EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMODG00000019828 (Gene tree)
Gene ID: -
Gene Symbol: LSG1
Alias: FLJ11301
Full Name: large 60S subunit nuclear export GTPase 1
Gene Type: protein_coding
Species: Monodelphis_domestica
Status: putative
Strand: Plus strand
Length: 7613 bases
Position: chrUn:8887534-8895146
Accession: 25652
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMODP00000024744	MMR_HSR1	PF01926.23	3e-11	1	1
ENSMODP00000024746	MMR_HSR1	PF01926.23	4.5e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMODT00000025182	LSG1-202	2566	-	ENSMODP00000024744	621 (aa)	-	H9H7H6
ENSMODT00000025184	LSG1-201	1941	-	ENSMODP00000024746	646 (aa)	-	H9H7H8

Gene Model

Click here to download ENSMODG00000019828's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMODG00000019828's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMODG00000019828	LSG1	52	31.579	ENSMODG00000016028	-	64	30.952

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMODG00000019828	LSG1	99	58.333	ENSG00000041802	LSG1	97	62.209	Homo_sapiens
ENSMODG00000019828	LSG1	99	56.173	ENSAPOG00000009694	lsg1	99	56.366	Acanthochromis_polyacanthus
ENSMODG00000019828	LSG1	99	57.808	ENSAMEG00000009343	LSG1	99	58.471	Ailuropoda_melanoleuca
ENSMODG00000019828	LSG1	98	55.172	ENSACIG00000012406	lsg1	99	55.487	Amphilophus_citrinellus
ENSMODG00000019828	LSG1	99	56.327	ENSAOCG00000016066	lsg1	99	56.832	Amphiprion_ocellaris
ENSMODG00000019828	LSG1	99	56.394	ENSAPEG00000003252	lsg1	99	56.502	Amphiprion_percula
ENSMODG00000019828	LSG1	98	55.385	ENSATEG00000011794	lsg1	99	55.573	Anabas_testudineus
ENSMODG00000019828	LSG1	95	56.583	ENSACAG00000004222	LSG1	100	56.740	Anolis_carolinensis
ENSMODG00000019828	LSG1	99	59.187	ENSANAG00000021153	LSG1	99	59.304	Aotus_nancymaae
ENSMODG00000019828	LSG1	99	55.335	ENSACLG00000000520	lsg1	99	55.335	Astatotilapia_calliptera
ENSMODG00000019828	LSG1	99	53.869	ENSAMXG00000008271	lsg1	99	55.075	Astyanax_mexicanus
ENSMODG00000019828	LSG1	99	58.600	ENSBTAG00000008461	LSG1	99	58.886	Bos_taurus
ENSMODG00000019828	LSG1	64	49.741	WBGene00016907	C53H9.2	85	49.741	Caenorhabditis_elegans
ENSMODG00000019828	LSG1	99	58.744	ENSCJAG00000013962	LSG1	99	59.607	Callithrix_jacchus
ENSMODG00000019828	LSG1	95	57.321	ENSCAFG00000013445	LSG1	100	57.944	Canis_familiaris
ENSMODG00000019828	LSG1	99	57.293	ENSCAFG00020002216	LSG1	99	59.003	Canis_lupus_dingo
ENSMODG00000019828	LSG1	99	59.140	ENSCHIG00000015769	LSG1	99	59.187	Capra_hircus
ENSMODG00000019828	LSG1	99	57.396	ENSTSYG00000001447	LSG1	99	58.370	Carlito_syrichta
