EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMODG00000019494 (Gene tree)
Gene ID: 100017078
Gene Symbol: MTREX
Alias: Dob1|KIAA0052|Mtr4|SKIV2L2|fSAP118
Full Name: Mtr4 exosome RNA helicase
Gene Type: protein_coding
Species: Monodelphis_domestica
Status: putative
Strand: Plus strand
Length: 83433 bases
Position: chr3:17769358-17852790
Accession: 100017078
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMODP00000024321	rRNA_proc-arch	PF13234.6	4.2e-86	1	1
ENSMODP00000024321	DEAD	PF00270.29	3.1e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMODT00000024751	MTREX-201	3301	XM_007486321	ENSMODP00000024321	1033 (aa)	XP_007486383	F6VUX5

Gene Model

Click here to download ENSMODG00000019494's gene model file

Pathways

Pathway ID	Pathway Name	Source
mdo03018	RNA degradation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMODG00000019494's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMODG00000019494	MTREX	88	36.117	ENSMODG00000015052	SKIV2L	76	36.117

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMODG00000019494	MTREX	100	93.474	ENSG00000039123	MTREX	100	93.090	Homo_sapiens
ENSMODG00000019494	MTREX	100	83.462	ENSAPOG00000007814	mtrex	100	83.381	Acanthochromis_polyacanthus
ENSMODG00000019494	MTREX	100	93.289	ENSAMEG00000013856	MTREX	100	93.193	Ailuropoda_melanoleuca
ENSMODG00000019494	MTREX	100	82.353	ENSACIG00000015117	mtrex	100	82.064	Amphilophus_citrinellus
ENSMODG00000019494	MTREX	100	83.558	ENSAOCG00000011884	mtrex	100	83.126	Amphiprion_ocellaris
ENSMODG00000019494	MTREX	100	83.462	ENSAPEG00000019384	mtrex	100	83.030	Amphiprion_percula
ENSMODG00000019494	MTREX	100	84.231	ENSATEG00000015117	mtrex	100	84.246	Anabas_testudineus
ENSMODG00000019494	MTREX	96	92.238	ENSAPLG00000009694	MTREX	99	92.238	Anas_platyrhynchos
ENSMODG00000019494	MTREX	100	91.434	ENSACAG00000015200	MTREX	96	91.049	Anolis_carolinensis
ENSMODG00000019494	MTREX	100	93.090	ENSANAG00000023095	MTREX	98	95.186	Aotus_nancymaae
ENSMODG00000019494	MTREX	100	83.285	ENSACLG00000001921	mtrex	100	83.381	Astatotilapia_calliptera
ENSMODG00000019494	MTREX	97	82.359	ENSAMXG00000018751	mtrex	99	84.397	Astyanax_mexicanus
ENSMODG00000019494	MTREX	100	93.846	ENSBTAG00000010518	MTREX	100	93.654	Bos_taurus
ENSMODG00000019494	MTREX	92	53.207	WBGene00012342	mtr-4	97	51.944	Caenorhabditis_elegans
ENSMODG00000019494	MTREX	100	92.366	ENSCJAG00000001773	MTREX	100	92.366	Callithrix_jacchus
ENSMODG00000019494	MTREX	100	93.282	ENSCAFG00000006818	MTREX	100	93.282	Canis_familiaris
ENSMODG00000019494	MTREX	100	93.282	ENSCAFG00020024352	MTREX	100	93.282	Canis_lupus_dingo
ENSMODG00000019494	MTREX	100	93.397	ENSCHIG00000024413	MTREX	100	93.282	Capra_hircus
ENSMODG00000019494	MTREX	94	94.255	ENSTSYG00000007389	MTREX	100	94.255	Carlito_syrichta
ENSMODG00000019494	MTREX	97	70.441	ENSCAPG00000008696	MTREX	100	70.441	Cavia_aperea
