EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSMODG00000018774 (Gene tree)
Gene ID: 100014457
Gene Symbol: PRPF3
Alias: Prp3|RP18|SNRNP90|hPrp3
Full Name: pre-mRNA processing factor 3
Gene Type: protein_coding
Species: Monodelphis_domestica
Status: putative
Strand: Plus strand
Length: 90564 bases
Position: chr2:495461315-495551878
Accession: 100014457
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMODP00000039613	PRP3	PF08572.10	5.9e-80	1	1
ENSMODP00000023409	PRP3	PF08572.10	6.6e-80	1	1
ENSMODP00000039613	PWI	PF01480.17	2.2e-13	1	1
ENSMODP00000023409	PWI	PF01480.17	2.4e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMODT00000042719	PRPF3-202	2597	XM_016429148	ENSMODP00000039613	645 (aa)	XP_016284634	K7E1G2
ENSMODT00000023825	PRPF3-201	2077	-	ENSMODP00000023409	683 (aa)	XP_001365661	F7ADZ9

Gene Model

Click here to download ENSMODG00000018774's gene model file

Pathways

Pathway ID	Pathway Name	Source
mdo03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMODG00000018774's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMODG00000018774	PRPF3	100	98.389	ENSG00000117360	PRPF3	100	98.389	Homo_sapiens
ENSMODG00000018774	PRPF3	100	72.034	ENSAPOG00000015584	prpf3	99	72.599	Acanthochromis_polyacanthus
ENSMODG00000018774	PRPF3	100	98.243	ENSAMEG00000001630	PRPF3	100	98.243	Ailuropoda_melanoleuca
ENSMODG00000018774	PRPF3	100	72.419	ENSACIG00000007876	prpf3	99	71.429	Amphilophus_citrinellus
ENSMODG00000018774	PRPF3	100	71.328	ENSAOCG00000011449	prpf3	99	72.546	Amphiprion_ocellaris
ENSMODG00000018774	PRPF3	100	71.225	ENSATEG00000023583	prpf3	99	71.652	Anabas_testudineus
ENSMODG00000018774	PRPF3	100	95.468	ENSAPLG00000002440	PRPF3	100	95.468	Anas_platyrhynchos
ENSMODG00000018774	PRPF3	100	92.140	ENSACAG00000003176	PRPF3	100	92.431	Anolis_carolinensis
ENSMODG00000018774	PRPF3	100	98.389	ENSANAG00000026138	PRPF3	100	98.389	Aotus_nancymaae
ENSMODG00000018774	PRPF3	100	72.793	ENSACLG00000020127	prpf3	99	72.504	Astatotilapia_calliptera
ENSMODG00000018774	PRPF3	100	74.225	ENSAMXG00000007306	prpf3	99	73.803	Astyanax_mexicanus
ENSMODG00000018774	PRPF3	100	98.389	ENSBTAG00000013946	PRPF3	100	98.389	Bos_taurus
ENSMODG00000018774	PRPF3	81	39.324	WBGene00010844	prp-3	82	39.464	Caenorhabditis_elegans
ENSMODG00000018774	PRPF3	100	98.389	ENSCJAG00000009926	PRPF3	100	98.389	Callithrix_jacchus
ENSMODG00000018774	PRPF3	100	98.389	ENSCAFG00000011820	PRPF3	100	98.389	Canis_familiaris
ENSMODG00000018774	PRPF3	85	98.537	ENSCAFG00020019653	PRPF3	100	98.537	Canis_lupus_dingo
ENSMODG00000018774	PRPF3	100	98.389	ENSCHIG00000015434	PRPF3	100	98.389	Capra_hircus
ENSMODG00000018774	PRPF3	100	97.950	ENSTSYG00000001383	PRPF3	100	97.950	Carlito_syrichta
ENSMODG00000018774	PRPF3	93	81.132	ENSCAPG00000017812	PRPF3	95	81.447	Cavia_aperea
ENSMODG00000018774	PRPF3	100	97.950	ENSCPOG00000008068	PRPF3	100	97.950	Cavia_porcellus
