EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMODG00000018942 (Gene tree)
Gene ID: 100011479
Gene Symbol: PRDM5
Alias: PFM2
Full Name: PR/SET domain 5
Gene Type: protein_coding
Species: Monodelphis_domestica
Status: putative
Strand: Plus strand
Length: 270395 bases
Position: chr5:8968535-9238929
Accession: 100011479
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMODP00000023632	zf-C2H2	PF00096.26	5e-68	1	12
ENSMODP00000023632	zf-C2H2	PF00096.26	5e-68	2	12
ENSMODP00000023632	zf-C2H2	PF00096.26	5e-68	3	12
ENSMODP00000023632	zf-C2H2	PF00096.26	5e-68	4	12
ENSMODP00000023632	zf-C2H2	PF00096.26	5e-68	5	12
ENSMODP00000023632	zf-C2H2	PF00096.26	5e-68	6	12
ENSMODP00000023632	zf-C2H2	PF00096.26	5e-68	7	12
ENSMODP00000023632	zf-C2H2	PF00096.26	5e-68	8	12
ENSMODP00000023632	zf-C2H2	PF00096.26	5e-68	9	12
ENSMODP00000023632	zf-C2H2	PF00096.26	5e-68	10	12
ENSMODP00000023632	zf-C2H2	PF00096.26	5e-68	11	12
ENSMODP00000023632	zf-C2H2	PF00096.26	5e-68	12	12
ENSMODP00000023632	zf-met	PF12874.7	1.2e-25	1	5
ENSMODP00000023632	zf-met	PF12874.7	1.2e-25	2	5
ENSMODP00000023632	zf-met	PF12874.7	1.2e-25	3	5
ENSMODP00000023632	zf-met	PF12874.7	1.2e-25	4	5
ENSMODP00000023632	zf-met	PF12874.7	1.2e-25	5	5
ENSMODP00000023632	zf-C2H2_jaz	PF12171.8	2e-30	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMODT00000024052	PRDM5-201	2324	XM_003341364	ENSMODP00000023632	632 (aa)	XP_003341412	F7GB24

Gene Model

Click here to download ENSMODG00000018942's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMODG00000018942's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMODG00000018942	PRDM5	72	35.450	ENSMODG00000019345	-	82	35.450
ENSMODG00000018942	PRDM5	75	34.200	ENSMODG00000006238	GZF1	99	34.468
ENSMODG00000018942	PRDM5	73	40.782	ENSMODG00000018622	-	98	40.782
ENSMODG00000018942	PRDM5	64	33.673	ENSMODG00000014052	-	99	33.673
ENSMODG00000018942	PRDM5	69	35.797	ENSMODG00000024585	-	77	35.797
ENSMODG00000018942	PRDM5	81	34.554	ENSMODG00000010532	-	85	35.294
ENSMODG00000018942	PRDM5	73	38.908	ENSMODG00000008516	-	100	38.908
ENSMODG00000018942	PRDM5	74	39.220	ENSMODG00000001880	-	80	39.220

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMODG00000018942	PRDM5	100	80.222	ENSG00000138738	PRDM5	100	80.411	Homo_sapiens
ENSMODG00000018942	PRDM5	100	78.199	ENSAPOG00000023220	prdm5	100	77.409	Acanthochromis_polyacanthus
ENSMODG00000018942	PRDM5	91	74.611	ENSAMEG00000003050	PRDM5	100	74.957	Ailuropoda_melanoleuca
ENSMODG00000018942	PRDM5	100	77.093	ENSACIG00000000406	prdm5	100	76.145	Amphilophus_citrinellus
