EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMODG00000019271 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Monodelphis_domestica
Status: putative
Strand: Minus strand
Length: 1215 bases
Position: chr3:1530373-1531587
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMODP00000024054	RRM_1	PF00076.22	2.6e-11	1	1
ENSMODP00000024054	RRM_3	PF08777.11	1.3e-30	1	1
ENSMODP00000024054	La	PF05383.17	1.8e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMODT00000024481	-	1038	-	ENSMODP00000024054	345 (aa)	-	F6SI25

Gene Model

Click here to download ENSMODG00000019271's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMODG00000019271's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMODG00000019271	-	100	76.773	ENSMODG00000008227	-	100	76.039
ENSMODG00000019271	-	100	91.040	ENSMODG00000007027	-	100	91.040

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMODG00000019271	-	100	67.402	ENSG00000138385	SSB	90	84.259	Homo_sapiens
ENSMODG00000019271	-	99	46.914	ENSAPOG00000003448	ssb	96	49.194	Acanthochromis_polyacanthus
ENSMODG00000019271	-	100	65.000	ENSAMEG00000010507	SSB	100	64.762	Ailuropoda_melanoleuca
ENSMODG00000019271	-	91	48.118	ENSACIG00000001738	ssb	88	59.350	Amphilophus_citrinellus
ENSMODG00000019271	-	99	46.914	ENSAOCG00000020398	ssb	96	39.946	Amphiprion_ocellaris
ENSMODG00000019271	-	99	47.160	ENSAPEG00000020395	ssb	96	40.214	Amphiprion_percula
ENSMODG00000019271	-	99	48.889	ENSATEG00000016884	ssb	100	48.889	Anabas_testudineus
ENSMODG00000019271	-	99	77.987	ENSAPLG00000006109	SSB	85	77.987	Anas_platyrhynchos
ENSMODG00000019271	-	99	73.585	ENSACAG00000017008	SSB	85	73.585	Anolis_carolinensis
ENSMODG00000019271	-	100	63.889	ENSANAG00000027195	-	100	61.869	Aotus_nancymaae
ENSMODG00000019271	-	99	45.658	ENSACLG00000010798	ssb	100	45.161	Astatotilapia_calliptera
ENSMODG00000019271	-	98	46.683	ENSAMXG00000012606	ssb	92	48.421	Astyanax_mexicanus
ENSMODG00000019271	-	100	52.798	ENSBTAG00000008716	SSB	100	52.555	Bos_taurus
ENSMODG00000019271	-	100	66.914	ENSCJAG00000045073	SSB	85	82.609	Callithrix_jacchus
ENSMODG00000019271	-	100	67.734	ENSCAFG00000012418	SSB	100	67.488	Canis_familiaris
ENSMODG00000019271	-	100	67.734	ENSCAFG00020002900	SSB	100	67.488	Canis_lupus_dingo
ENSMODG00000019271	-	100	49.148	ENSCHIG00000022196	-	100	49.148	Capra_hircus
ENSMODG00000019271	-	100	53.041	ENSCHIG00000022624	-	100	53.285	Capra_hircus
ENSMODG00000019271	-	100	71.907	ENSTSYG00000000097	SSB	100	71.907	Carlito_syrichta
ENSMODG00000019271	-	100	70.960	ENSCPOG00000003338	SSB	100	70.960	Cavia_porcellus
ENSMODG00000019271	-	100	67.654	ENSCCAG00000035147	SSB	86	82.609	Cebus_capucinus
ENSMODG00000019271	-	74	56.707	ENSCATG00000036701	SSB	93	56.707	Cercocebus_atys
ENSMODG00000019271	-	100	61.003	ENSCATG00000042909	-	100	61.003	Cercocebus_atys
ENSMODG00000019271	-	100	56.968	ENSCLAG00000015617	-	100	68.148	Chinchilla_lanigera
ENSMODG00000019271	-	100	67.901	ENSCSAG00000015200	SSB	89	52.798	Chlorocebus_sabaeus