ENSMODG00000018774	PRPF3	100	98.389	ENSCCAG00000026380	PRPF3	100	98.389	Cebus_capucinus
ENSMODG00000018774	PRPF3	100	82.994	ENSCATG00000041778	PRPF3	100	82.994	Cercocebus_atys
ENSMODG00000018774	PRPF3	100	98.243	ENSCLAG00000015009	PRPF3	100	98.243	Chinchilla_lanigera
ENSMODG00000018774	PRPF3	77	98.765	ENSCHOG00000011645	PRPF3	77	98.765	Choloepus_hoffmanni
ENSMODG00000018774	PRPF3	100	96.491	ENSCPBG00000008216	PRPF3	100	96.491	Chrysemys_picta_bellii
ENSMODG00000018774	PRPF3	61	59.905	ENSCING00000003312	-	99	58.950	Ciona_intestinalis
ENSMODG00000018774	PRPF3	83	54.035	ENSCSAVG00000008720	-	94	54.792	Ciona_savignyi
ENSMODG00000018774	PRPF3	100	97.657	ENSCANG00000036769	PRPF3	100	97.657	Colobus_angolensis_palliatus
ENSMODG00000018774	PRPF3	100	98.389	ENSCGRG00001019100	Prpf3	100	98.389	Cricetulus_griseus_chok1gshd
ENSMODG00000018774	PRPF3	100	98.389	ENSCGRG00000007322	Prpf3	100	98.389	Cricetulus_griseus_crigri
ENSMODG00000018774	PRPF3	100	72.293	ENSCSEG00000002532	prpf3	99	70.886	Cynoglossus_semilaevis
ENSMODG00000018774	PRPF3	100	72.908	ENSCVAG00000009318	prpf3	99	72.624	Cyprinodon_variegatus
ENSMODG00000018774	PRPF3	100	73.229	ENSDARG00000086425	prpf3	99	72.546	Danio_rerio
ENSMODG00000018774	PRPF3	100	88.287	ENSDNOG00000005904	PRPF3	100	89.458	Dasypus_novemcinctus
ENSMODG00000018774	PRPF3	93	97.950	ENSDORG00000008664	Prpf3	100	97.950	Dipodomys_ordii
ENSMODG00000018774	PRPF3	81	53.086	FBgn0036915	Prp3	99	53.273	Drosophila_melanogaster
ENSMODG00000018774	PRPF3	100	97.365	ENSETEG00000019124	PRPF3	100	97.365	Echinops_telfairi
ENSMODG00000018774	PRPF3	100	64.344	ENSEBUG00000011680	prpf3	99	64.344	Eptatretus_burgeri
ENSMODG00000018774	PRPF3	100	98.243	ENSEASG00005001566	PRPF3	100	98.243	Equus_asinus_asinus
ENSMODG00000018774	PRPF3	100	98.389	ENSECAG00000019840	PRPF3	100	98.389	Equus_caballus
ENSMODG00000018774	PRPF3	85	99.291	ENSEEUG00000007338	PRPF3	85	99.291	Erinaceus_europaeus
ENSMODG00000018774	PRPF3	100	65.906	ENSELUG00000013624	prpf3	99	66.334	Esox_lucius
ENSMODG00000018774	PRPF3	100	98.389	ENSFCAG00000013940	PRPF3	100	98.389	Felis_catus
ENSMODG00000018774	PRPF3	100	97.804	ENSFDAG00000010365	PRPF3	100	97.804	Fukomys_damarensis
ENSMODG00000018774	PRPF3	100	73.420	ENSFHEG00000021746	prpf3	99	73.132	Fundulus_heteroclitus
ENSMODG00000018774	PRPF3	100	71.429	ENSGMOG00000008535	prpf3	99	71.287	Gadus_morhua
ENSMODG00000018774	PRPF3	100	95.322	ENSGALG00000028205	PRPF3	100	95.322	Gallus_gallus
ENSMODG00000018774	PRPF3	100	72.350	ENSGAFG00000012671	prpf3	99	72.063	Gambusia_affinis
ENSMODG00000018774	PRPF3	100	71.105	ENSGACG00000011792	prpf3	99	71.388	Gasterosteus_aculeatus
ENSMODG00000018774	PRPF3	100	96.199	ENSGAGG00000013765	PRPF3	100	95.993	Gopherus_agassizii
ENSMODG00000018774	PRPF3	86	98.780	ENSGGOG00000013174	PRPF3	100	98.780	Gorilla_gorilla
ENSMODG00000018774	PRPF3	100	72.688	ENSHBUG00000003493	prpf3	99	72.399	Haplochromis_burtoni