ENSMODG00000019828	LSG1	95	60.417	ENSCAPG00000009856	LSG1	99	60.772	Cavia_aperea
ENSMODG00000019828	LSG1	99	58.621	ENSCCAG00000035744	LSG1	99	58.886	Cebus_capucinus
ENSMODG00000019828	LSG1	99	57.421	ENSCATG00000042060	LSG1	99	58.610	Cercocebus_atys
ENSMODG00000019828	LSG1	99	58.584	ENSCSAG00000008796	LSG1	91	59.153	Chlorocebus_sabaeus
ENSMODG00000019828	LSG1	98	56.130	ENSCPBG00000015941	LSG1	82	58.021	Chrysemys_picta_bellii
ENSMODG00000019828	LSG1	70	47.893	ENSCING00000007079	-	96	47.893	Ciona_intestinalis
ENSMODG00000019828	LSG1	76	52.439	ENSCSAVG00000002514	-	95	52.439	Ciona_savignyi
ENSMODG00000019828	LSG1	99	58.036	ENSCANG00000030709	LSG1	99	59.002	Colobus_angolensis_palliatus
ENSMODG00000019828	LSG1	99	57.982	ENSCGRG00001019846	Lsg1	99	58.434	Cricetulus_griseus_chok1gshd
ENSMODG00000019828	LSG1	99	57.526	ENSCGRG00000014617	Lsg1	99	58.122	Cricetulus_griseus_crigri
ENSMODG00000019828	LSG1	98	54.462	ENSCSEG00000008522	lsg1	99	54.338	Cynoglossus_semilaevis
ENSMODG00000019828	LSG1	98	55.919	ENSCVAG00000002484	lsg1	99	56.240	Cyprinodon_variegatus
ENSMODG00000019828	LSG1	99	56.098	ENSDARG00000015352	lsg1	99	56.528	Danio_rerio
ENSMODG00000019828	LSG1	99	58.974	ENSDNOG00000006224	LSG1	99	58.699	Dasypus_novemcinctus
ENSMODG00000019828	LSG1	98	41.348	FBgn0266284	Ns3	98	41.284	Drosophila_melanogaster
ENSMODG00000019828	LSG1	90	51.899	ENSETEG00000003888	LSG1	89	51.692	Echinops_telfairi
ENSMODG00000019828	LSG1	88	51.419	ENSEBUG00000003119	lsg1	85	51.252	Eptatretus_burgeri
ENSMODG00000019828	LSG1	99	57.333	ENSEASG00005000678	LSG1	99	58.457	Equus_asinus_asinus
ENSMODG00000019828	LSG1	99	58.220	ENSECAG00000017659	LSG1	99	58.126	Equus_caballus
ENSMODG00000019828	LSG1	84	56.667	ENSEEUG00000015217	LSG1	85	56.667	Erinaceus_europaeus
ENSMODG00000019828	LSG1	98	55.675	ENSELUG00000023973	lsg1	99	55.828	Esox_lucius
ENSMODG00000019828	LSG1	99	57.549	ENSFCAG00000024957	LSG1	99	58.209	Felis_catus
ENSMODG00000019828	LSG1	92	57.512	ENSFALG00000007210	LSG1	94	57.971	Ficedula_albicollis
ENSMODG00000019828	LSG1	99	58.563	ENSFDAG00000017373	LSG1	99	58.869	Fukomys_damarensis
ENSMODG00000019828	LSG1	97	54.773	ENSFHEG00000003680	lsg1	99	55.093	Fundulus_heteroclitus
ENSMODG00000019828	LSG1	85	65.417	ENSGMOG00000015834	lsg1	98	53.313	Gadus_morhua
ENSMODG00000019828	LSG1	99	55.354	ENSGALG00000007058	LSG1	87	56.109	Gallus_gallus
ENSMODG00000019828	LSG1	97	55.538	ENSGAFG00000015831	lsg1	99	55.846	Gambusia_affinis
ENSMODG00000019828	LSG1	98	54.518	ENSGACG00000009323	lsg1	99	54.255	Gasterosteus_aculeatus