ENSMODG00000019271	-	98	62.025	ENSCSAG00000018390	-	100	62.025	Chlorocebus_sabaeus
ENSMODG00000019271	-	100	57.946	ENSCHOG00000007763	SSB	100	56.479	Choloepus_hoffmanni
ENSMODG00000019271	-	100	62.592	ENSCPBG00000006519	SSB	100	64.792	Chrysemys_picta_bellii
ENSMODG00000019271	-	100	63.496	ENSCANG00000033240	-	100	63.496	Colobus_angolensis_palliatus
ENSMODG00000019271	-	94	55.526	ENSCANG00000028838	-	91	55.285	Colobus_angolensis_palliatus
ENSMODG00000019271	-	100	67.654	ENSCANG00000027695	SSB	100	67.654	Colobus_angolensis_palliatus
ENSMODG00000019271	-	100	59.413	ENSCGRG00001024831	Ssb	100	60.147	Cricetulus_griseus_chok1gshd
ENSMODG00000019271	-	100	59.413	ENSCGRG00000005387	Ssb	100	60.147	Cricetulus_griseus_crigri
ENSMODG00000019271	-	97	47.739	ENSCSEG00000011599	ssb	99	47.739	Cynoglossus_semilaevis
ENSMODG00000019271	-	99	43.243	ENSCVAG00000021558	ssb	100	43.489	Cyprinodon_variegatus
ENSMODG00000019271	-	98	47.132	ENSDARG00000029252	ssb	99	46.650	Danio_rerio
ENSMODG00000019271	-	100	62.103	ENSDNOG00000013450	SSB	100	62.103	Dasypus_novemcinctus
ENSMODG00000019271	-	100	66.005	ENSDORG00000005543	Ssb	100	66.005	Dipodomys_ordii
ENSMODG00000019271	-	89	43.251	ENSEBUG00000001237	ssb	94	43.526	Eptatretus_burgeri
ENSMODG00000019271	-	100	67.160	ENSEASG00005022835	SSB	100	67.160	Equus_asinus_asinus
ENSMODG00000019271	-	100	67.407	ENSECAG00000018495	SSB	100	67.407	Equus_caballus
ENSMODG00000019271	-	71	60.072	ENSEEUG00000008077	SSB	78	60.072	Erinaceus_europaeus
ENSMODG00000019271	-	99	48.039	ENSELUG00000020929	ssb	100	48.267	Esox_lucius
ENSMODG00000019271	-	100	67.241	ENSFCAG00000011601	SSB	100	66.749	Felis_catus
ENSMODG00000019271	-	99	77.358	ENSFALG00000000930	SSB	85	77.358	Ficedula_albicollis
ENSMODG00000019271	-	100	52.555	ENSFDAG00000000598	SSB	100	67.407	Fukomys_damarensis
ENSMODG00000019271	-	65	61.446	ENSFHEG00000003268	ssb	95	52.874	Fundulus_heteroclitus
ENSMODG00000019271	-	97	46.384	ENSGMOG00000002664	ssb	99	46.517	Gadus_morhua
ENSMODG00000019271	-	99	77.987	ENSGALG00000009677	SSB	85	77.987	Gallus_gallus
ENSMODG00000019271	-	51	51.124	ENSGAFG00000002749	ssb	100	41.728	Gambusia_affinis
ENSMODG00000019271	-	99	48.549	ENSGACG00000005107	ssb	93	50.575	Gasterosteus_aculeatus
ENSMODG00000019271	-	100	62.347	ENSGAGG00000007807	SSB	100	64.303	Gopherus_agassizii
ENSMODG00000019271	-	54	75.521	ENSGGOG00000023471	-	78	75.521	Gorilla_gorilla
ENSMODG00000019271	-	100	57.828	ENSGGOG00000024891	-	100	57.828	Gorilla_gorilla
ENSMODG00000019271	-	99	44.913	ENSHBUG00000006584	ssb	94	45.455	Haplochromis_burtoni
ENSMODG00000019271	-	56	76.923	ENSHGLG00000011331	-	98	78.846	Heterocephalus_glaber_female
ENSMODG00000019271	-	100	55.831	ENSHGLG00000004478	-	100	55.583	Heterocephalus_glaber_female
ENSMODG00000019271	-	50	75.000	ENSHGLG00000001810	-	79	75.000	Heterocephalus_glaber_female
ENSMODG00000019271	-	100	64.322	ENSHGLG00000005832	-	100	63.980	Heterocephalus_glaber_female
