EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMODG00000018653 (Gene tree)
Gene ID: 100018533
Gene Symbol: -
Alias: -
Full Name: RNA polymerase II subunit D
Gene Type: protein_coding
Species: Monodelphis_domestica
Status: putative
Strand: Plus strand
Length: 7410 bases
Position: chr4:110042866-110050275
Accession: 100018533
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMODP00000023256	RNA_pol_Rpb4	PF03874.16	2.5e-26	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMODT00000023670	-	4350	-	ENSMODP00000023256	142 (aa)	XP_001366384	F7B1V9

Gene Model

Click here to download ENSMODG00000018653's gene model file

Pathways

Pathway ID	Pathway Name	Source
mdo03020	RNA polymerase	KEGG
mdo05016	Huntington disease	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMODG00000018653's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMODG00000018653	-	100	82.394	ENSMODG00000025029	-	100	82.394
ENSMODG00000018653	-	100	83.099	ENSMODG00000025027	-	100	83.099
ENSMODG00000018653	-	100	83.099	ENSMODG00000025026	-	100	83.099
ENSMODG00000018653	-	100	82.394	ENSMODG00000025033	-	100	82.394
ENSMODG00000018653	-	100	81.690	ENSMODG00000025032	-	100	81.690
ENSMODG00000018653	-	100	82.394	ENSMODG00000025031	-	100	82.394
ENSMODG00000018653	-	100	83.099	ENSMODG00000025030	-	100	83.099
ENSMODG00000018653	-	100	82.394	ENSMODG00000025036	-	100	82.394
ENSMODG00000018653	-	100	82.394	ENSMODG00000025035	-	100	82.394
ENSMODG00000018653	-	100	82.394	ENSMODG00000025034	-	100	82.394
ENSMODG00000018653	-	100	83.099	ENSMODG00000025028	-	100	83.099

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMODG00000018653	-	100	98.592	ENSG00000144231	POLR2D	100	99.038	Homo_sapiens
ENSMODG00000018653	-	99	90.780	ENSAPOG00000023553	polr2d	98	90.780	Acanthochromis_polyacanthus
ENSMODG00000018653	-	100	97.222	ENSAMEG00000011746	POLR2D	100	97.222	Ailuropoda_melanoleuca
ENSMODG00000018653	-	99	90.780	ENSAOCG00000007295	polr2d	98	90.780	Amphiprion_ocellaris
ENSMODG00000018653	-	99	90.780	ENSAPEG00000018714	polr2d	98	90.780	Amphiprion_percula
ENSMODG00000018653	-	100	91.667	ENSATEG00000020416	polr2d	100	91.667	Anabas_testudineus
ENSMODG00000018653	-	100	97.887	ENSACAG00000005255	POLR2D	100	97.887	Anolis_carolinensis
ENSMODG00000018653	-	100	98.592	ENSANAG00000019959	POLR2D	100	98.592	Aotus_nancymaae
ENSMODG00000018653	-	100	90.972	ENSACLG00000009919	polr2d	100	70.139	Astatotilapia_calliptera
ENSMODG00000018653	-	94	95.489	ENSAMXG00000008954	polr2d	100	90.909	Astyanax_mexicanus
ENSMODG00000018653	-	100	97.887	ENSBTAG00000053244	POLR2D	100	97.887	Bos_taurus