ENSMODG00000019828	LSG1	99	57.997	ENSGGOG00000000520	LSG1	99	58.824	Gorilla_gorilla
ENSMODG00000019828	LSG1	99	55.864	ENSHBUG00000005659	lsg1	99	55.864	Haplochromis_burtoni
ENSMODG00000019828	LSG1	99	56.288	ENSHGLG00000017390	LSG1	99	57.951	Heterocephalus_glaber_female
ENSMODG00000019828	LSG1	99	56.288	ENSHGLG00100018587	LSG1	99	57.951	Heterocephalus_glaber_male
ENSMODG00000019828	LSG1	98	56.192	ENSHCOG00000016848	lsg1	99	55.810	Hippocampus_comes
ENSMODG00000019828	LSG1	99	55.969	ENSIPUG00000008631	lsg1	99	56.124	Ictalurus_punctatus
ENSMODG00000019828	LSG1	78	55.378	ENSSTOG00000010234	LSG1	92	56.773	Ictidomys_tridecemlineatus
ENSMODG00000019828	LSG1	99	58.045	ENSJJAG00000015513	Lsg1	99	58.797	Jaculus_jaculus
ENSMODG00000019828	LSG1	98	54.268	ENSKMAG00000009681	lsg1	99	54.893	Kryptolebias_marmoratus
ENSMODG00000019828	LSG1	98	55.172	ENSLBEG00000024261	lsg1	99	55.677	Labrus_bergylta
ENSMODG00000019828	LSG1	99	56.548	ENSLACG00000013399	LSG1	99	56.994	Latimeria_chalumnae
ENSMODG00000019828	LSG1	98	55.521	ENSLOCG00000004918	lsg1	99	56.515	Lepisosteus_oculatus
ENSMODG00000019828	LSG1	99	58.626	ENSLAFG00000012919	-	99	58.652	Loxodonta_africana
ENSMODG00000019828	LSG1	99	58.584	ENSMFAG00000039903	LSG1	99	58.459	Macaca_fascicularis
ENSMODG00000019828	LSG1	99	58.584	ENSMMUG00000010708	LSG1	99	59.153	Macaca_mulatta
ENSMODG00000019828	LSG1	99	58.434	ENSMNEG00000031538	LSG1	99	58.245	Macaca_nemestrina
ENSMODG00000019828	LSG1	99	58.548	ENSMLEG00000041184	LSG1	99	59.304	Mandrillus_leucophaeus
ENSMODG00000019828	LSG1	98	55.796	ENSMAMG00000000470	lsg1	99	55.247	Mastacembelus_armatus
ENSMODG00000019828	LSG1	99	55.864	ENSMZEG00005017865	lsg1	99	55.864	Maylandia_zebra
ENSMODG00000019828	LSG1	89	56.436	ENSMGAG00000007050	LSG1	99	57.358	Meleagris_gallopavo
ENSMODG00000019828	LSG1	91	57.096	ENSMAUG00000016976	Lsg1	92	57.843	Mesocricetus_auratus
ENSMODG00000019828	LSG1	99	57.357	ENSMICG00000049087	LSG1	99	57.727	Microcebus_murinus
ENSMODG00000019828	LSG1	99	59.104	ENSMOCG00000022136	Lsg1	99	58.657	Microtus_ochrogaster
ENSMODG00000019828	LSG1	84	62.656	ENSMMOG00000008884	lsg1	99	53.067	Mola_mola
ENSMODG00000019828	LSG1	99	60.215	MGP_CAROLIEiJ_G0020648	Lsg1	99	61.300	Mus_caroli
ENSMODG00000019828	LSG1	99	60.213	ENSMUSG00000022538	Lsg1	99	61.256	Mus_musculus
ENSMODG00000019828	LSG1	98	60.000	MGP_PahariEiJ_G0016352	Lsg1	99	60.698	Mus_pahari
ENSMODG00000019828	LSG1	99	59.848	MGP_SPRETEiJ_G0021544	Lsg1	99	60.909	Mus_spretus
ENSMODG00000019828	LSG1	98	57.798	ENSMPUG00000003734	LSG1	98	57.958	Mustela_putorius_furo
