EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSMODG00000019449 (Gene tree)
Gene ID: 100014352
Gene Symbol: BLM
Alias: BS|RECQ2|RECQL3
Full Name: BLM RecQ like helicase
Gene Type: protein_coding
Species: Monodelphis_domestica
Status: putative
Strand: Plus strand
Length: 67351 bases
Position: chr1:121282775-121350125
Accession: 100014352
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMODP00000024262	HRDC	PF00570.23	1.3e-11	1	1
ENSMODP00000024262	BDHCT	PF08072.11	1.1e-20	1	1
ENSMODP00000024262	DEAD	PF00270.29	1.2e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMODT00000024692	BLM-201	4968	XM_007479294	ENSMODP00000024262	1451 (aa)	XP_007479356	F6RXI0

Gene Model

Click here to download ENSMODG00000019449's gene model file

Pathways

Pathway ID	Pathway Name	Source
mdo03440	Homologous recombination	KEGG
mdo03460	Fanconi anemia pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMODG00000019449's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMODG00000019449	BLM	99	64.670	ENSG00000197299	BLM	99	64.874	Homo_sapiens
ENSMODG00000019449	BLM	80	51.236	ENSAPOG00000017966	blm	99	44.740	Acanthochromis_polyacanthus
ENSMODG00000019449	BLM	99	64.606	ENSAMEG00000013843	BLM	99	64.339	Ailuropoda_melanoleuca
ENSMODG00000019449	BLM	66	62.560	ENSACIG00000023762	blm	66	62.799	Amphilophus_citrinellus
ENSMODG00000019449	BLM	59	60.748	ENSAOCG00000003318	blm	61	60.748	Amphiprion_ocellaris
ENSMODG00000019449	BLM	59	60.631	ENSAPEG00000018105	blm	60	60.631	Amphiprion_percula
ENSMODG00000019449	BLM	80	59.782	ENSAPLG00000006878	BLM	97	58.514	Anas_platyrhynchos
ENSMODG00000019449	BLM	65	68.220	ENSACAG00000014275	BLM	100	48.802	Anolis_carolinensis
ENSMODG00000019449	BLM	99	64.437	ENSANAG00000038415	BLM	99	64.164	Aotus_nancymaae
ENSMODG00000019449	BLM	86	62.603	ENSACLG00000020354	blm	60	62.720	Astatotilapia_calliptera
ENSMODG00000019449	BLM	87	62.005	ENSAMXG00000016970	blm	87	62.398	Astyanax_mexicanus
ENSMODG00000019449	BLM	93	72.459	ENSBTAG00000020301	BLM	99	72.876	Bos_taurus
ENSMODG00000019449	BLM	99	64.218	ENSCJAG00000009803	BLM	99	63.717	Callithrix_jacchus
ENSMODG00000019449	BLM	99	65.277	ENSCAFG00000012385	BLM	99	64.610	Canis_familiaris
ENSMODG00000019449	BLM	99	65.277	ENSCAFG00020016111	BLM	95	85.890	Canis_lupus_dingo
ENSMODG00000019449	BLM	99	64.145	ENSCHIG00000010329	BLM	99	70.588	Capra_hircus
ENSMODG00000019449	BLM	99	64.043	ENSTSYG00000012368	BLM	99	65.089	Carlito_syrichta
ENSMODG00000019449	BLM	84	78.779	ENSCAPG00000017976	BLM	98	78.198	Cavia_aperea
ENSMODG00000019449	BLM	99	61.775	ENSCPOG00000001761	BLM	99	61.775	Cavia_porcellus
ENSMODG00000019449	BLM	99	63.549	ENSCCAG00000023069	BLM	99	63.549	Cebus_capucinus
ENSMODG00000019449	BLM	99	64.874	ENSCATG00000040609	BLM	92	87.027	Cercocebus_atys
ENSMODG00000019449	BLM	99	62.824	ENSCLAG00000012111	BLM	99	62.960	Chinchilla_lanigera
