EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMODG00000018546 (Gene tree)
Gene ID: 100618193
Gene Symbol: -
Alias: -
Full Name: DEAD-box helicase 43
Gene Type: protein_coding
Species: Monodelphis_domestica
Status: putative
Strand: Plus strand
Length: 17999 bases
Position: chr2:325341491-325359489
Accession: 100618193
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMODP00000023130	KH_1	PF00013.29	1.3e-12	1	1
ENSMODP00000023130	DEAD	PF00270.29	1.9e-44	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMODT00000023543	-	3873	-	ENSMODP00000023130	648 (aa)	XP_007484259	F7GCW4

Gene Model

Click here to download ENSMODG00000018546's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMODG00000018546's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMODG00000018546	-	56	34.853	ENSMODG00000003745	DDX49	73	34.853
ENSMODG00000018546	-	67	34.753	ENSMODG00000004714	DDX41	73	34.763
ENSMODG00000018546	-	59	40.097	ENSMODG00000009975	DDX23	50	40.097
ENSMODG00000018546	-	53	33.815	ENSMODG00000013375	DDX6	70	33.815
ENSMODG00000018546	-	56	31.593	ENSMODG00000002190	-	87	31.593
ENSMODG00000018546	-	90	70.205	ENSMODG00000014335	-	99	70.205
ENSMODG00000018546	-	58	31.830	ENSMODG00000021284	EIF4A2	91	31.830
ENSMODG00000018546	-	62	34.889	ENSMODG00000012873	DDX59	63	34.889
ENSMODG00000018546	-	58	31.714	ENSMODG00000002493	DDX52	63	31.714
ENSMODG00000018546	-	68	42.697	ENSMODG00000003743	DDX5	65	41.845
ENSMODG00000018546	-	58	39.796	ENSMODG00000021097	-	83	39.152
ENSMODG00000018546	-	57	30.769	ENSMODG00000007090	EIF4A1	91	30.133
ENSMODG00000018546	-	54	35.813	ENSMODG00000010727	DDX21	50	35.813
ENSMODG00000018546	-	50	31.988	ENSMODG00000012519	DDX55	58	31.988
ENSMODG00000018546	-	68	44.966	ENSMODG00000009681	DDX17	70	44.966
ENSMODG00000018546	-	61	33.666	ENSMODG00000018223	DDX47	86	33.666
ENSMODG00000018546	-	52	30.659	ENSMODG00000004275	DDX25	72	30.226
ENSMODG00000018546	-	56	31.593	ENSMODG00000003697	-	87	31.593
ENSMODG00000018546	-	59	39.130	ENSMODG00000019511	DDX4	53	39.130
ENSMODG00000018546	-	58	40.476	ENSMODG00000002336	DDX24	50	40.476
ENSMODG00000018546	-	52	32.665	ENSMODG00000000533	DDX18	56	32.665

