EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMODG00000019847 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Monodelphis_domestica
Status: putative
Strand: Minus strand
Length: 14019 bases
Position: chr5:274763592-274777610
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMODP00000024766	RRM_1	PF00076.22	1.3e-23	1	2
ENSMODP00000024766	RRM_1	PF00076.22	1.3e-23	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMODT00000025204	-	861	-	ENSMODP00000024766	286 (aa)	-	F6SA23

Gene Model

Click here to download ENSMODG00000019847's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMODG00000019847's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMODG00000019847	-	67	65.306	ENSMODG00000016198	PABPC1L	50	65.306

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMODG00000019847	-	68	82.692	ENSG00000090621	PABPC4	99	38.261	Homo_sapiens
ENSMODG00000019847	-	68	81.633	ENSAMXG00000018779	pabpc4	63	81.633	Astyanax_mexicanus
ENSMODG00000019847	-	51	42.331	ENSBTAG00000048536	-	88	42.331	Bos_taurus
ENSMODG00000019847	-	68	69.811	ENSEBUG00000000992	pabpc4	66	69.811	Eptatretus_burgeri
ENSMODG00000019847	-	66	76.596	ENSEBUG00000013782	pabpc4	53	50.000	Eptatretus_burgeri
ENSMODG00000019847	-	68	82.692	ENSEASG00005014119	PABPC4	51	82.692	Equus_asinus_asinus
ENSMODG00000019847	-	68	82.692	ENSECAG00000009396	PABPC4	51	82.692	Equus_caballus
ENSMODG00000019847	-	68	80.769	ENSEEUG00000002962	PABPC4	62	80.769	Erinaceus_europaeus
ENSMODG00000019847	-	67	83.673	ENSFHEG00000007548	pabpc4	50	80.392	Fundulus_heteroclitus
ENSMODG00000019847	-	67	83.673	ENSGAFG00000018195	pabpc4	54	82.979	Gambusia_affinis
ENSMODG00000019847	-	68	82.692	ENSSTOG00000010416	PABPC4	66	82.692	Ictidomys_tridecemlineatus
ENSMODG00000019847	-	68	81.481	ENSMAUG00000019763	-	54	81.481	Mesocricetus_auratus
ENSMODG00000019847	-	62	82.353	ENSMICG00000016633	-	51	82.353	Microcebus_murinus
ENSMODG00000019847	-	68	82.692	MGP_CAROLIEiJ_G0026435	-	99	42.568	Mus_caroli
ENSMODG00000019847	-	68	82.692	ENSMUSG00000011257	Pabpc4	92	46.296	Mus_musculus
ENSMODG00000019847	-	68	82.692	MGP_PahariEiJ_G0028765	Pabpc4	99	43.243	Mus_pahari
ENSMODG00000019847	-	68	82.692	MGP_SPRETEiJ_G0027415	Pabpc4	99	43.919	Mus_spretus
ENSMODG00000019847	-	68	82.500	ENSOPRG00000011984	PABPC4	64	82.500	Ochotona_princeps
ENSMODG00000019847	-	68	82.692	ENSOCUG00000000562	PABPC4	57	82.692	Oryctolagus_cuniculus
ENSMODG00000019847	-	67	81.633	ENSORLG00000017479	pabpc4	55	81.633	Oryzias_latipes
ENSMODG00000019847	-	67	81.633	ENSORLG00020018644	pabpc4	55	81.633	Oryzias_latipes_hni
ENSMODG00000019847	-	67	81.633	ENSORLG00015015042	pabpc4	55	81.633	Oryzias_latipes_hsok
ENSMODG00000019847	-	68	86.538	ENSPCIG00000020674	PABPC4	55	86.000	Phascolarctos_cinereus
ENSMODG00000019847	-	67	83.673	ENSPREG00000001589	pabpc4	50	83.673	Poecilia_reticulata
ENSMODG00000019847	-	67	83.673	ENSSDUG00000012683	pabpc4	51	83.673	Seriola_dumerili
ENSMODG00000019847	-	67	83.673	ENSSLDG00000013025	pabpc4	50	83.673	Seriola_lalandi_dorsalis
ENSMODG00000019847	-	67	83.673	ENSSPAG00000009252	pabpc4	51	83.673	Stegastes_partitus
ENSMODG00000019847	-	68	84.314	ENSUMAG00000019585	PABPC4	55	84.314	Ursus_maritimus