ENSMODG00000019449	BLM	99	64.455	ENSCSAG00000017040	BLM	99	64.658	Chlorocebus_sabaeus
ENSMODG00000019449	BLM	92	70.564	ENSCHOG00000006255	BLM	94	70.564	Choloepus_hoffmanni
ENSMODG00000019449	BLM	90	57.089	ENSCPBG00000025000	BLM	86	74.760	Chrysemys_picta_bellii
ENSMODG00000019449	BLM	84	85.556	ENSCANG00000034808	BLM	100	85.556	Colobus_angolensis_palliatus
ENSMODG00000019449	BLM	99	62.201	ENSCGRG00001024897	Blm	99	62.449	Cricetulus_griseus_chok1gshd
ENSMODG00000019449	BLM	68	54.945	ENSCGRG00000016261	Blm	97	55.245	Cricetulus_griseus_crigri
ENSMODG00000019449	BLM	59	79.167	ENSCVAG00000017583	blm	79	79.167	Cyprinodon_variegatus
ENSMODG00000019449	BLM	100	45.533	ENSDARG00000077089	blm	56	65.743	Danio_rerio
ENSMODG00000019449	BLM	100	63.612	ENSDNOG00000010159	BLM	99	63.976	Dasypus_novemcinctus
ENSMODG00000019449	BLM	74	69.195	ENSDORG00000011033	Blm	99	69.316	Dipodomys_ordii
ENSMODG00000019449	BLM	50	41.611	FBgn0002906	Blm	51	41.214	Drosophila_melanogaster
ENSMODG00000019449	BLM	86	58.810	ENSETEG00000015019	BLM	84	58.810	Echinops_telfairi
ENSMODG00000019449	BLM	99	63.388	ENSEASG00005006727	BLM	99	63.003	Equus_asinus_asinus
ENSMODG00000019449	BLM	99	65.232	ENSECAG00000011405	BLM	99	65.529	Equus_caballus
ENSMODG00000019449	BLM	98	60.960	ENSEEUG00000001434	BLM	98	60.610	Erinaceus_europaeus
ENSMODG00000019449	BLM	54	65.909	ENSELUG00000019098	blm	54	65.909	Esox_lucius
ENSMODG00000019449	BLM	99	63.747	ENSFCAG00000006087	BLM	99	63.747	Felis_catus
ENSMODG00000019449	BLM	79	66.212	ENSFALG00000010981	BLM	79	66.590	Ficedula_albicollis
ENSMODG00000019449	BLM	99	58.135	ENSFDAG00000012658	BLM	99	58.152	Fukomys_damarensis
ENSMODG00000019449	BLM	57	62.081	ENSFHEG00000002553	blm	80	50.847	Fundulus_heteroclitus
ENSMODG00000019449	BLM	87	58.693	ENSGMOG00000016431	blm	98	56.697	Gadus_morhua
ENSMODG00000019449	BLM	84	56.146	ENSGALG00000008256	BLM	100	50.033	Gallus_gallus
ENSMODG00000019449	BLM	59	61.130	ENSGAFG00000001117	blm	99	45.473	Gambusia_affinis
ENSMODG00000019449	BLM	88	50.708	ENSGACG00000010863	blm	100	73.535	Gasterosteus_aculeatus
ENSMODG00000019449	BLM	88	54.457	ENSGAGG00000005383	BLM	85	74.332	Gopherus_agassizii
ENSMODG00000019449	BLM	99	64.315	ENSGGOG00000007710	BLM	92	87.568	Gorilla_gorilla
ENSMODG00000019449	BLM	99	63.500	ENSHGLG00000013231	BLM	99	63.636	Heterocephalus_glaber_female
ENSMODG00000019449	BLM	59	59.954	ENSHCOG00000011455	blm	84	60.141	Hippocampus_comes
ENSMODG00000019449	BLM	59	60.714	ENSIPUG00000000529	blm	67	64.413	Ictalurus_punctatus
ENSMODG00000019449	BLM	99	63.420	ENSSTOG00000005000	BLM	99	63.513	Ictidomys_tridecemlineatus
ENSMODG00000019449	BLM	66	73.179	ENSJJAG00000016322	Blm	94	73.179	Jaculus_jaculus
ENSMODG00000019449	BLM	87	68.019	ENSLACG00000006490	BLM	100	51.571	Latimeria_chalumnae
ENSMODG00000019449	BLM	87	62.194	ENSLOCG00000014302	blm	88	62.427	Lepisosteus_oculatus