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMODG00000018546	-	92	58.929	ENSAPOG00000001712	ddx43	80	61.391	Acanthochromis_polyacanthus
ENSMODG00000018546	-	72	62.151	ENSACIG00000012170	ddx43	73	62.151	Amphilophus_citrinellus
ENSMODG00000018546	-	91	60.891	ENSAOCG00000001331	ddx43	80	62.827	Amphiprion_ocellaris
ENSMODG00000018546	-	86	63.492	ENSAPEG00000001133	ddx43	82	62.393	Amphiprion_percula
ENSMODG00000018546	-	86	62.522	ENSATEG00000012664	ddx43	82	62.522	Anabas_testudineus
ENSMODG00000018546	-	85	68.214	ENSAPLG00000010182	-	99	73.904	Anas_platyrhynchos
ENSMODG00000018546	-	89	66.895	ENSACAG00000004387	-	94	65.347	Anolis_carolinensis
ENSMODG00000018546	-	93	59.194	ENSACLG00000026081	ddx43	84	61.750	Astatotilapia_calliptera
ENSMODG00000018546	-	86	63.363	ENSAMXG00000004457	ddx43	84	58.614	Astyanax_mexicanus
ENSMODG00000018546	-	71	46.497	WBGene00013214	Y54G11A.3	93	46.497	Caenorhabditis_elegans
ENSMODG00000018546	-	79	54.175	ENSCVAG00000009980	ddx43	81	53.259	Cyprinodon_variegatus
ENSMODG00000018546	-	95	57.919	ENSDARG00000022614	ddx43	79	62.982	Danio_rerio
ENSMODG00000018546	-	92	45.794	FBgn0037549	CG7878	84	47.421	Drosophila_melanogaster
ENSMODG00000018546	-	77	49.004	ENSETEG00000014626	-	97	48.343	Echinops_telfairi
ENSMODG00000018546	-	62	49.393	ENSETEG00000019547	-	68	48.062	Echinops_telfairi
ENSMODG00000018546	-	92	61.526	ENSELUG00000012126	ddx43	85	64.071	Esox_lucius
ENSMODG00000018546	-	92	67.613	ENSFALG00000007042	-	89	67.736	Ficedula_albicollis
ENSMODG00000018546	-	72	68.172	ENSFHEG00000011226	ddx43	86	67.857	Fundulus_heteroclitus
ENSMODG00000018546	-	68	65.533	ENSGMOG00000004178	ddx43	100	63.420	Gadus_morhua
ENSMODG00000018546	-	67	75.286	ENSGALG00000015928	-	99	75.286	Gallus_gallus
ENSMODG00000018546	-	86	59.516	ENSGAFG00000012622	ddx43	82	59.516	Gambusia_affinis
ENSMODG00000018546	-	86	59.715	ENSGACG00000012072	ddx43	99	58.520	Gasterosteus_aculeatus
ENSMODG00000018546	-	99	61.414	ENSGAGG00000025230	-	87	65.825	Gopherus_agassizii
ENSMODG00000018546	-	86	62.478	ENSHBUG00000011653	ddx43	84	61.921	Haplochromis_burtoni
ENSMODG00000018546	-	92	55.629	ENSHCOG00000014704	ddx43	85	59.464	Hippocampus_comes
ENSMODG00000018546	-	88	62.069	ENSIPUG00000023423	ddx43	84	62.153	Ictalurus_punctatus
ENSMODG00000018546	-	92	58.842	ENSKMAG00000016167	ddx43	84	61.709	Kryptolebias_marmoratus
ENSMODG00000018546	-	86	60.526	ENSLBEG00000007913	ddx43	82	60.877	Labrus_bergylta
ENSMODG00000018546	-	73	67.351	ENSLACG00000000741	ddx43	100	67.351	Latimeria_chalumnae
ENSMODG00000018546	-	94	61.039	ENSLOCG00000016170	ddx43	89	62.000	Lepisosteus_oculatus
ENSMODG00000018546	-	80	60.795	ENSMAMG00000022128	ddx43	77	60.681	Mastacembelus_armatus
ENSMODG00000018546	-	93	59.194	ENSMZEG00005027349	ddx43	84	61.750	Maylandia_zebra
ENSMODG00000018546	-	88	68.706	ENSMGAG00000013832	-	99	68.706	Meleagris_gallopavo
ENSMODG00000018546	-	86	60.284	ENSMMOG00000007346	ddx43	83	60.211	Mola_mola
ENSMODG00000018546	-	94	58.188	ENSMALG00000020673	ddx43	83	60.102	Monopterus_albus
ENSMODG00000018546	-	86	63.074	ENSNBRG00000010942	ddx43	84	62.326	Neolamprologus_brichardi
ENSMODG00000018546	-	89	62.181	ENSONIG00000001195	ddx43	89	61.642	Oreochromis_niloticus
ENSMODG00000018546	-	56	72.043	ENSOANG00000006467	-	100	70.235	Ornithorhynchus_anatinus
ENSMODG00000018546	-	89	60.708	ENSORLG00000002267	ddx43	91	60.708	Oryzias_latipes
ENSMODG00000018546	-	90	60.637	ENSORLG00020018592	ddx43	92	60.637	Oryzias_latipes_hni
ENSMODG00000018546	-	90	60.438	ENSORLG00015004854	ddx43	91	60.438	Oryzias_latipes_hsok
ENSMODG00000018546	-	87	60.751	ENSOMEG00000023418	ddx43	90	60.575	Oryzias_melastigma
ENSMODG00000018546	-	92	61.204	ENSPKIG00000002941	ddx43	82	62.674	Paramormyrops_kingsleyae
ENSMODG00000018546	-	92	64.839	ENSPSIG00000002202	-	90	68.917	Pelodiscus_sinensis
ENSMODG00000018546	-	68	97.285	ENSPCIG00000017981	-	100	97.285	Phascolarctos_cinereus
ENSMODG00000018546	-	90	68.197	ENSPCIG00000002492	-	95	68.197	Phascolarctos_cinereus
ENSMODG00000018546	-	86	59.896	ENSPFOG00000004241	ddx43	86	58.497	Poecilia_formosa
ENSMODG00000018546	-	86	59.965	ENSPLAG00000023362	ddx43	86	58.660	Poecilia_latipinna
ENSMODG00000018546	-	90	58.306	ENSPMEG00000004870	ddx43	86	58.170	Poecilia_mexicana
ENSMODG00000018546	-	86	54.787	ENSPREG00000000923	ddx43	85	53.756	Poecilia_reticulata
ENSMODG00000018546	-	92	57.190	ENSPNYG00000009064	ddx43	86	58.151	Pundamilia_nyererei
ENSMODG00000018546	-	86	64.311	ENSPNAG00000001232	ddx43	79	64.311	Pygocentrus_nattereri
ENSMODG00000018546	-	88	75.747	ENSSHAG00000016933	-	98	75.747	Sarcophilus_harrisii
ENSMODG00000018546	-	98	93.313	ENSSHAG00000001847	-	100	94.557	Sarcophilus_harrisii
ENSMODG00000018546	-	85	61.151	ENSSFOG00015012193	ddx43	89	60.000	Scleropages_formosus
ENSMODG00000018546	-	90	60.267	ENSSMAG00000019288	ddx43	81	60.504	Scophthalmus_maximus
ENSMODG00000018546	-	92	58.665	ENSSDUG00000020120	ddx43	81	61.955	Seriola_dumerili
ENSMODG00000018546	-	92	59.333	ENSSLDG00000017225	ddx43	82	59.966	Seriola_lalandi_dorsalis
ENSMODG00000018546	-	75	62.651	ENSSPUG00000018097	-	100	62.651	Sphenodon_punctatus
ENSMODG00000018546	-	86	62.676	ENSSPAG00000006858	ddx43	84	62.287	Stegastes_partitus
ENSMODG00000018546	-	94	64.610	ENSTGUG00000012684	-	99	66.275	Taeniopygia_guttata
ENSMODG00000018546	-	86	56.552	ENSTRUG00000012795	ddx43	86	55.912	Takifugu_rubripes
ENSMODG00000018546	-	86	59.895	ENSTNIG00000009822	ddx43	97	60.317	Tetraodon_nigroviridis
ENSMODG00000018546	-	100	61.037	ENSXETG00000011767	ddx43	90	64.975	Xenopus_tropicalis
ENSMODG00000018546	-	71	67.241	ENSXCOG00000013810	ddx43	71	67.241	Xiphophorus_couchianus
ENSMODG00000018546	-	86	59.931	ENSXMAG00000017126	ddx43	82	59.931	Xiphophorus_maculatus