ENSMODG00000019828	LSG1	99	57.727	ENSMLUG00000012548	LSG1	99	58.333	Myotis_lucifugus
ENSMODG00000019828	LSG1	99	58.333	ENSNGAG00000021872	Lsg1	99	58.939	Nannospalax_galili
ENSMODG00000019828	LSG1	99	59.009	ENSNLEG00000008293	LSG1	99	59.879	Nomascus_leucogenys
ENSMODG00000019828	LSG1	69	80.412	ENSMEUG00000009041	-	85	80.412	Notamacropus_eugenii
ENSMODG00000019828	LSG1	99	54.992	ENSONIG00000002635	lsg1	99	55.760	Oreochromis_niloticus
ENSMODG00000019828	LSG1	95	61.180	ENSOANG00000012742	LSG1	99	60.748	Ornithorhynchus_anatinus
ENSMODG00000019828	LSG1	99	58.358	ENSOCUG00000004817	LSG1	99	59.342	Oryctolagus_cuniculus
ENSMODG00000019828	LSG1	98	55.300	ENSORLG00000007695	lsg1	99	55.120	Oryzias_latipes
ENSMODG00000019828	LSG1	98	55.352	ENSORLG00020016286	lsg1	99	55.640	Oryzias_latipes_hni
ENSMODG00000019828	LSG1	98	54.839	ENSORLG00015012025	lsg1	99	54.669	Oryzias_latipes_hsok
ENSMODG00000019828	LSG1	98	54.631	ENSOMEG00000022379	lsg1	99	54.984	Oryzias_melastigma
ENSMODG00000019828	LSG1	99	55.605	ENSOGAG00000003475	LSG1	99	56.581	Otolemur_garnettii
ENSMODG00000019828	LSG1	99	59.119	ENSOARG00000020403	LSG1	99	59.254	Ovis_aries
ENSMODG00000019828	LSG1	99	59.276	ENSPPAG00000029271	LSG1	99	58.974	Pan_paniscus
ENSMODG00000019828	LSG1	99	56.932	ENSPPRG00000010281	LSG1	99	57.585	Panthera_pardus
ENSMODG00000019828	LSG1	99	57.080	ENSPTIG00000010789	LSG1	99	57.749	Panthera_tigris_altaica
ENSMODG00000019828	LSG1	99	59.125	ENSPTRG00000015760	LSG1	99	58.824	Pan_troglodytes
ENSMODG00000019828	LSG1	99	58.584	ENSPANG00000018249	LSG1	99	58.459	Papio_anubis
ENSMODG00000019828	LSG1	97	54.474	ENSPKIG00000002895	lsg1	98	55.077	Paramormyrops_kingsleyae
ENSMODG00000019828	LSG1	96	57.798	ENSPSIG00000009821	LSG1	100	57.669	Pelodiscus_sinensis
ENSMODG00000019828	LSG1	95	55.189	ENSPMGG00000000931	lsg1	100	54.446	Periophthalmus_magnuspinnatus
ENSMODG00000019828	LSG1	99	58.806	ENSPEMG00000012082	-	99	58.657	Peromyscus_maniculatus_bairdii
ENSMODG00000019828	LSG1	99	53.892	ENSPMAG00000007451	lsg1	99	52.741	Petromyzon_marinus
ENSMODG00000019828	LSG1	97	78.680	ENSPCIG00000013890	LSG1	79	78.680	Phascolarctos_cinereus
ENSMODG00000019828	LSG1	97	55.781	ENSPFOG00000021882	lsg1	99	56.086	Poecilia_formosa
ENSMODG00000019828	LSG1	97	55.677	ENSPLAG00000019536	lsg1	99	55.982	Poecilia_latipinna
ENSMODG00000019828	LSG1	97	55.140	ENSPMEG00000017281	lsg1	99	55.453	Poecilia_mexicana
ENSMODG00000019828	LSG1	97	51.628	ENSPREG00000006048	lsg1	99	52.036	Poecilia_reticulata