ENSMODG00000019449	BLM	99	65.146	ENSMFAG00000042982	BLM	92	87.297	Macaca_fascicularis
ENSMODG00000019449	BLM	99	65.214	ENSMMUG00000019526	BLM	92	87.297	Macaca_mulatta
ENSMODG00000019449	BLM	98	63.649	ENSMNEG00000031251	BLM	92	87.027	Macaca_nemestrina
ENSMODG00000019449	BLM	99	62.764	ENSMLEG00000032934	BLM	99	62.832	Mandrillus_leucophaeus
ENSMODG00000019449	BLM	58	62.412	ENSMAMG00000008726	blm	72	62.456	Mastacembelus_armatus
ENSMODG00000019449	BLM	99	62.321	ENSMAUG00000008953	Blm	99	62.457	Mesocricetus_auratus
ENSMODG00000019449	BLM	99	64.087	ENSMICG00000034442	BLM	99	64.198	Microcebus_murinus
ENSMODG00000019449	BLM	99	62.038	ENSMOCG00000016367	Blm	99	62.107	Microtus_ochrogaster
ENSMODG00000019449	BLM	70	60.995	ENSMMOG00000006959	blm	71	61.404	Mola_mola
ENSMODG00000019449	BLM	99	61.350	MGP_CAROLIEiJ_G0029907	Blm	99	61.062	Mus_caroli
ENSMODG00000019449	BLM	99	60.881	ENSMUSG00000030528	Blm	99	60.678	Mus_musculus
ENSMODG00000019449	BLM	99	61.843	MGP_PahariEiJ_G0013129	Blm	99	61.365	Mus_pahari
ENSMODG00000019449	BLM	99	61.153	MGP_SPRETEiJ_G0031009	Blm	99	60.870	Mus_spretus
ENSMODG00000019449	BLM	84	64.177	ENSMPUG00000015657	BLM	99	64.051	Mustela_putorius_furo
ENSMODG00000019449	BLM	99	64.014	ENSMLUG00000014697	BLM	99	64.198	Myotis_lucifugus
ENSMODG00000019449	BLM	99	62.867	ENSNGAG00000001275	Blm	99	62.466	Nannospalax_galili
ENSMODG00000019449	BLM	99	63.376	ENSNLEG00000012087	BLM	99	68.940	Nomascus_leucogenys
ENSMODG00000019449	BLM	100	79.341	ENSMEUG00000007253	BLM	100	79.204	Notamacropus_eugenii
ENSMODG00000019449	BLM	96	81.604	ENSOPRG00000011667	BLM	95	81.051	Ochotona_princeps
ENSMODG00000019449	BLM	74	66.141	ENSODEG00000015373	BLM	99	65.863	Octodon_degus
ENSMODG00000019449	BLM	86	62.397	ENSONIG00000015193	blm	59	62.397	Oreochromis_niloticus
ENSMODG00000019449	BLM	53	83.615	ENSOANG00000009316	-	100	83.615	Ornithorhynchus_anatinus
ENSMODG00000019449	BLM	99	60.724	ENSOCUG00000013969	BLM	99	60.478	Oryctolagus_cuniculus
ENSMODG00000019449	BLM	62	66.624	ENSORLG00000008110	blm	63	66.164	Oryzias_latipes
ENSMODG00000019449	BLM	62	66.878	ENSORLG00020004812	blm	63	66.415	Oryzias_latipes_hni
ENSMODG00000019449	BLM	62	62.563	ENSORLG00015018640	blm	79	67.219	Oryzias_latipes_hsok
ENSMODG00000019449	BLM	99	62.346	ENSOGAG00000005708	BLM	99	62.234	Otolemur_garnettii
ENSMODG00000019449	BLM	99	63.823	ENSOARG00000012875	BLM	99	64.529	Ovis_aries
ENSMODG00000019449	BLM	99	64.261	ENSPPAG00000032173	BLM	99	64.806	Pan_paniscus
ENSMODG00000019449	BLM	99	63.476	ENSPPRG00000002471	BLM	99	63.476	Panthera_pardus
ENSMODG00000019449	BLM	99	63.426	ENSPTIG00000016168	BLM	99	63.426	Panthera_tigris_altaica
ENSMODG00000019449	BLM	99	63.921	ENSPTRG00000007460	BLM	99	64.466	Pan_troglodytes
ENSMODG00000019449	BLM	99	65.078	ENSPANG00000018572	BLM	92	87.297	Papio_anubis