ENSMODG00000019271	-	100	57.452	ENSHGLG00000017580	-	100	56.010	Heterocephalus_glaber_female
ENSMODG00000019271	-	100	57.452	ENSHGLG00100003084	-	100	56.010	Heterocephalus_glaber_male
ENSMODG00000019271	-	100	62.312	ENSHGLG00100008767	-	100	59.900	Heterocephalus_glaber_male
ENSMODG00000019271	-	97	47.475	ENSHCOG00000019011	ssb	99	47.727	Hippocampus_comes
ENSMODG00000019271	-	97	48.130	ENSIPUG00000003681	SSB	90	50.272	Ictalurus_punctatus
ENSMODG00000019271	-	100	61.614	ENSSTOG00000008416	SSB	100	67.407	Ictidomys_tridecemlineatus
ENSMODG00000019271	-	100	58.195	ENSJJAG00000023158	-	100	58.195	Jaculus_jaculus
ENSMODG00000019271	-	99	50.891	ENSJJAG00000016250	-	99	50.891	Jaculus_jaculus
ENSMODG00000019271	-	99	60.588	ENSKMAG00000017317	ssb	79	60.588	Kryptolebias_marmoratus
ENSMODG00000019271	-	99	46.173	ENSLBEG00000017345	ssb	94	47.721	Labrus_bergylta
ENSMODG00000019271	-	99	56.757	ENSLACG00000014056	SSB	99	57.843	Latimeria_chalumnae
ENSMODG00000019271	-	97	55.250	ENSLOCG00000007933	ssb	99	54.000	Lepisosteus_oculatus
ENSMODG00000019271	-	100	48.131	ENSLAFG00000000867	-	100	52.347	Loxodonta_africana
ENSMODG00000019271	-	100	55.867	ENSLAFG00000028909	-	100	55.867	Loxodonta_africana
ENSMODG00000019271	-	70	51.351	ENSLAFG00000026721	-	99	51.351	Loxodonta_africana
ENSMODG00000019271	-	100	67.654	ENSMFAG00000039066	SSB	100	67.654	Macaca_fascicularis
ENSMODG00000019271	-	86	66.667	ENSMFAG00000041478	-	100	66.667	Macaca_fascicularis
ENSMODG00000019271	-	100	67.654	ENSMMUG00000023051	SSB	100	67.654	Macaca_mulatta
ENSMODG00000019271	-	99	55.733	ENSMMUG00000039889	-	100	55.733	Macaca_mulatta
ENSMODG00000019271	-	100	65.195	ENSMMUG00000011724	-	97	65.195	Macaca_mulatta
ENSMODG00000019271	-	86	66.667	ENSMNEG00000034698	-	100	66.667	Macaca_nemestrina
ENSMODG00000019271	-	100	66.756	ENSMNEG00000028321	SSB	85	82.609	Macaca_nemestrina
ENSMODG00000019271	-	100	67.654	ENSMLEG00000035717	SSB	88	82.609	Mandrillus_leucophaeus
ENSMODG00000019271	-	100	54.167	ENSMLEG00000042644	-	100	54.167	Mandrillus_leucophaeus
ENSMODG00000019271	-	99	49.383	ENSMAMG00000004800	ssb	100	49.136	Mastacembelus_armatus
ENSMODG00000019271	-	99	45.658	ENSMZEG00005005749	ssb	100	45.161	Maylandia_zebra
ENSMODG00000019271	-	99	77.987	ENSMGAG00000010328	SSB	85	77.987	Meleagris_gallopavo
ENSMODG00000019271	-	98	67.192	ENSMICG00000033304	-	93	70.977	Microcebus_murinus
ENSMODG00000019271	-	99	55.528	ENSMICG00000028252	-	99	55.283	Microcebus_murinus
ENSMODG00000019271	-	88	51.705	ENSMALG00000008045	ssb	89	52.368	Monopterus_albus
ENSMODG00000019271	-	53	61.307	MGP_CAROLIEiJ_G0023629	-	98	79.487	Mus_caroli
ENSMODG00000019271	-	53	60.302	ENSMUSG00000068882	Ssb	98	79.487	Mus_musculus
ENSMODG00000019271	-	100	45.540	MGP_PahariEiJ_G0025081	-	98	78.205	Mus_pahari
ENSMODG00000019271	-	53	60.302	MGP_SPRETEiJ_G0024551	Ssb	98	79.487	Mus_spretus
ENSMODG00000019271	-	100	67.407	ENSMPUG00000000785	SSB	100	67.407	Mustela_putorius_furo
ENSMODG00000019271	-	100	53.302	ENSMLUG00000016316	SSB	100	53.302	Myotis_lucifugus