ENSMODG00000018653	-	99	58.333	WBGene00018391	rpb-4	100	58.333	Caenorhabditis_elegans
ENSMODG00000018653	-	100	98.592	ENSCJAG00000042216	-	100	98.592	Callithrix_jacchus
ENSMODG00000018653	-	100	97.887	ENSCJAG00000021814	-	100	97.887	Callithrix_jacchus
ENSMODG00000018653	-	100	98.592	ENSCAFG00000004311	POLR2D	100	98.592	Canis_familiaris
ENSMODG00000018653	-	100	98.592	ENSCAFG00020003617	POLR2D	100	98.592	Canis_lupus_dingo
ENSMODG00000018653	-	100	97.183	ENSCHIG00000025995	POLR2D	100	97.183	Capra_hircus
ENSMODG00000018653	-	82	98.291	ENSTSYG00000036021	POLR2D	100	98.291	Carlito_syrichta
ENSMODG00000018653	-	100	97.183	ENSCPOG00000002571	POLR2D	100	97.183	Cavia_porcellus
ENSMODG00000018653	-	100	98.592	ENSCCAG00000037709	POLR2D	100	98.592	Cebus_capucinus
ENSMODG00000018653	-	100	97.887	ENSCATG00000036749	POLR2D	100	97.887	Cercocebus_atys
ENSMODG00000018653	-	100	97.887	ENSCLAG00000004449	POLR2D	100	97.887	Chinchilla_lanigera
ENSMODG00000018653	-	100	97.887	ENSCSAG00000016861	POLR2D	100	97.887	Chlorocebus_sabaeus
ENSMODG00000018653	-	82	99.145	ENSCHOG00000013850	POLR2D	100	99.145	Choloepus_hoffmanni
ENSMODG00000018653	-	100	97.183	ENSCPBG00000019132	POLR2D	51	97.183	Chrysemys_picta_bellii
ENSMODG00000018653	-	90	87.500	ENSCING00000011474	-	96	87.500	Ciona_intestinalis
ENSMODG00000018653	-	90	87.500	ENSCSAVG00000008353	-	88	87.500	Ciona_savignyi
ENSMODG00000018653	-	100	98.592	ENSCANG00000043665	POLR2D	100	98.592	Colobus_angolensis_palliatus
ENSMODG00000018653	-	100	98.592	ENSCGRG00001013608	Polr2d	100	98.592	Cricetulus_griseus_chok1gshd
ENSMODG00000018653	-	82	99.145	ENSCGRG00000012624	Polr2d	100	99.145	Cricetulus_griseus_crigri
ENSMODG00000018653	-	100	90.972	ENSCSEG00000006147	polr2d	100	90.972	Cynoglossus_semilaevis
ENSMODG00000018653	-	100	91.667	ENSCVAG00000000779	polr2d	100	91.667	Cyprinodon_variegatus
ENSMODG00000018653	-	100	92.958	ENSDARG00000076509	polr2d	100	92.958	Danio_rerio
ENSMODG00000018653	-	100	96.479	ENSDNOG00000008527	POLR2D	100	96.479	Dasypus_novemcinctus
ENSMODG00000018653	-	100	97.887	ENSDORG00000026897	Polr2d	100	97.887	Dipodomys_ordii
ENSMODG00000018653	-	92	78.462	FBgn0263757	Rpb4	94	78.462	Drosophila_melanogaster
ENSMODG00000018653	-	100	92.958	ENSEBUG00000007675	polr2d	100	92.958	Eptatretus_burgeri
ENSMODG00000018653	-	100	97.887	ENSEASG00005007103	POLR2D	100	97.887	Equus_asinus_asinus
ENSMODG00000018653	-	100	98.592	ENSECAG00000000556	POLR2D	100	98.592	Equus_caballus
ENSMODG00000018653	-	99	92.199	ENSELUG00000005928	polr2d	99	92.199	Esox_lucius
ENSMODG00000018653	-	100	98.592	ENSFCAG00000027816	POLR2D	100	98.592	Felis_catus