ENSMODG00000019494	MTREX	100	93.301	ENSCPOG00000009797	MTREX	100	93.090	Cavia_porcellus
ENSMODG00000019494	MTREX	100	92.898	ENSCCAG00000014177	MTREX	100	92.994	Cebus_capucinus
ENSMODG00000019494	MTREX	100	93.378	ENSCATG00000042153	MTREX	100	92.994	Cercocebus_atys
ENSMODG00000019494	MTREX	100	93.090	ENSCLAG00000006622	MTREX	100	92.994	Chinchilla_lanigera
ENSMODG00000019494	MTREX	100	89.091	ENSCSAG00000016445	MTREX	100	88.708	Chlorocebus_sabaeus
ENSMODG00000019494	MTREX	69	98.611	ENSCHOG00000010936	-	70	98.611	Choloepus_hoffmanni
ENSMODG00000019494	MTREX	100	92.754	ENSCPBG00000026551	MTREX	94	93.043	Chrysemys_picta_bellii
ENSMODG00000019494	MTREX	99	67.020	ENSCING00000003239	-	99	67.213	Ciona_intestinalis
ENSMODG00000019494	MTREX	99	65.643	ENSCSAVG00000009304	-	100	70.430	Ciona_savignyi
ENSMODG00000019494	MTREX	100	93.282	ENSCANG00000035770	MTREX	100	92.994	Colobus_angolensis_palliatus
ENSMODG00000019494	MTREX	100	93.276	ENSCGRG00001024680	Mtrex	100	93.180	Cricetulus_griseus_chok1gshd
ENSMODG00000019494	MTREX	100	93.276	ENSCGRG00000000307	Mtrex	100	93.180	Cricetulus_griseus_crigri
ENSMODG00000019494	MTREX	100	82.772	ENSCSEG00000018621	mtrex	98	82.788	Cynoglossus_semilaevis
ENSMODG00000019494	MTREX	100	83.862	ENSCVAG00000004556	mtrex	100	83.750	Cyprinodon_variegatus
ENSMODG00000019494	MTREX	100	85.453	ENSDARG00000013457	mtrex	100	85.164	Danio_rerio
ENSMODG00000019494	MTREX	100	92.830	ENSDNOG00000015375	MTREX	100	92.830	Dasypus_novemcinctus
ENSMODG00000019494	MTREX	100	93.282	ENSDORG00000006782	Mtrex	100	92.898	Dipodomys_ordii
ENSMODG00000019494	MTREX	99	61.991	FBgn0001986	Mtr4	99	62.085	Drosophila_melanogaster
ENSMODG00000019494	MTREX	90	76.552	ENSETEG00000000727	MTREX	90	76.552	Echinops_telfairi
ENSMODG00000019494	MTREX	99	75.072	ENSEBUG00000012869	mtrex	99	75.072	Eptatretus_burgeri
ENSMODG00000019494	MTREX	100	93.206	ENSEASG00005013270	MTREX	100	93.282	Equus_asinus_asinus
ENSMODG00000019494	MTREX	100	93.301	ENSECAG00000023723	MTREX	100	96.296	Equus_caballus
ENSMODG00000019494	MTREX	98	84.728	ENSEEUG00000000527	MTREX	100	84.488	Erinaceus_europaeus
ENSMODG00000019494	MTREX	100	83.543	ENSELUG00000004898	mtrex	100	89.811	Esox_lucius
ENSMODG00000019494	MTREX	100	93.378	ENSFCAG00000010575	MTREX	100	93.282	Felis_catus
ENSMODG00000019494	MTREX	100	89.768	ENSFALG00000010850	MTREX	100	89.575	Ficedula_albicollis
ENSMODG00000019494	MTREX	100	93.173	ENSFDAG00000011199	MTREX	100	92.885	Fukomys_damarensis
ENSMODG00000019494	MTREX	100	83.573	ENSFHEG00000023014	mtrex	100	82.454	Fundulus_heteroclitus
ENSMODG00000019494	MTREX	100	79.885	ENSGMOG00000014702	mtrex	100	80.269	Gadus_morhua
ENSMODG00000019494	MTREX	100	91.965	ENSGALG00000014709	MTREX	86	91.868	Gallus_gallus
ENSMODG00000019494	MTREX	100	84.327	ENSGAFG00000012425	mtrex	100	84.327	Gambusia_affinis