ENSMODG00000019271	-	99	45.409	ENSNBRG00000012661	ssb	100	45.161	Neolamprologus_brichardi
ENSMODG00000019271	-	100	54.499	ENSNLEG00000028754	-	100	54.499	Nomascus_leucogenys
ENSMODG00000019271	-	100	67.654	ENSNLEG00000004958	SSB	86	82.609	Nomascus_leucogenys
ENSMODG00000019271	-	66	90.909	ENSOPRG00000008475	-	78	90.909	Ochotona_princeps
ENSMODG00000019271	-	92	62.963	ENSODEG00000004202	-	100	62.963	Octodon_degus
ENSMODG00000019271	-	99	45.658	ENSONIG00000008776	ssb	93	45.968	Oreochromis_niloticus
ENSMODG00000019271	-	100	59.169	ENSOANG00000008543	SSB	100	55.474	Ornithorhynchus_anatinus
ENSMODG00000019271	-	100	53.041	ENSOCUG00000010396	SSB	100	67.407	Oryctolagus_cuniculus
ENSMODG00000019271	-	99	47.901	ENSORLG00000017208	ssb	100	48.148	Oryzias_latipes
ENSMODG00000019271	-	99	47.901	ENSORLG00020022574	ssb	100	48.148	Oryzias_latipes_hni
ENSMODG00000019271	-	99	47.901	ENSORLG00015016592	ssb	100	48.395	Oryzias_latipes_hsok
ENSMODG00000019271	-	99	42.222	ENSOMEG00000003193	ssb	100	42.222	Oryzias_melastigma
ENSMODG00000019271	-	100	65.877	ENSOGAG00000029768	SSB	100	65.877	Otolemur_garnettii
ENSMODG00000019271	-	100	53.041	ENSOARG00000002906	SSB	100	53.285	Ovis_aries
ENSMODG00000019271	-	90	54.496	ENSPPAG00000006189	-	96	55.041	Pan_paniscus
ENSMODG00000019271	-	100	59.542	ENSPPAG00000032427	-	100	73.643	Pan_paniscus
ENSMODG00000019271	-	100	67.402	ENSPPAG00000042673	SSB	86	82.609	Pan_paniscus
ENSMODG00000019271	-	100	67.241	ENSPPRG00000006599	SSB	100	66.749	Panthera_pardus
ENSMODG00000019271	-	100	67.241	ENSPTIG00000011021	SSB	97	66.749	Panthera_tigris_altaica
ENSMODG00000019271	-	100	60.212	ENSPTRG00000042880	-	100	60.212	Pan_troglodytes
ENSMODG00000019271	-	100	67.402	ENSPTRG00000012620	SSB	86	82.609	Pan_troglodytes
ENSMODG00000019271	-	100	67.654	ENSPANG00000007440	SSB	100	67.654	Papio_anubis
ENSMODG00000019271	-	100	57.453	ENSPANG00000034126	-	100	57.453	Papio_anubis
ENSMODG00000019271	-	98	51.852	ENSPANG00000031877	-	91	52.486	Papio_anubis
ENSMODG00000019271	-	99	50.495	ENSPKIG00000019325	ssb	98	52.033	Paramormyrops_kingsleyae
ENSMODG00000019271	-	100	61.614	ENSPSIG00000002265	SSB	93	62.103	Pelodiscus_sinensis
ENSMODG00000019271	-	83	53.125	ENSPMGG00000020075	ssb	79	53.750	Periophthalmus_magnuspinnatus
ENSMODG00000019271	-	78	46.769	ENSPMAG00000002982	ssb	89	45.526	Petromyzon_marinus
ENSMODG00000019271	-	100	65.854	ENSPCIG00000028591	-	100	79.803	Phascolarctos_cinereus
ENSMODG00000019271	-	51	53.933	ENSPFOG00000009650	ssb	100	42.963	Poecilia_formosa
ENSMODG00000019271	-	51	52.809	ENSPLAG00000020498	ssb	100	42.963	Poecilia_latipinna
ENSMODG00000019271	-	51	53.371	ENSPMEG00000001051	ssb	100	42.716	Poecilia_mexicana
ENSMODG00000019271	-	100	67.654	ENSPPYG00000012919	SSB	100	67.654	Pongo_abelii
ENSMODG00000019271	-	94	66.400	ENSPCAG00000010276	SSB	100	66.133	Procavia_capensis
ENSMODG00000019271	-	100	66.000	ENSPCOG00000015741	-	92	77.586	Propithecus_coquereli