ENSMODG00000018942	PRDM5	100	78.989	ENSAOCG00000014806	prdm5	100	78.989	Amphiprion_ocellaris
ENSMODG00000018942	PRDM5	100	70.336	ENSAPEG00000016846	prdm5	100	71.560	Amphiprion_percula
ENSMODG00000018942	PRDM5	100	80.915	ENSATEG00000013829	prdm5	99	80.915	Anabas_testudineus
ENSMODG00000018942	PRDM5	95	85.904	ENSAPLG00000013828	PRDM5	100	85.904	Anas_platyrhynchos
ENSMODG00000018942	PRDM5	100	80.727	ENSACAG00000012999	PRDM5	100	80.885	Anolis_carolinensis
ENSMODG00000018942	PRDM5	100	89.333	ENSANAG00000027411	PRDM5	100	89.333	Aotus_nancymaae
ENSMODG00000018942	PRDM5	100	79.147	ENSACLG00000017996	prdm5	100	78.357	Astatotilapia_calliptera
ENSMODG00000018942	PRDM5	85	80.334	ENSAMXG00000041864	prdm5	99	79.406	Astyanax_mexicanus
ENSMODG00000018942	PRDM5	100	80.411	ENSBTAG00000012111	PRDM5	100	80.411	Bos_taurus
ENSMODG00000018942	PRDM5	100	88.667	ENSCJAG00000003133	PRDM5	100	88.667	Callithrix_jacchus
ENSMODG00000018942	PRDM5	92	72.260	ENSCAFG00000004179	PRDM5	99	72.289	Canis_familiaris
ENSMODG00000018942	PRDM5	100	80.569	ENSCAFG00020017685	PRDM5	100	80.569	Canis_lupus_dingo
ENSMODG00000018942	PRDM5	100	79.589	ENSCHIG00000018772	PRDM5	100	79.589	Capra_hircus
ENSMODG00000018942	PRDM5	95	78.650	ENSTSYG00000009630	PRDM5	95	78.611	Carlito_syrichta
ENSMODG00000018942	PRDM5	91	88.667	ENSCAPG00000015217	PRDM5	100	88.667	Cavia_aperea
ENSMODG00000018942	PRDM5	95	88.291	ENSCPOG00000012883	PRDM5	100	88.667	Cavia_porcellus
ENSMODG00000018942	PRDM5	100	89.333	ENSCCAG00000023157	PRDM5	100	89.333	Cebus_capucinus
ENSMODG00000018942	PRDM5	100	89.333	ENSCATG00000042510	PRDM5	100	89.333	Cercocebus_atys
ENSMODG00000018942	PRDM5	95	88.291	ENSCLAG00000005392	PRDM5	100	88.667	Chinchilla_lanigera
ENSMODG00000018942	PRDM5	100	77.848	ENSCSAG00000003729	PRDM5	100	78.041	Chlorocebus_sabaeus
ENSMODG00000018942	PRDM5	99	79.021	ENSCHOG00000007801	PRDM5	91	79.021	Choloepus_hoffmanni
ENSMODG00000018942	PRDM5	100	84.399	ENSCPBG00000024735	PRDM5	100	85.133	Chrysemys_picta_bellii
ENSMODG00000018942	PRDM5	100	89.333	ENSCANG00000036807	PRDM5	100	89.333	Colobus_angolensis_palliatus
ENSMODG00000018942	PRDM5	100	90.667	ENSCGRG00001010581	Prdm5	100	90.667	Cricetulus_griseus_chok1gshd
ENSMODG00000018942	PRDM5	95	70.100	ENSCGRG00000010996	-	99	70.100	Cricetulus_griseus_crigri
ENSMODG00000018942	PRDM5	100	78.673	ENSCSEG00000019979	prdm5	100	78.425	Cynoglossus_semilaevis
ENSMODG00000018942	PRDM5	100	76.777	ENSCVAG00000013692	prdm5	100	75.829	Cyprinodon_variegatus