ENSMODG00000018653	-	100	99.296	ENSFALG00000003528	POLR2D	100	99.296	Ficedula_albicollis
ENSMODG00000018653	-	100	97.183	ENSFDAG00000007217	POLR2D	100	97.183	Fukomys_damarensis
ENSMODG00000018653	-	100	95.105	ENSGMOG00000001823	polr2d	99	95.105	Gadus_morhua
ENSMODG00000018653	-	100	98.592	ENSGALG00000002057	POLR2D	100	98.592	Gallus_gallus
ENSMODG00000018653	-	100	92.361	ENSGAFG00000016932	polr2d	71	92.361	Gambusia_affinis
ENSMODG00000018653	-	100	90.972	ENSGACG00000004639	polr2d	100	90.972	Gasterosteus_aculeatus
ENSMODG00000018653	-	100	97.183	ENSGAGG00000021308	POLR2D	100	97.183	Gopherus_agassizii
ENSMODG00000018653	-	100	98.592	ENSGGOG00000004723	POLR2D	100	98.592	Gorilla_gorilla
ENSMODG00000018653	-	100	97.887	ENSHGLG00000016570	Polr2d	100	97.887	Heterocephalus_glaber_female
ENSMODG00000018653	-	100	97.887	ENSHGLG00100013785	Polr2d	100	97.887	Heterocephalus_glaber_male
ENSMODG00000018653	-	100	89.437	ENSHCOG00000006425	polr2d	100	89.437	Hippocampus_comes
ENSMODG00000018653	-	100	92.254	ENSIPUG00000011192	polr2d	100	92.254	Ictalurus_punctatus
ENSMODG00000018653	-	100	96.479	ENSSTOG00000023329	POLR2D	100	96.479	Ictidomys_tridecemlineatus
ENSMODG00000018653	-	82	93.162	ENSJJAG00000005723	-	94	93.162	Jaculus_jaculus
ENSMODG00000018653	-	100	88.028	ENSJJAG00000000783	-	100	88.028	Jaculus_jaculus
ENSMODG00000018653	-	100	97.183	ENSJJAG00000015053	-	100	97.183	Jaculus_jaculus
ENSMODG00000018653	-	85	92.562	ENSKMAG00000010677	polr2d	68	92.562	Kryptolebias_marmoratus
ENSMODG00000018653	-	100	96.479	ENSLACG00000017253	POLR2D	100	96.479	Latimeria_chalumnae
ENSMODG00000018653	-	100	92.361	ENSLOCG00000009106	polr2d	100	92.361	Lepisosteus_oculatus
ENSMODG00000018653	-	100	97.887	ENSLAFG00000001848	POLR2D	100	97.887	Loxodonta_africana
ENSMODG00000018653	-	100	97.887	ENSMFAG00000031937	POLR2D	100	97.887	Macaca_fascicularis
ENSMODG00000018653	-	100	97.887	ENSMMUG00000001989	POLR2D	100	97.887	Macaca_mulatta
ENSMODG00000018653	-	100	97.887	ENSMNEG00000035505	POLR2D	100	97.887	Macaca_nemestrina
ENSMODG00000018653	-	100	97.887	ENSMLEG00000035827	POLR2D	100	97.887	Mandrillus_leucophaeus
ENSMODG00000018653	-	100	98.592	ENSMGAG00000001248	POLR2D	100	98.592	Meleagris_gallopavo
ENSMODG00000018653	-	100	97.887	ENSMAUG00000014518	Polr2d	100	97.887	Mesocricetus_auratus
ENSMODG00000018653	-	100	97.887	ENSMICG00000009931	POLR2D	100	97.887	Microcebus_murinus
ENSMODG00000018653	-	100	95.775	ENSMOCG00000019367	Polr2d	100	95.775	Microtus_ochrogaster
ENSMODG00000018653	-	100	91.667	ENSMALG00000018266	polr2d	100	91.667	Monopterus_albus
ENSMODG00000018653	-	100	98.592	MGP_CAROLIEiJ_G0022066	Polr2d	100	98.592	Mus_caroli
