011984	PABPC4	60	73.446	Ochotona_princeps
ENSMODG00000018051	-	89	68.657	ENSODEG00000017434	-	50	67.742	Octodon_degus
ENSMODG00000018051	-	91	73.729	ENSODEG00000006592	-	60	73.729	Octodon_degus
ENSMODG00000018051	-	96	71.733	ENSONIG00000008176	pabpc4	60	71.733	Oreochromis_niloticus
ENSMODG00000018051	-	96	73.600	ENSOANG00000010001	PABPC4	59	73.600	Ornithorhynchus_anatinus
ENSMODG00000018051	-	91	73.729	ENSOCUG00000000562	PABPC4	51	73.729	Oryctolagus_cuniculus
ENSMODG00000018051	-	96	70.933	ENSORLG00000017479	pabpc4	59	70.933	Oryzias_latipes
ENSMODG00000018051	-	96	70.933	ENSORLG00020018644	pabpc4	62	70.933	Oryzias_latipes_hni
ENSMODG00000018051	-	96	70.933	ENSORLG00015015042	pabpc4	59	70.933	Oryzias_latipes_hsok
ENSMODG00000018051	-	96	71.467	ENSOMEG00000014410	pabpc4	62	71.467	Oryzias_melastigma
ENSMODG00000018051	-	91	74.011	ENSOGAG00000004067	PABPC4	57	74.011	Otolemur_garnettii
ENSMODG00000018051	-	91	74.011	ENSOARG00000020060	PABPC4	56	74.011	Ovis_aries
ENSMODG00000018051	-	91	73.729	ENSPPAG00000043625	PABPC4	59	73.729	Pan_paniscus
ENSMODG00000018051	-	91	74.011	ENSPPRG00000024727	PABPC4	59	74.011	Panthera_pardus
ENSMODG00000018051	-	91	74.011	ENSPTIG00000005829	PABPC4	59	74.011	Panthera_tigris_altaica
ENSMODG00000018051	-	91	73.729	ENSPTRG00000000573	PABPC4	59	73.729	Pan_troglodytes
ENSMODG00000018051	-	91	74.011	ENSPANG00000009484	PABPC4	59	74.011	Papio_anubis
ENSMODG00000018051	-	96	70.933	ENSPKIG00000025356	pabpc4	61	70.933	Paramormyrops_kingsleyae
ENSMODG00000018051	-	96	74.133	ENSPSIG00000016892	PABPC4	59	74.133	Pelodiscus_sinensis
ENSMODG00000018051	-	96	70.933	ENSPMGG00000009073	pabpc4	62	70.933	Periophthalmus_magnuspinnatus
ENSMODG00000018051	-	91	73.446	ENSPEMG00000023569	-	59	73.446	Peromyscus_maniculatus_bairdii
ENSMODG00000018051	-	91	71.469	ENSPEMG00000024193	-	58	71.469	Peromyscus_maniculatus_bairdii
ENSMODG00000018051	-	97	66.667	ENSPMAG00000002836	pabpc4	66	66.667	Petromyzon_marinus
ENSMODG00000018051	-	85	65.106	ENSPMAG00000007885	pabpc4	50	65.385	Petromyzon_marinus
ENSMODG00000018051	-	91	77.401	ENSPCIG00000020674	PABPC4	69	77.401	Phascolarctos_cinereus
ENSMODG00000018051	-	96	71.467	ENSPFOG00000002682	pabpc4	60	71.467	Poecilia_formosa
ENSMODG00000018051	-	96	71.467	ENSPLAG00000010112	pabpc4	60	71.467	Poecilia_latipinna
ENSMODG00000018051	-	96	71.467	ENSPMEG00000019739	pabpc4	60	71.467	Poecilia_mexicana
ENSMODG00000018051	-	96	71.467	ENSPREG00000001589	pabpc4	60	71.467	Poecilia_reticulata
ENSMODG00000018051	-	91	73.729	ENSPPYG00000001506	PABPC4	56	73.729	Pongo_abelii
ENSMODG00000018051	-	91	68.079	ENSPCAG00000003341	PABPC4	56	68.079	Procavia_capensis