ENSMODG00000018942	PRDM5	100	78.336	ENSDARG00000006288	prdm5	100	79.022	Danio_rerio
ENSMODG00000018942	PRDM5	91	79.585	ENSDNOG00000002009	PRDM5	100	79.585	Dasypus_novemcinctus
ENSMODG00000018942	PRDM5	100	87.975	ENSDORG00000007739	Prdm5	100	82.319	Dipodomys_ordii
ENSMODG00000018942	PRDM5	94	68.800	ENSETEG00000020268	PRDM5	85	79.381	Echinops_telfairi
ENSMODG00000018942	PRDM5	99	70.032	ENSEBUG00000004301	prdm5	100	69.874	Eptatretus_burgeri
ENSMODG00000018942	PRDM5	100	90.000	ENSEASG00005018365	PRDM5	100	90.000	Equus_asinus_asinus
ENSMODG00000018942	PRDM5	99	79.159	ENSECAG00000011516	PRDM5	90	79.159	Equus_caballus
ENSMODG00000018942	PRDM5	100	76.852	ENSECAG00000024747	-	100	76.852	Equus_caballus
ENSMODG00000018942	PRDM5	99	74.913	ENSEEUG00000010306	PRDM5	100	74.913	Erinaceus_europaeus
ENSMODG00000018942	PRDM5	99	78.650	ENSELUG00000005894	prdm5	93	78.388	Esox_lucius
ENSMODG00000018942	PRDM5	100	80.411	ENSFCAG00000025656	PRDM5	100	80.411	Felis_catus
ENSMODG00000018942	PRDM5	99	75.767	ENSFALG00000008381	PRDM5	100	77.019	Ficedula_albicollis
ENSMODG00000018942	PRDM5	100	88.667	ENSFDAG00000021361	PRDM5	100	88.667	Fukomys_damarensis
ENSMODG00000018942	PRDM5	100	79.147	ENSFHEG00000013040	prdm5	100	79.147	Fundulus_heteroclitus
ENSMODG00000018942	PRDM5	100	75.000	ENSGMOG00000012038	prdm5	100	75.000	Gadus_morhua
ENSMODG00000018942	PRDM5	100	85.624	ENSGALG00000011963	PRDM5	100	85.624	Gallus_gallus
ENSMODG00000018942	PRDM5	99	79.450	ENSGAFG00000019233	prdm5	95	79.450	Gambusia_affinis
ENSMODG00000018942	PRDM5	99	82.061	ENSGAGG00000020362	PRDM5	99	82.824	Gopherus_agassizii
ENSMODG00000018942	PRDM5	100	89.333	ENSGGOG00000013562	PRDM5	100	89.333	Gorilla_gorilla
ENSMODG00000018942	PRDM5	100	78.831	ENSHBUG00000023375	prdm5	100	78.041	Haplochromis_burtoni
ENSMODG00000018942	PRDM5	100	75.316	ENSHGLG00000003010	PRDM5	100	75.362	Heterocephalus_glaber_female
ENSMODG00000018942	PRDM5	100	88.924	ENSHGLG00100003696	PRDM5	100	88.667	Heterocephalus_glaber_male
ENSMODG00000018942	PRDM5	100	80.284	ENSHCOG00000012131	prdm5	100	80.284	Hippocampus_comes
ENSMODG00000018942	PRDM5	100	81.073	ENSIPUG00000001248	prdm5	99	81.073	Ictalurus_punctatus
ENSMODG00000018942	PRDM5	95	86.392	ENSSTOG00000004741	PRDM5	100	87.333	Ictidomys_tridecemlineatus
ENSMODG00000018942	PRDM5	95	88.608	ENSJJAG00000011464	Prdm5	100	88.667	Jaculus_jaculus
ENSMODG00000018942	PRDM5	100	79.147	ENSKMAG00000013663	prdm5	100	79.147	Kryptolebias_marmoratus