ENSMODG00000019271	-	100	66.492	ENSPCOG00000023189	-	100	66.492	Propithecus_coquereli
ENSMODG00000019271	-	84	55.337	ENSPVAG00000006615	SSB	99	66.477	Pteropus_vampyrus
ENSMODG00000019271	-	99	45.161	ENSPNYG00000006444	ssb	100	44.665	Pundamilia_nyererei
ENSMODG00000019271	-	98	47.407	ENSPNAG00000011708	ssb	92	49.474	Pygocentrus_nattereri
ENSMODG00000019271	-	99	81.761	ENSRNOG00000007998	Ssb	100	59.286	Rattus_norvegicus
ENSMODG00000019271	-	100	57.985	ENSRNOG00000011606	AABR07061825.1	100	57.985	Rattus_norvegicus
ENSMODG00000019271	-	100	68.229	ENSRBIG00000041972	SSB	88	82.609	Rhinopithecus_bieti
ENSMODG00000019271	-	92	61.983	ENSRBIG00000041232	-	98	61.983	Rhinopithecus_bieti
ENSMODG00000019271	-	100	58.263	ENSRBIG00000029918	-	100	58.263	Rhinopithecus_bieti
ENSMODG00000019271	-	100	58.568	ENSRROG00000007149	-	100	58.568	Rhinopithecus_roxellana
ENSMODG00000019271	-	97	60.302	ENSRROG00000034102	-	83	75.661	Rhinopithecus_roxellana
ENSMODG00000019271	-	100	67.654	ENSRROG00000040346	SSB	100	67.654	Rhinopithecus_roxellana
ENSMODG00000019271	-	97	62.895	ENSRROG00000031684	-	100	62.895	Rhinopithecus_roxellana
ENSMODG00000019271	-	100	67.654	ENSSBOG00000027204	SSB	86	82.609	Saimiri_boliviensis_boliviensis
ENSMODG00000019271	-	100	64.390	ENSSHAG00000018062	SSB	100	78.571	Sarcophilus_harrisii
ENSMODG00000019271	-	99	51.961	ENSSFOG00015000550	ssb	100	52.451	Scleropages_formosus
ENSMODG00000019271	-	98	49.738	ENSSMAG00000013885	ssb	100	50.259	Scophthalmus_maximus
ENSMODG00000019271	-	99	48.148	ENSSDUG00000020117	ssb	100	48.395	Seriola_dumerili
ENSMODG00000019271	-	99	51.036	ENSSLDG00000002525	ssb	100	51.036	Seriola_lalandi_dorsalis
ENSMODG00000019271	-	94	58.747	ENSSARG00000007747	SSB	100	58.747	Sorex_araneus
ENSMODG00000019271	-	100	49.395	ENSSPUG00000012112	SSB	100	63.882	Sphenodon_punctatus
ENSMODG00000019271	-	98	46.883	ENSSPAG00000005696	ssb	96	43.817	Stegastes_partitus
ENSMODG00000019271	-	99	56.858	ENSSSCG00000015938	SSB	95	57.330	Sus_scrofa
ENSMODG00000019271	-	99	76.730	ENSTGUG00000007942	SSB	85	76.730	Taeniopygia_guttata
ENSMODG00000019271	-	99	42.432	ENSTRUG00000017839	ssb	93	49.330	Takifugu_rubripes
ENSMODG00000019271	-	89	62.353	ENSTNIG00000000915	ssb	84	62.353	Tetraodon_nigroviridis
ENSMODG00000019271	-	86	82.609	ENSTBEG00000009056	SSB	76	82.609	Tupaia_belangeri
ENSMODG00000019271	-	100	67.654	ENSTTRG00000002152	SSB	100	67.407	Tursiops_truncatus
ENSMODG00000019271	-	92	51.688	ENSUAMG00000027833	SSB	99	51.688	Ursus_americanus
ENSMODG00000019271	-	100	53.155	ENSUMAG00000013907	SSB	100	67.241	Ursus_maritimus
ENSMODG00000019271	-	100	67.160	ENSVPAG00000007183	SSB	100	67.160	Vicugna_pacos
ENSMODG00000019271	-	99	85.535	ENSVVUG00000016573	SSB	66	85.535	Vulpes_vulpes
ENSMODG00000019271	-	100	70.909	ENSXETG00000025402	ssb	87	70.909	Xenopus_tropicalis
ENSMODG00000019271	-	93	43.501	ENSXCOG00000019109	ssb	93	57.812	Xiphophorus_couchianus
ENSMODG00000019271	-	99	45.679	ENSXMAG00000004888	ssb	100	40.741	Xiphophorus_maculatus