ENSMODG00000019494	MTREX	100	79.769	ENSGACG00000016260	mtrex	96	85.109	Gasterosteus_aculeatus
ENSMODG00000019494	MTREX	100	92.367	ENSGAGG00000020036	MTREX	100	92.464	Gopherus_agassizii
ENSMODG00000019494	MTREX	100	93.570	ENSGGOG00000001867	MTREX	100	93.186	Gorilla_gorilla
ENSMODG00000019494	MTREX	100	83.285	ENSHBUG00000006229	mtrex	100	83.381	Haplochromis_burtoni
ENSMODG00000019494	MTREX	100	92.885	ENSHGLG00000019445	SKIV2L2	100	92.885	Heterocephalus_glaber_female
ENSMODG00000019494	MTREX	100	92.885	ENSHGLG00100011833	SKIV2L2	100	92.885	Heterocephalus_glaber_male
ENSMODG00000019494	MTREX	92	84.318	ENSHCOG00000019995	mtrex	100	84.318	Hippocampus_comes
ENSMODG00000019494	MTREX	100	85.246	ENSIPUG00000024348	skiv2l2	100	85.246	Ictalurus_punctatus
ENSMODG00000019494	MTREX	100	93.014	ENSSTOG00000010802	MTREX	100	93.282	Ictidomys_tridecemlineatus
ENSMODG00000019494	MTREX	100	87.367	ENSJJAG00000020975	Mtrex	100	87.560	Jaculus_jaculus
ENSMODG00000019494	MTREX	100	83.269	ENSKMAG00000012642	mtrex	100	83.269	Kryptolebias_marmoratus
ENSMODG00000019494	MTREX	100	83.301	ENSLBEG00000019367	mtrex	99	85.401	Labrus_bergylta
ENSMODG00000019494	MTREX	100	88.889	ENSLACG00000009075	MTREX	100	88.696	Latimeria_chalumnae
ENSMODG00000019494	MTREX	100	87.536	ENSLOCG00000010186	mtrex	100	87.440	Lepisosteus_oculatus
ENSMODG00000019494	MTREX	99	90.691	ENSLAFG00000010497	MTREX	100	90.691	Loxodonta_africana
ENSMODG00000019494	MTREX	100	93.378	ENSMFAG00000031610	MTREX	100	92.994	Macaca_fascicularis
ENSMODG00000019494	MTREX	100	92.146	ENSMMUG00000010379	MTREX	100	91.762	Macaca_mulatta
ENSMODG00000019494	MTREX	100	93.378	ENSMNEG00000032746	MTREX	100	92.994	Macaca_nemestrina
ENSMODG00000019494	MTREX	100	93.378	ENSMLEG00000041051	MTREX	100	92.994	Mandrillus_leucophaeus
ENSMODG00000019494	MTREX	100	82.567	ENSMAMG00000016753	mtrex	98	85.529	Mastacembelus_armatus
ENSMODG00000019494	MTREX	100	83.285	ENSMZEG00005000414	mtrex	100	83.381	Maylandia_zebra
ENSMODG00000019494	MTREX	95	66.936	ENSMGAG00000003980	MTREX	100	66.936	Meleagris_gallopavo
ENSMODG00000019494	MTREX	100	93.564	ENSMAUG00000010727	Mtrex	100	93.564	Mesocricetus_auratus
ENSMODG00000019494	MTREX	100	93.570	ENSMICG00000012779	MTREX	100	93.570	Microcebus_murinus
ENSMODG00000019494	MTREX	100	93.282	ENSMOCG00000019886	Mtrex	100	92.898	Microtus_ochrogaster
ENSMODG00000019494	MTREX	100	81.809	ENSMMOG00000002476	mtrex	100	81.809	Mola_mola
ENSMODG00000019494	MTREX	92	82.190	ENSMALG00000002917	mtrex	99	82.190	Monopterus_albus
ENSMODG00000019494	MTREX	100	93.462	MGP_CAROLIEiJ_G0018896	Mtrex	100	93.173	Mus_caroli
ENSMODG00000019494	MTREX	100	93.558	ENSMUSG00000016018	Mtrex	100	93.269	Mus_musculus
ENSMODG00000019494	MTREX	100	93.269	MGP_PahariEiJ_G0015967	Mtrex	100	92.981	Mus_pahari