ENSMODG00000018051	-	81	60.252	ENSPCOG00000025882	-	59	60.252	Propithecus_coquereli
ENSMODG00000018051	-	91	74.011	ENSPCOG00000023725	-	59	74.011	Propithecus_coquereli
ENSMODG00000018051	-	89	74.051	ENSPVAG00000002187	PABPC4	53	74.051	Pteropus_vampyrus
ENSMODG00000018051	-	96	71.733	ENSPNYG00000006134	pabpc4	60	71.733	Pundamilia_nyererei
ENSMODG00000018051	-	96	70.667	ENSPNAG00000024355	pabpc4	59	70.667	Pygocentrus_nattereri
ENSMODG00000018051	-	91	71.875	ENSRNOG00000028592	AABR07035074.1	59	71.875	Rattus_norvegicus
ENSMODG00000018051	-	91	73.164	ENSRNOG00000015642	Pabpc4	58	73.164	Rattus_norvegicus
ENSMODG00000018051	-	91	74.359	ENSRBIG00000039761	PABPC4	59	74.011	Rhinopithecus_bieti
ENSMODG00000018051	-	91	74.011	ENSRROG00000033355	PABPC4	59	74.011	Rhinopithecus_roxellana
ENSMODG00000018051	-	91	73.729	ENSSBOG00000026193	PABPC4	59	73.729	Saimiri_boliviensis_boliviensis
ENSMODG00000018051	-	91	77.401	ENSSHAG00000018139	PABPC4	59	77.401	Sarcophilus_harrisii
ENSMODG00000018051	-	91	72.881	ENSSFOG00015023514	pabpc4	58	72.881	Scleropages_formosus
ENSMODG00000018051	-	96	70.667	ENSSMAG00000009007	pabpc4	60	70.667	Scophthalmus_maximus
ENSMODG00000018051	-	96	70.667	ENSSDUG00000012683	pabpc4	65	70.667	Seriola_dumerili
ENSMODG00000018051	-	96	70.667	ENSSLDG00000013025	pabpc4	64	70.667	Seriola_lalandi_dorsalis
ENSMODG00000018051	-	89	72.871	ENSSARG00000000310	PABPC4	50	72.871	Sorex_araneus
ENSMODG00000018051	-	96	73.867	ENSSPUG00000003204	PABPC4	60	73.867	Sphenodon_punctatus
ENSMODG00000018051	-	96	70.667	ENSSPAG00000009252	pabpc4	65	70.667	Stegastes_partitus
ENSMODG00000018051	-	91	74.011	ENSSSCG00000003660	-	59	74.011	Sus_scrofa
ENSMODG00000018051	-	96	72.800	ENSTGUG00000001266	PABPC4	57	72.800	Taeniopygia_guttata
ENSMODG00000018051	-	96	70.933	ENSTRUG00000005907	pabpc4	60	70.933	Takifugu_rubripes
ENSMODG00000018051	-	96	70.400	ENSTNIG00000016902	pabpc4	60	70.400	Tetraodon_nigroviridis
ENSMODG00000018051	-	87	57.278	ENSTBEG00000009035	PABPC4	53	57.278	Tupaia_belangeri
ENSMODG00000018051	-	81	46.316	ENSTTRG00000014340	PABPC4	50	56.467	Tursiops_truncatus
ENSMODG00000018051	-	91	74.011	ENSUAMG00000000303	PABPC4	59	74.011	Ursus_americanus
ENSMODG00000018051	-	98	70.341	ENSUMAG00000019585	PABPC4	71	70.341	Ursus_maritimus
ENSMODG00000018051	-	91	74.011	ENSVVUG00000005215	PABPC4	59	74.011	Vulpes_vulpes
ENSMODG00000018051	-	91	73.964	ENSXETG00000027221	-	100	73.964	Xenopus_tropicalis
ENSMODG00000018051	-	96	67.467	ENSXETG00000010946	pabpc4	60	67.467	Xenopus_tropicalis
ENSMODG00000018051	-	89	73.270	ENSXCOG00000013190	pabpc4	98	69.811	Xiphophorus_couchianus
ENSMODG00000018051	-	96	71.200	ENSXMAG00000019007	pabpc4	60	71.200	Xiphophorus_maculatus