ENSMODG00000019828	LSG1	92	58.525	ENSPPYG00000014425	LSG1	99	57.869	Pongo_abelii
ENSMODG00000019828	LSG1	82	56.962	ENSPCAG00000005511	LSG1	89	49.315	Procavia_capensis
ENSMODG00000019828	LSG1	99	57.784	ENSPCOG00000012360	LSG1	99	57.784	Propithecus_coquereli
ENSMODG00000019828	LSG1	99	55.183	ENSPNYG00000021994	lsg1	99	55.183	Pundamilia_nyererei
ENSMODG00000019828	LSG1	99	57.165	ENSPNAG00000015533	lsg1	99	57.165	Pygocentrus_nattereri
ENSMODG00000019828	LSG1	99	58.060	ENSRNOG00000001727	Lsg1	99	59.701	Rattus_norvegicus
ENSMODG00000019828	LSG1	99	58.084	ENSRBIG00000029053	LSG1	99	58.296	Rhinopithecus_bieti
ENSMODG00000019828	LSG1	99	58.084	ENSRROG00000037702	LSG1	99	58.296	Rhinopithecus_roxellana
ENSMODG00000019828	LSG1	84	35.714	YGL099W	LSG1	76	38.256	Saccharomyces_cerevisiae
ENSMODG00000019828	LSG1	99	58.631	ENSSBOG00000034938	LSG1	99	59.455	Saimiri_boliviensis_boliviensis
ENSMODG00000019828	LSG1	78	66.095	ENSSHAG00000003487	LSG1	100	66.157	Sarcophilus_harrisii
ENSMODG00000019828	LSG1	98	57.121	ENSSFOG00015008955	lsg1	99	57.298	Scleropages_formosus
ENSMODG00000019828	LSG1	98	56.068	ENSSDUG00000004622	lsg1	99	56.703	Seriola_dumerili
ENSMODG00000019828	LSG1	98	55.814	ENSSLDG00000010869	lsg1	99	56.454	Seriola_lalandi_dorsalis
ENSMODG00000019828	LSG1	83	56.734	ENSSARG00000012981	LSG1	84	57.576	Sorex_araneus
ENSMODG00000019828	LSG1	99	57.589	ENSSPUG00000016347	LSG1	98	57.589	Sphenodon_punctatus
ENSMODG00000019828	LSG1	99	49.466	ENSSPAG00000005508	lsg1	99	56.549	Stegastes_partitus
ENSMODG00000019828	LSG1	99	58.359	ENSSSCG00000011827	LSG1	99	58.055	Sus_scrofa
ENSMODG00000019828	LSG1	89	55.428	ENSTGUG00000009068	LSG1	100	56.250	Taeniopygia_guttata
ENSMODG00000019828	LSG1	98	52.665	ENSTRUG00000017380	lsg1	99	53.096	Takifugu_rubripes
ENSMODG00000019828	LSG1	98	54.726	ENSTNIG00000015570	lsg1	99	56.019	Tetraodon_nigroviridis
ENSMODG00000019828	LSG1	90	63.333	ENSTTRG00000000559	LSG1	91	63.333	Tursiops_truncatus
ENSMODG00000019828	LSG1	99	57.164	ENSUAMG00000012454	LSG1	99	57.988	Ursus_americanus
ENSMODG00000019828	LSG1	99	57.164	ENSUMAG00000000855	LSG1	99	57.988	Ursus_maritimus
ENSMODG00000019828	LSG1	95	55.836	ENSVPAG00000012400	LSG1	100	55.696	Vicugna_pacos
ENSMODG00000019828	LSG1	96	57.656	ENSVVUG00000008956	LSG1	98	58.150	Vulpes_vulpes
ENSMODG00000019828	LSG1	99	56.364	ENSXETG00000003451	lsg1	99	56.753	Xenopus_tropicalis
ENSMODG00000019828	LSG1	97	55.140	ENSXCOG00000003239	lsg1	99	55.436	Xiphophorus_couchianus
ENSMODG00000019828	LSG1	97	54.219	ENSXMAG00000005536	lsg1	99	55.053	Xiphophorus_maculatus