ENSMODG00000019494	MTREX	100	93.558	MGP_SPRETEiJ_G0019775	Mtrex	100	93.269	Mus_spretus
ENSMODG00000019494	MTREX	100	93.378	ENSMPUG00000007619	MTREX	100	93.378	Mustela_putorius_furo
ENSMODG00000019494	MTREX	100	92.713	ENSMLUG00000001152	MTREX	100	92.809	Myotis_lucifugus
ENSMODG00000019494	MTREX	100	93.282	ENSNGAG00000011938	Mtrex	100	92.898	Nannospalax_galili
ENSMODG00000019494	MTREX	100	83.173	ENSNBRG00000011293	mtrex	100	83.269	Neolamprologus_brichardi
ENSMODG00000019494	MTREX	100	89.080	ENSNLEG00000001494	MTREX	100	89.080	Nomascus_leucogenys
ENSMODG00000019494	MTREX	83	100.000	ENSMEUG00000006496	-	83	100.000	Notamacropus_eugenii
ENSMODG00000019494	MTREX	100	78.826	ENSOPRG00000008009	MTREX	100	78.826	Ochotona_princeps
ENSMODG00000019494	MTREX	100	92.514	ENSODEG00000017234	MTREX	100	92.131	Octodon_degus
ENSMODG00000019494	MTREX	100	82.885	ENSONIG00000007587	mtrex	100	82.981	Oreochromis_niloticus
ENSMODG00000019494	MTREX	50	93.945	ENSOANG00000004885	-	99	93.945	Ornithorhynchus_anatinus
ENSMODG00000019494	MTREX	100	93.462	ENSOCUG00000004463	MTREX	100	93.558	Oryctolagus_cuniculus
ENSMODG00000019494	MTREX	100	83.365	ENSORLG00000005443	mtrex	100	83.269	Oryzias_latipes
ENSMODG00000019494	MTREX	100	83.365	ENSORLG00020006329	mtrex	100	83.269	Oryzias_latipes_hni
ENSMODG00000019494	MTREX	100	83.365	ENSORLG00015012924	mtrex	100	83.269	Oryzias_latipes_hsok
ENSMODG00000019494	MTREX	100	82.646	ENSOMEG00000008825	mtrex	100	82.550	Oryzias_melastigma
ENSMODG00000019494	MTREX	100	93.186	ENSOGAG00000002886	MTREX	100	93.186	Otolemur_garnettii
ENSMODG00000019494	MTREX	100	93.130	ENSOARG00000007764	MTREX	100	93.014	Ovis_aries
ENSMODG00000019494	MTREX	100	93.474	ENSPPAG00000039291	MTREX	100	93.090	Pan_paniscus
ENSMODG00000019494	MTREX	100	93.378	ENSPPRG00000019701	MTREX	100	93.282	Panthera_pardus
ENSMODG00000019494	MTREX	100	91.843	ENSPTIG00000009313	MTREX	100	91.747	Panthera_tigris_altaica
ENSMODG00000019494	MTREX	100	93.474	ENSPTRG00000016878	MTREX	100	93.090	Pan_troglodytes
ENSMODG00000019494	MTREX	100	93.282	ENSPANG00000009697	MTREX	100	92.898	Papio_anubis
ENSMODG00000019494	MTREX	100	86.802	ENSPKIG00000020833	mtrex	100	86.802	Paramormyrops_kingsleyae
ENSMODG00000019494	MTREX	100	93.133	ENSPSIG00000012150	MTREX	100	92.843	Pelodiscus_sinensis
ENSMODG00000019494	MTREX	100	81.827	ENSPMGG00000002582	mtrex	100	81.827	Periophthalmus_magnuspinnatus
ENSMODG00000019494	MTREX	95	65.856	ENSPMAG00000009668	mtrex	100	65.755	Petromyzon_marinus
ENSMODG00000019494	MTREX	92	99.683	ENSPCIG00000024730	MTREX	100	99.683	Phascolarctos_cinereus
ENSMODG00000019494	MTREX	76	87.199	ENSPFOG00000003141	mtrex	100	87.437	Poecilia_formosa
ENSMODG00000019494	MTREX	100	84.438	ENSPLAG00000021311	mtrex	100	84.038	Poecilia_latipinna
ENSMODG00000019494	MTREX	92	87.605	ENSPMEG00000010597	mtrex	99	87.920	Poecilia_mexicana