ENSMODG00000018653	-	100	98.592	ENSMUSG00000024258	Polr2d	100	98.592	Mus_musculus
ENSMODG00000018653	-	100	98.592	MGP_PahariEiJ_G0018800	Polr2d	100	98.592	Mus_pahari
ENSMODG00000018653	-	100	98.592	MGP_SPRETEiJ_G0022977	Polr2d	100	98.592	Mus_spretus
ENSMODG00000018653	-	100	98.592	ENSMPUG00000016685	POLR2D	100	98.592	Mustela_putorius_furo
ENSMODG00000018653	-	83	99.153	ENSMLUG00000006862	POLR2D	100	99.153	Myotis_lucifugus
ENSMODG00000018653	-	100	98.592	ENSNGAG00000014862	Polr2d	100	98.592	Nannospalax_galili
ENSMODG00000018653	-	100	98.592	ENSNLEG00000027191	POLR2D	100	98.592	Nomascus_leucogenys
ENSMODG00000018653	-	82	98.291	ENSOPRG00000005327	POLR2D	100	98.291	Ochotona_princeps
ENSMODG00000018653	-	100	97.887	ENSODEG00000005262	POLR2D	100	97.887	Octodon_degus
ENSMODG00000018653	-	100	91.667	ENSONIG00000017290	polr2d	100	91.667	Oreochromis_niloticus
ENSMODG00000018653	-	83	100.000	ENSOANG00000013216	POLR2D	100	100.000	Ornithorhynchus_anatinus
ENSMODG00000018653	-	100	95.775	ENSOCUG00000023403	-	100	95.775	Oryctolagus_cuniculus
ENSMODG00000018653	-	100	90.909	ENSOCUG00000021449	-	100	90.909	Oryctolagus_cuniculus
ENSMODG00000018653	-	100	88.889	ENSORLG00000005266	polr2d	100	88.889	Oryzias_latipes
ENSMODG00000018653	-	100	88.889	ENSORLG00020006647	polr2d	100	88.889	Oryzias_latipes_hni
ENSMODG00000018653	-	100	88.889	ENSORLG00015003222	polr2d	100	88.889	Oryzias_latipes_hsok
ENSMODG00000018653	-	100	89.583	ENSOMEG00000018915	polr2d	100	89.583	Oryzias_melastigma
ENSMODG00000018653	-	100	96.528	ENSOGAG00000017118	POLR2D	100	96.528	Otolemur_garnettii
ENSMODG00000018653	-	100	97.183	ENSOARG00000015995	POLR2D	100	97.183	Ovis_aries
ENSMODG00000018653	-	100	98.592	ENSPPRG00000020222	POLR2D	100	98.592	Panthera_pardus
ENSMODG00000018653	-	100	98.592	ENSPTIG00000018618	POLR2D	100	98.592	Panthera_tigris_altaica
ENSMODG00000018653	-	100	98.592	ENSPTRG00000012436	POLR2D	100	98.592	Pan_troglodytes
ENSMODG00000018653	-	100	97.887	ENSPANG00000018602	POLR2D	100	97.887	Papio_anubis
ENSMODG00000018653	-	99	93.662	ENSPKIG00000012166	polr2d	99	93.662	Paramormyrops_kingsleyae
ENSMODG00000018653	-	83	100.000	ENSPSIG00000002873	POLR2D	100	100.000	Pelodiscus_sinensis
ENSMODG00000018653	-	100	98.592	ENSPEMG00000018244	Polr2d	100	98.592	Peromyscus_maniculatus_bairdii
ENSMODG00000018653	-	100	88.732	ENSPMAG00000005021	polr2d	99	88.732	Petromyzon_marinus
ENSMODG00000018653	-	100	92.361	ENSPFOG00000008969	polr2d	100	92.361	Poecilia_formosa
ENSMODG00000018653	-	100	92.361	ENSPLAG00000017210	polr2d	100	92.361	Poecilia_latipinna