ENSMODG00000019449	BLM	50	66.758	ENSPMGG00000006629	blm	80	67.033	Periophthalmus_magnuspinnatus
ENSMODG00000019449	BLM	99	62.271	ENSPEMG00000017348	Blm	99	62.339	Peromyscus_maniculatus_bairdii
ENSMODG00000019449	BLM	100	87.234	ENSPCIG00000006609	BLM	100	87.165	Phascolarctos_cinereus
ENSMODG00000019449	BLM	59	61.503	ENSPFOG00000005059	blm	99	45.087	Poecilia_formosa
ENSMODG00000019449	BLM	59	61.503	ENSPMEG00000000321	blm	99	45.382	Poecilia_mexicana
ENSMODG00000019449	BLM	54	65.223	ENSPREG00000007715	blm	99	45.017	Poecilia_reticulata
ENSMODG00000019449	BLM	99	63.989	ENSPPYG00000006784	BLM	99	64.193	Pongo_abelii
ENSMODG00000019449	BLM	72	77.960	ENSPCAG00000008960	BLM	71	77.491	Procavia_capensis
ENSMODG00000019449	BLM	99	59.498	ENSPCOG00000000439	BLM	99	63.314	Propithecus_coquereli
ENSMODG00000019449	BLM	79	92.652	ENSPVAG00000011642	BLM	81	92.652	Pteropus_vampyrus
ENSMODG00000019449	BLM	58	51.116	ENSPNYG00000010956	blm	57	51.225	Pundamilia_nyererei
ENSMODG00000019449	BLM	57	63.832	ENSPNAG00000011714	blm	67	63.626	Pygocentrus_nattereri
ENSMODG00000019449	BLM	99	60.974	ENSRNOG00000011213	Blm	99	60.494	Rattus_norvegicus
ENSMODG00000019449	BLM	99	63.828	ENSRBIG00000029656	BLM	92	85.946	Rhinopithecus_bieti
ENSMODG00000019449	BLM	99	64.646	ENSRROG00000037871	BLM	92	85.946	Rhinopithecus_roxellana
ENSMODG00000019449	BLM	91	63.905	ENSSBOG00000030957	BLM	99	62.130	Saimiri_boliviensis_boliviensis
ENSMODG00000019449	BLM	100	84.589	ENSSHAG00000007988	BLM	100	84.521	Sarcophilus_harrisii
ENSMODG00000019449	BLM	54	64.885	ENSSFOG00015015462	blm	64	64.885	Scleropages_formosus
ENSMODG00000019449	BLM	67	62.209	ENSSMAG00000001120	blm	72	62.326	Scophthalmus_maximus
ENSMODG00000019449	BLM	85	65.089	ENSSARG00000006398	BLM	90	64.915	Sorex_araneus
ENSMODG00000019449	BLM	71	65.261	ENSSPUG00000000013	BLM	88	64.889	Sphenodon_punctatus
ENSMODG00000019449	BLM	58	61.710	ENSSPAG00000013999	blm	59	62.005	Stegastes_partitus
ENSMODG00000019449	BLM	95	84.362	ENSSSCG00000001816	BLM	99	84.362	Sus_scrofa
ENSMODG00000019449	BLM	69	59.701	ENSTGUG00000009959	-	86	59.977	Taeniopygia_guttata
ENSMODG00000019449	BLM	65	62.515	ENSTNIG00000019246	blm	68	61.796	Tetraodon_nigroviridis
ENSMODG00000019449	BLM	80	77.009	ENSTBEG00000006706	BLM	81	77.009	Tupaia_belangeri
ENSMODG00000019449	BLM	99	65.714	ENSTTRG00000016386	BLM	99	66.281	Tursiops_truncatus
ENSMODG00000019449	BLM	99	64.742	ENSUMAG00000009105	BLM	96	86.008	Ursus_maritimus
ENSMODG00000019449	BLM	100	62.976	ENSVPAG00000000085	BLM	100	63.119	Vicugna_pacos
ENSMODG00000019449	BLM	95	84.247	ENSVVUG00000006402	BLM	99	84.247	Vulpes_vulpes
ENSMODG00000019449	BLM	88	69.390	ENSXETG00000007847	blm	83	73.597	Xenopus_tropicalis
ENSMODG00000019449	BLM	54	61.245	ENSXCOG00000020227	blm	55	61.118	Xiphophorus_couchianus
ENSMODG00000019449	BLM	54	64.676	ENSXMAG00000002951	blm	99	44.959	Xiphophorus_maculatus