ENSMODG00000018942	PRDM5	100	80.885	ENSLBEG00000022736	prdm5	100	80.095	Labrus_bergylta
ENSMODG00000018942	PRDM5	92	82.444	ENSLACG00000009187	PRDM5	100	82.616	Latimeria_chalumnae
ENSMODG00000018942	PRDM5	100	82.306	ENSLOCG00000009778	prdm5	99	82.148	Lepisosteus_oculatus
ENSMODG00000018942	PRDM5	100	77.567	ENSLAFG00000006532	PRDM5	99	83.544	Loxodonta_africana
ENSMODG00000018942	PRDM5	100	89.333	ENSMFAG00000045845	PRDM5	100	89.333	Macaca_fascicularis
ENSMODG00000018942	PRDM5	100	89.333	ENSMMUG00000003249	PRDM5	100	89.333	Macaca_mulatta
ENSMODG00000018942	PRDM5	100	89.333	ENSMNEG00000019018	PRDM5	100	89.333	Macaca_nemestrina
ENSMODG00000018942	PRDM5	99	76.789	ENSMLEG00000023145	PRDM5	100	79.568	Mandrillus_leucophaeus
ENSMODG00000018942	PRDM5	100	79.495	ENSMAMG00000013419	prdm5	100	79.653	Mastacembelus_armatus
ENSMODG00000018942	PRDM5	100	78.831	ENSMZEG00005020645	prdm5	100	78.041	Maylandia_zebra
ENSMODG00000018942	PRDM5	95	85.216	ENSMGAG00000010710	PRDM5	100	85.216	Meleagris_gallopavo
ENSMODG00000018942	PRDM5	100	90.667	ENSMAUG00000006768	Prdm5	100	90.667	Mesocricetus_auratus
ENSMODG00000018942	PRDM5	100	88.667	ENSMICG00000001459	PRDM5	100	88.667	Microcebus_murinus
ENSMODG00000018942	PRDM5	100	90.667	ENSMOCG00000016267	Prdm5	100	90.667	Microtus_ochrogaster
ENSMODG00000018942	PRDM5	100	78.515	ENSMMOG00000006035	prdm5	100	77.725	Mola_mola
ENSMODG00000018942	PRDM5	100	76.145	ENSMALG00000013934	prdm5	100	75.671	Monopterus_albus
ENSMODG00000018942	PRDM5	100	90.000	MGP_CAROLIEiJ_G0028463	Prdm5	100	90.000	Mus_caroli
ENSMODG00000018942	PRDM5	100	90.000	ENSMUSG00000029913	Prdm5	100	90.000	Mus_musculus
ENSMODG00000018942	PRDM5	100	90.000	MGP_PahariEiJ_G0022203	Prdm5	100	90.000	Mus_pahari
ENSMODG00000018942	PRDM5	100	90.000	MGP_SPRETEiJ_G0029467	Prdm5	100	90.000	Mus_spretus
ENSMODG00000018942	PRDM5	100	79.463	ENSMPUG00000017415	PRDM5	100	79.463	Mustela_putorius_furo
ENSMODG00000018942	PRDM5	91	72.931	ENSMLUG00000006097	PRDM5	100	72.931	Myotis_lucifugus
ENSMODG00000018942	PRDM5	100	90.000	ENSNGAG00000018317	Prdm5	100	90.000	Nannospalax_galili
ENSMODG00000018942	PRDM5	100	70.717	ENSNBRG00000004976	prdm5	100	74.331	Neolamprologus_brichardi
ENSMODG00000018942	PRDM5	100	89.333	ENSNLEG00000009107	PRDM5	100	89.333	Nomascus_leucogenys
ENSMODG00000018942	PRDM5	84	93.220	ENSMEUG00000006576	-	71	93.220	Notamacropus_eugenii
ENSMODG00000018942	PRDM5	95	62.190	ENSOPRG00000011066	-	89	62.190	Ochotona_princeps
ENSMODG00000018942	PRDM5	99	88.667	ENSODEG00000009133	PRDM5	100	88.667	Octodon_degus