ENSMODG00000018653	-	100	92.361	ENSPMEG00000005160	polr2d	100	92.361	Poecilia_mexicana
ENSMODG00000018653	-	73	96.154	ENSPREG00000021862	polr2d	100	96.154	Poecilia_reticulata
ENSMODG00000018653	-	100	98.592	ENSPPYG00000012759	POLR2D	100	98.592	Pongo_abelii
ENSMODG00000018653	-	100	97.887	ENSPCAG00000001396	POLR2D	100	97.887	Procavia_capensis
ENSMODG00000018653	-	100	97.887	ENSPCOG00000022076	POLR2D	100	97.887	Propithecus_coquereli
ENSMODG00000018653	-	100	97.887	ENSPVAG00000004002	POLR2D	100	97.887	Pteropus_vampyrus
ENSMODG00000018653	-	100	92.308	ENSPNAG00000018246	polr2d	100	92.308	Pygocentrus_nattereri
ENSMODG00000018653	-	100	98.592	ENSRNOG00000016231	Polr2d	100	98.592	Rattus_norvegicus
ENSMODG00000018653	-	100	98.592	ENSRBIG00000039326	POLR2D	100	98.592	Rhinopithecus_bieti
ENSMODG00000018653	-	100	98.592	ENSRROG00000023289	POLR2D	100	98.592	Rhinopithecus_roxellana
ENSMODG00000018653	-	100	99.296	ENSSHAG00000014817	-	100	99.296	Sarcophilus_harrisii
ENSMODG00000018653	-	92	96.947	ENSSFOG00015024204	polr2d	100	92.361	Scleropages_formosus
ENSMODG00000018653	-	100	91.667	ENSSDUG00000006060	polr2d	100	91.667	Seriola_dumerili
ENSMODG00000018653	-	95	94.074	ENSSLDG00000024485	polr2d	100	91.034	Seriola_lalandi_dorsalis
ENSMODG00000018653	-	82	98.291	ENSSARG00000009037	POLR2D	100	98.291	Sorex_araneus
ENSMODG00000018653	-	100	98.592	ENSSPUG00000014915	POLR2D	100	98.592	Sphenodon_punctatus
ENSMODG00000018653	-	100	91.667	ENSSPAG00000013386	polr2d	100	91.667	Stegastes_partitus
ENSMODG00000018653	-	100	98.592	ENSSSCG00000039230	POLR2D	100	98.592	Sus_scrofa
ENSMODG00000018653	-	100	98.592	ENSTGUG00000005773	POLR2D	99	98.592	Taeniopygia_guttata
ENSMODG00000018653	-	100	91.549	ENSTRUG00000004740	polr2d	100	91.549	Takifugu_rubripes
ENSMODG00000018653	-	99	92.908	ENSTNIG00000011210	polr2d	99	92.908	Tetraodon_nigroviridis
ENSMODG00000018653	-	82	99.145	ENSTBEG00000006081	POLR2D	100	99.145	Tupaia_belangeri
ENSMODG00000018653	-	82	99.145	ENSTTRG00000010055	POLR2D	100	99.145	Tursiops_truncatus
ENSMODG00000018653	-	92	97.692	ENSUAMG00000024374	POLR2D	98	97.692	Ursus_americanus
ENSMODG00000018653	-	98	88.489	ENSUMAG00000008280	POLR2D	100	99.038	Ursus_maritimus
ENSMODG00000018653	-	82	99.145	ENSVPAG00000007239	POLR2D	100	99.145	Vicugna_pacos
ENSMODG00000018653	-	100	98.592	ENSVVUG00000008616	POLR2D	100	98.592	Vulpes_vulpes
ENSMODG00000018653	-	100	91.549	ENSXETG00000002955	polr2d	100	91.549	Xenopus_tropicalis
ENSMODG00000018653	-	73	96.154	ENSXCOG00000012668	polr2d	100	96.154	Xiphophorus_couchianus
ENSMODG00000018653	-	73	96.154	ENSXMAG00000014031	polr2d	100	96.154	Xiphophorus_maculatus