ENSMODG00000018774	PRPF3	100	97.950	ENSHGLG00000016569	PRPF3	100	97.950	Heterocephalus_glaber_female
ENSMODG00000018774	PRPF3	100	69.693	ENSHGLG00000016033	-	100	69.693	Heterocephalus_glaber_female
ENSMODG00000018774	PRPF3	100	97.950	ENSHGLG00100007590	PRPF3	100	97.950	Heterocephalus_glaber_male
ENSMODG00000018774	PRPF3	100	69.693	ENSHGLG00100008951	-	95	90.909	Heterocephalus_glaber_male
ENSMODG00000018774	PRPF3	100	68.848	ENSHCOG00000014058	prpf3	99	68.563	Hippocampus_comes
ENSMODG00000018774	PRPF3	100	73.429	ENSIPUG00000000902	PRPF3	99	73.752	Ictalurus_punctatus
ENSMODG00000018774	PRPF3	100	98.389	ENSSTOG00000001889	PRPF3	100	98.389	Ictidomys_tridecemlineatus
ENSMODG00000018774	PRPF3	100	71.165	ENSKMAG00000001390	prpf3	99	70.881	Kryptolebias_marmoratus
ENSMODG00000018774	PRPF3	100	70.687	ENSLBEG00000026310	prpf3	99	71.610	Labrus_bergylta
ENSMODG00000018774	PRPF3	95	82.410	ENSLACG00000010541	PRPF3	100	82.575	Latimeria_chalumnae
ENSMODG00000018774	PRPF3	100	98.389	ENSLAFG00000004713	PRPF3	100	98.389	Loxodonta_africana
ENSMODG00000018774	PRPF3	100	98.389	ENSMFAG00000039791	PRPF3	100	98.389	Macaca_fascicularis
ENSMODG00000018774	PRPF3	97	97.927	ENSMMUG00000016301	PRPF3	100	97.927	Macaca_mulatta
ENSMODG00000018774	PRPF3	100	98.389	ENSMNEG00000038161	PRPF3	100	98.389	Macaca_nemestrina
ENSMODG00000018774	PRPF3	99	66.224	ENSMLEG00000041065	-	98	65.147	Mandrillus_leucophaeus
ENSMODG00000018774	PRPF3	86	98.374	ENSMLEG00000040609	PRPF3	100	98.374	Mandrillus_leucophaeus
ENSMODG00000018774	PRPF3	100	71.955	ENSMAMG00000014968	prpf3	99	71.530	Mastacembelus_armatus
ENSMODG00000018774	PRPF3	100	70.646	ENSMZEG00005015970	prpf3	99	70.506	Maylandia_zebra
ENSMODG00000018774	PRPF3	100	95.322	ENSMGAG00000000707	PRPF3	100	95.322	Meleagris_gallopavo
ENSMODG00000018774	PRPF3	100	98.097	ENSMAUG00000017112	Prpf3	100	98.097	Mesocricetus_auratus
ENSMODG00000018774	PRPF3	100	98.097	ENSMICG00000015386	PRPF3	100	98.097	Microcebus_murinus
ENSMODG00000018774	PRPF3	100	98.243	ENSMOCG00000000242	Prpf3	100	98.243	Microtus_ochrogaster
ENSMODG00000018774	PRPF3	100	66.433	ENSMMOG00000016131	prpf3	99	67.422	Mola_mola
ENSMODG00000018774	PRPF3	100	70.513	ENSMALG00000007257	prpf3	99	70.513	Monopterus_albus
ENSMODG00000018774	PRPF3	100	97.950	MGP_CAROLIEiJ_G0025354	Prpf3	100	97.950	Mus_caroli
ENSMODG00000018774	PRPF3	100	97.950	ENSMUSG00000015748	Prpf3	100	97.950	Mus_musculus
ENSMODG00000018774	PRPF3	100	97.804	MGP_PahariEiJ_G0026798	Prpf3	100	97.804	Mus_pahari
ENSMODG00000018774	PRPF3	100	97.950	MGP_SPRETEiJ_G0026298	Prpf3	100	97.950	Mus_spretus
ENSMODG00000018774	PRPF3	100	95.461	ENSMPUG00000005080	PRPF3	100	95.461	Mustela_putorius_furo
ENSMODG00000018774	PRPF3	100	97.661	ENSMLUG00000004646	-	100	97.661	Myotis_lucifugus
ENSMODG00000018774	PRPF3	100	98.389	ENSNGAG00000000910	Prpf3	100	98.389	Nannospalax_galili