ENSMODG00000018942	PRDM5	100	81.043	ENSONIG00000003111	prdm5	99	81.043	Oreochromis_niloticus
ENSMODG00000018942	PRDM5	99	76.789	ENSOANG00000015109	PRDM5	97	76.789	Ornithorhynchus_anatinus
ENSMODG00000018942	PRDM5	53	93.333	ENSOANG00000006197	-	100	93.333	Ornithorhynchus_anatinus
ENSMODG00000018942	PRDM5	93	73.559	ENSOCUG00000013454	PRDM5	100	74.407	Oryctolagus_cuniculus
ENSMODG00000018942	PRDM5	100	78.515	ENSORLG00000016247	prdm5	100	78.199	Oryzias_latipes
ENSMODG00000018942	PRDM5	100	78.673	ENSORLG00020018051	prdm5	100	78.831	Oryzias_latipes_hni
ENSMODG00000018942	PRDM5	100	78.515	ENSORLG00015013760	prdm5	100	78.199	Oryzias_latipes_hsok
ENSMODG00000018942	PRDM5	100	78.391	ENSOMEG00000005143	prdm5	100	77.918	Oryzias_melastigma
ENSMODG00000018942	PRDM5	84	73.034	ENSOGAG00000009996	PRDM5	98	72.677	Otolemur_garnettii
ENSMODG00000018942	PRDM5	95	78.040	ENSOARG00000015473	PRDM5	100	77.391	Ovis_aries
ENSMODG00000018942	PRDM5	99	77.143	ENSPPAG00000043045	PRDM5	100	79.492	Pan_paniscus
ENSMODG00000018942	PRDM5	100	80.411	ENSPPRG00000001020	PRDM5	100	80.411	Panthera_pardus
ENSMODG00000018942	PRDM5	95	79.568	ENSPTIG00000010807	PRDM5	95	79.568	Panthera_tigris_altaica
ENSMODG00000018942	PRDM5	100	89.333	ENSPTRG00000016403	PRDM5	100	89.333	Pan_troglodytes
ENSMODG00000018942	PRDM5	100	89.333	ENSPANG00000023612	PRDM5	100	89.333	Papio_anubis
ENSMODG00000018942	PRDM5	100	54.159	ENSPKIG00000015492	prdm5	100	58.044	Paramormyrops_kingsleyae
ENSMODG00000018942	PRDM5	100	86.006	ENSPSIG00000013505	PRDM5	100	86.142	Pelodiscus_sinensis
ENSMODG00000018942	PRDM5	100	77.251	ENSPMGG00000012622	prdm5	100	76.461	Periophthalmus_magnuspinnatus
ENSMODG00000018942	PRDM5	74	72.330	ENSPMAG00000005248	prdm5	100	73.544	Petromyzon_marinus
ENSMODG00000018942	PRDM5	99	70.516	ENSPFOG00000018630	prdm5	99	70.516	Poecilia_formosa
ENSMODG00000018942	PRDM5	100	80.885	ENSPLAG00000014148	prdm5	100	79.779	Poecilia_latipinna
ENSMODG00000018942	PRDM5	100	79.463	ENSPMEG00000018002	prdm5	100	78.357	Poecilia_mexicana
ENSMODG00000018942	PRDM5	100	79.463	ENSPREG00000018366	prdm5	100	78.357	Poecilia_reticulata
ENSMODG00000018942	PRDM5	100	80.222	ENSPPYG00000015031	PRDM5	100	80.222	Pongo_abelii
ENSMODG00000018942	PRDM5	95	74.419	ENSPCAG00000011671	PRDM5	100	74.419	Procavia_capensis
ENSMODG00000018942	PRDM5	100	88.667	ENSPCOG00000022828	PRDM5	100	88.667	Propithecus_coquereli
ENSMODG00000018942	PRDM5	95	75.622	ENSPVAG00000012309	PRDM5	100	75.622	Pteropus_vampyrus
ENSMODG00000018942	PRDM5	100	78.989	ENSPNYG00000012194	prdm5	100	78.199	Pundamilia_nyererei