ENSMODG00000019494	MTREX	100	84.246	ENSPREG00000003089	mtrex	100	83.846	Poecilia_reticulata
ENSMODG00000019494	MTREX	98	93.463	ENSPPYG00000015469	MTREX	98	93.073	Pongo_abelii
ENSMODG00000019494	MTREX	94	79.535	ENSPCAG00000013120	MTREX	94	79.535	Procavia_capensis
ENSMODG00000019494	MTREX	99	87.987	ENSPCOG00000018092	MTREX	100	87.987	Propithecus_coquereli
ENSMODG00000019494	MTREX	100	92.919	ENSPVAG00000002445	MTREX	100	93.186	Pteropus_vampyrus
ENSMODG00000019494	MTREX	100	83.189	ENSPNYG00000006164	mtrex	100	83.285	Pundamilia_nyererei
ENSMODG00000019494	MTREX	100	86.127	ENSPNAG00000008794	mtrex	100	86.127	Pygocentrus_nattereri
ENSMODG00000019494	MTREX	99	92.323	ENSRNOG00000010125	Mtrex	97	92.420	Rattus_norvegicus
ENSMODG00000019494	MTREX	100	91.651	ENSRBIG00000034930	MTREX	100	91.267	Rhinopithecus_bieti
ENSMODG00000019494	MTREX	100	93.378	ENSRROG00000039895	MTREX	100	92.994	Rhinopithecus_roxellana
ENSMODG00000019494	MTREX	90	55.194	YJL050W	MTR4	89	55.194	Saccharomyces_cerevisiae
ENSMODG00000019494	MTREX	100	92.898	ENSSBOG00000026693	MTREX	98	95.085	Saimiri_boliviensis_boliviensis
ENSMODG00000019494	MTREX	97	99.298	ENSSHAG00000004600	MTREX	100	99.298	Sarcophilus_harrisii
ENSMODG00000019494	MTREX	100	88.235	ENSSFOG00015014355	skiv2l2	100	88.235	Scleropages_formosus
ENSMODG00000019494	MTREX	100	83.477	ENSSMAG00000007572	mtrex	100	83.189	Scophthalmus_maximus
ENSMODG00000019494	MTREX	100	83.927	ENSSDUG00000023789	mtrex	100	83.927	Seriola_dumerili
ENSMODG00000019494	MTREX	100	84.054	ENSSLDG00000006301	mtrex	100	83.734	Seriola_lalandi_dorsalis
ENSMODG00000019494	MTREX	100	90.211	ENSSARG00000008387	MTREX	100	90.211	Sorex_araneus
ENSMODG00000019494	MTREX	100	80.368	ENSSPUG00000007071	MTREX	100	80.658	Sphenodon_punctatus
ENSMODG00000019494	MTREX	100	82.188	ENSSPAG00000011319	mtrex	100	82.672	Stegastes_partitus
ENSMODG00000019494	MTREX	100	92.919	ENSSSCG00000016911	MTREX	100	93.186	Sus_scrofa
ENSMODG00000019494	MTREX	100	89.575	ENSTGUG00000002480	MTREX	100	89.286	Taeniopygia_guttata
ENSMODG00000019494	MTREX	100	82.692	ENSTRUG00000014571	mtrex	100	82.788	Takifugu_rubripes
ENSMODG00000019494	MTREX	100	77.735	ENSTBEG00000007769	MTREX	100	77.735	Tupaia_belangeri
ENSMODG00000019494	MTREX	100	93.365	ENSTTRG00000008678	MTREX	100	93.269	Tursiops_truncatus
ENSMODG00000019494	MTREX	100	92.823	ENSUAMG00000023061	MTREX	100	93.090	Ursus_americanus
ENSMODG00000019494	MTREX	100	92.529	ENSUMAG00000009373	MTREX	99	97.126	Ursus_maritimus
ENSMODG00000019494	MTREX	100	83.109	ENSVPAG00000011174	MTREX	100	82.821	Vicugna_pacos
ENSMODG00000019494	MTREX	100	93.474	ENSVVUG00000021337	MTREX	100	93.474	Vulpes_vulpes
ENSMODG00000019494	MTREX	100	89.168	ENSXETG00000032798	MTREX	100	89.072	Xenopus_tropicalis
ENSMODG00000019494	MTREX	100	83.958	ENSXMAG00000004799	mtrex	100	83.654	Xiphophorus_maculatus