ENSMODG00000018774	PRPF3	100	70.490	ENSNBRG00000003462	prpf3	99	70.210	Neolamprologus_brichardi
ENSMODG00000018774	PRPF3	95	98.534	ENSNLEG00000009841	PRPF3	100	98.534	Nomascus_leucogenys
ENSMODG00000018774	PRPF3	83	100.000	ENSMEUG00000008733	PRPF3	89	100.000	Notamacropus_eugenii
ENSMODG00000018774	PRPF3	100	97.804	ENSOPRG00000010139	PRPF3	100	97.804	Ochotona_princeps
ENSMODG00000018774	PRPF3	100	97.657	ENSODEG00000011363	-	100	97.657	Octodon_degus
ENSMODG00000018774	PRPF3	100	72.464	ENSODEG00000014412	-	100	72.464	Octodon_degus
ENSMODG00000018774	PRPF3	100	70.787	ENSONIG00000006394	prpf3	99	70.646	Oreochromis_niloticus
ENSMODG00000018774	PRPF3	100	65.173	ENSOANG00000015441	PRPF3	100	64.826	Ornithorhynchus_anatinus
ENSMODG00000018774	PRPF3	100	98.389	ENSOCUG00000011760	PRPF3	100	98.389	Oryctolagus_cuniculus
ENSMODG00000018774	PRPF3	100	73.115	ENSORLG00000010330	prpf3	99	72.262	Oryzias_latipes
ENSMODG00000018774	PRPF3	100	73.115	ENSORLG00020009054	prpf3	99	72.262	Oryzias_latipes_hni
ENSMODG00000018774	PRPF3	100	72.831	ENSORLG00015015016	prpf3	99	71.977	Oryzias_latipes_hsok
ENSMODG00000018774	PRPF3	100	72.246	ENSOMEG00000000940	prpf3	99	71.960	Oryzias_melastigma
ENSMODG00000018774	PRPF3	100	92.836	ENSOGAG00000005352	PRPF3	100	92.836	Otolemur_garnettii
ENSMODG00000018774	PRPF3	100	98.389	ENSOARG00000020798	PRPF3	100	98.389	Ovis_aries
ENSMODG00000018774	PRPF3	100	98.243	ENSPPAG00000030983	PRPF3	100	98.243	Pan_paniscus
ENSMODG00000018774	PRPF3	99	74.777	ENSPPAG00000043769	-	99	74.332	Pan_paniscus
ENSMODG00000018774	PRPF3	100	98.389	ENSPPRG00000000731	PRPF3	100	98.389	Panthera_pardus
ENSMODG00000018774	PRPF3	100	98.389	ENSPTIG00000005516	PRPF3	100	98.389	Panthera_tigris_altaica
ENSMODG00000018774	PRPF3	100	98.389	ENSPTRG00000001254	PRPF3	100	98.389	Pan_troglodytes
ENSMODG00000018774	PRPF3	99	73.887	ENSPTRG00000047819	-	99	73.442	Pan_troglodytes
ENSMODG00000018774	PRPF3	100	98.243	ENSPANG00000000499	PRPF3	100	98.243	Papio_anubis
ENSMODG00000018774	PRPF3	100	74.322	ENSPKIG00000010501	prpf3	99	74.465	Paramormyrops_kingsleyae
ENSMODG00000018774	PRPF3	100	96.345	ENSPSIG00000014877	PRPF3	100	96.345	Pelodiscus_sinensis
ENSMODG00000018774	PRPF3	100	67.583	ENSPMGG00000007776	prpf3	99	66.860	Periophthalmus_magnuspinnatus
ENSMODG00000018774	PRPF3	100	98.389	ENSPEMG00000011672	Prpf3	100	98.389	Peromyscus_maniculatus_bairdii
ENSMODG00000018774	PRPF3	63	72.374	ENSPMAG00000005588	prpf3	99	69.978	Petromyzon_marinus
ENSMODG00000018774	PRPF3	100	100.000	ENSPCIG00000008795	PRPF3	100	100.000	Phascolarctos_cinereus
ENSMODG00000018774	PRPF3	100	72.560	ENSPFOG00000013638	prpf3	99	72.316	Poecilia_formosa
ENSMODG00000018774	PRPF3	100	72.818	ENSPLAG00000018103	prpf3	99	72.199	Poecilia_latipinna
ENSMODG00000018774	PRPF3	100	72.675	ENSPMEG00000023546	prpf3	99	72.389	Poecilia_mexicana