ENSMODG00000018942	PRDM5	100	78.650	ENSPNAG00000026181	prdm5	100	78.145	Pygocentrus_nattereri
ENSMODG00000018942	PRDM5	93	76.481	ENSPNAG00000023191	-	100	76.481	Pygocentrus_nattereri
ENSMODG00000018942	PRDM5	99	74.068	ENSRNOG00000023679	Prdm5	99	74.068	Rattus_norvegicus
ENSMODG00000018942	PRDM5	100	89.333	ENSRBIG00000041307	PRDM5	100	89.333	Rhinopithecus_bieti
ENSMODG00000018942	PRDM5	95	64.286	ENSRROG00000035343	PRDM5	100	71.761	Rhinopithecus_roxellana
ENSMODG00000018942	PRDM5	100	89.333	ENSSBOG00000022100	PRDM5	100	89.333	Saimiri_boliviensis_boliviensis
ENSMODG00000018942	PRDM5	91	93.033	ENSSHAG00000003250	PRDM5	100	93.033	Sarcophilus_harrisii
ENSMODG00000018942	PRDM5	100	76.619	ENSSFOG00015020478	prdm5	100	75.671	Scleropages_formosus
ENSMODG00000018942	PRDM5	100	81.260	ENSSMAG00000018844	prdm5	99	81.073	Scophthalmus_maximus
ENSMODG00000018942	PRDM5	100	79.463	ENSSDUG00000020397	prdm5	100	78.515	Seriola_dumerili
ENSMODG00000018942	PRDM5	100	79.463	ENSSLDG00000013353	prdm5	100	78.515	Seriola_lalandi_dorsalis
ENSMODG00000018942	PRDM5	90	88.034	ENSSARG00000014129	-	65	88.034	Sorex_araneus
ENSMODG00000018942	PRDM5	100	94.000	ENSSPUG00000009941	PRDM5	100	94.000	Sphenodon_punctatus
ENSMODG00000018942	PRDM5	100	81.201	ENSSPAG00000013866	prdm5	100	80.253	Stegastes_partitus
ENSMODG00000018942	PRDM5	100	81.043	ENSSSCG00000009101	PRDM5	100	81.043	Sus_scrofa
ENSMODG00000018942	PRDM5	95	85.857	ENSTGUG00000001920	PRDM5	100	85.857	Taeniopygia_guttata
ENSMODG00000018942	PRDM5	100	78.041	ENSTRUG00000013850	prdm5	100	78.268	Takifugu_rubripes
ENSMODG00000018942	PRDM5	100	66.088	ENSTNIG00000005901	prdm5	100	66.088	Tetraodon_nigroviridis
ENSMODG00000018942	PRDM5	95	71.662	ENSTBEG00000015386	PRDM5	86	71.662	Tupaia_belangeri
ENSMODG00000018942	PRDM5	100	80.253	ENSTTRG00000010996	PRDM5	100	80.253	Tursiops_truncatus
ENSMODG00000018942	PRDM5	95	88.034	ENSUAMG00000009994	PRDM5	76	88.034	Ursus_americanus
ENSMODG00000018942	PRDM5	95	89.557	ENSUMAG00000003733	PRDM5	99	83.768	Ursus_maritimus
ENSMODG00000018942	PRDM5	97	70.894	ENSVPAG00000007435	PRDM5	100	70.894	Vicugna_pacos
ENSMODG00000018942	PRDM5	93	79.492	ENSVVUG00000013192	PRDM5	100	79.492	Vulpes_vulpes
ENSMODG00000018942	PRDM5	100	79.430	ENSXETG00000002101	prdm5	100	79.430	Xenopus_tropicalis
ENSMODG00000018942	PRDM5	100	79.147	ENSXCOG00000008567	prdm5	100	78.357	Xiphophorus_couchianus
ENSMODG00000018942	PRDM5	100	79.147	ENSXMAG00000013825	prdm5	100	78.357	Xiphophorus_maculatus