ENSMODG00000018774	PRPF3	100	72.286	ENSPREG00000017216	prpf3	99	72.000	Poecilia_reticulata
ENSMODG00000018774	PRPF3	95	98.534	ENSPPYG00000000900	PRPF3	99	98.268	Pongo_abelii
ENSMODG00000018774	PRPF3	80	85.992	ENSPPYG00000018646	-	100	85.992	Pongo_abelii
ENSMODG00000018774	PRPF3	87	97.462	ENSPCAG00000014908	PRPF3	87	97.462	Procavia_capensis
ENSMODG00000018774	PRPF3	100	98.243	ENSPCOG00000013828	PRPF3	100	98.243	Propithecus_coquereli
ENSMODG00000018774	PRPF3	100	97.511	ENSPVAG00000013472	PRPF3	100	97.511	Pteropus_vampyrus
ENSMODG00000018774	PRPF3	100	72.688	ENSPNYG00000004279	prpf3	99	72.399	Pundamilia_nyererei
ENSMODG00000018774	PRPF3	100	73.239	ENSPNAG00000001799	prpf3	99	73.380	Pygocentrus_nattereri
ENSMODG00000018774	PRPF3	100	97.804	ENSRNOG00000025629	Prpf3	100	97.804	Rattus_norvegicus
ENSMODG00000018774	PRPF3	83	94.326	ENSRBIG00000028854	PRPF3	98	94.326	Rhinopithecus_bieti
ENSMODG00000018774	PRPF3	100	98.389	ENSRROG00000027464	PRPF3	100	98.389	Rhinopithecus_roxellana
ENSMODG00000018774	PRPF3	100	91.508	ENSSBOG00000033104	PRPF3	93	98.936	Saimiri_boliviensis_boliviensis
ENSMODG00000018774	PRPF3	100	99.561	ENSSHAG00000009548	PRPF3	100	99.561	Sarcophilus_harrisii
ENSMODG00000018774	PRPF3	100	73.662	ENSSFOG00015022014	prpf3	99	73.239	Scleropages_formosus
ENSMODG00000018774	PRPF3	100	72.090	ENSSMAG00000015739	prpf3	99	71.809	Scophthalmus_maximus
ENSMODG00000018774	PRPF3	100	69.154	ENSSDUG00000006840	prpf3	99	69.154	Seriola_dumerili
ENSMODG00000018774	PRPF3	100	70.909	ENSSLDG00000015423	prpf3	99	71.189	Seriola_lalandi_dorsalis
ENSMODG00000018774	PRPF3	100	98.243	ENSSARG00000011064	PRPF3	100	98.243	Sorex_araneus
ENSMODG00000018774	PRPF3	100	92.219	ENSSPUG00000000809	PRPF3	100	92.219	Sphenodon_punctatus
ENSMODG00000018774	PRPF3	100	71.348	ENSSPAG00000018721	prpf3	99	72.277	Stegastes_partitus
ENSMODG00000018774	PRPF3	100	98.389	ENSSSCG00000030119	PRPF3	100	98.389	Sus_scrofa
ENSMODG00000018774	PRPF3	100	81.168	ENSTGUG00000004552	PRPF3	100	81.168	Taeniopygia_guttata
ENSMODG00000018774	PRPF3	100	72.294	ENSTRUG00000014923	prpf3	99	72.006	Takifugu_rubripes
ENSMODG00000018774	PRPF3	100	72.340	ENSTNIG00000008058	prpf3	100	71.165	Tetraodon_nigroviridis
ENSMODG00000018774	PRPF3	82	100.000	ENSTBEG00000014072	PRPF3	88	100.000	Tupaia_belangeri
ENSMODG00000018774	PRPF3	100	92.094	ENSTTRG00000010616	PRPF3	100	92.094	Tursiops_truncatus
ENSMODG00000018774	PRPF3	80	97.993	ENSUAMG00000009345	PRPF3	100	97.993	Ursus_americanus
ENSMODG00000018774	PRPF3	100	98.389	ENSUMAG00000003720	PRPF3	100	98.389	Ursus_maritimus
ENSMODG00000018774	PRPF3	89	100.000	ENSVPAG00000005425	PRPF3	89	100.000	Vicugna_pacos
ENSMODG00000018774	PRPF3	100	98.389	ENSVVUG00000007933	PRPF3	100	98.389	Vulpes_vulpes
ENSMODG00000018774	PRPF3	100	87.373	ENSXETG00000018654	prpf3	100	87.373	Xenopus_tropicalis
ENSMODG00000018774	PRPF3	100	72.532	ENSXMAG00000016347	prpf3	99	71.915	Xiphophorus_maculatus