EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSMODG00000020201 (Gene tree)
Gene ID
100025681
Gene Symbol
PATL1
Alias
FLJ36874|Pat1b
Full Name
PAT1 homolog 1%2C processing body mRNA decay factor
Gene Type
protein_coding
Species
Monodelphis_domestica
Status
putative
Strand
Minus strand
Length
40707 bases
Position
chr5:295063888-295104594
Accession
100025681
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSMODP00000025268PAT1PF09770.97.5e-1711
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSMODT00000025717PATL1-2014009-ENSMODP00000025268766 (aa)XP_007497602F7G829
Gene Model
Click here to download ENSMODG00000020201's gene model file
Pathways
Pathway IDPathway NameSource
mdo03018RNA degradationKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSMODG00000020201's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSMODG00000020201PATL15537.028ENSMODG00000017690PATL27237.028
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSMODG00000020201PATL110087.435ENSG00000166889PATL110088.083Homo_sapiens
ENSMODG00000020201PATL16734.104ENSG00000229474PATL29937.088Homo_sapiens
ENSMODG00000020201PATL16133.966ENSAPOG00000022988patl25935.431Acanthochromis_polyacanthus
ENSMODG00000020201PATL18554.197ENSAPOG00000021290patl19846.517Acanthochromis_polyacanthus
ENSMODG00000020201PATL15436.408ENSAMEG00000014997PATL27535.266Ailuropoda_melanoleuca
ENSMODG00000020201PATL110087.435ENSAMEG00000014215PATL110087.435Ailuropoda_melanoleuca
ENSMODG00000020201PATL19647.564ENSACIG00000005182patl19947.102Amphilophus_citrinellus
ENSMODG00000020201PATL15454.808ENSAOCG00000021993patl19547.315Amphiprion_ocellaris
ENSMODG00000020201PATL16932.671ENSAOCG00000023738patl25335.253Amphiprion_ocellaris
ENSMODG00000020201PATL16233.682ENSAPEG00000011299patl26434.554Amphiprion_percula
ENSMODG00000020201PATL16362.500ENSAPEG00000021391patl19941.570Amphiprion_percula
ENSMODG00000020201PATL19361.667ENSATEG00000002230patl18453.409Anabas_testudineus
ENSMODG00000020201PATL16134.664ENSATEG00000019567patl26335.240Anabas_testudineus
ENSMODG00000020201PATL15438.983ENSAPLG00000003980PATL29832.489Anas_platyrhynchos
ENSMODG00000020201PATL17171.196ENSAPLG00000013394PATL110071.377Anas_platyrhynchos
ENSMODG00000020201PATL19983.766ENSACAG00000006607PATL19983.636Anolis_carolinensis
ENSMODG00000020201PATL110087.694ENSANAG00000023078PATL110088.342Aotus_nancymaae
ENSMODG00000020201PATL16266.667ENSACLG00000005144patl18051.185Astatotilapia_calliptera
ENSMODG00000020201PATL16035.381ENSACLG00000010326patl25436.754Astatotilapia_calliptera
ENSMODG00000020201PATL16935.185ENSAMXG00000020293patl29430.091Astyanax_mexicanus
ENSMODG00000020201PATL19944.311ENSAMXG00000010731patl19947.181Astyanax_mexicanus
ENSMODG00000020201PATL110087.953ENSBTAG00000005913PATL110087.953Bos_taurus
ENSMODG00000020201PATL15437.530ENSCJAG00000002379PATL27237.198Callithrix_jacchus
ENSMODG00000020201PATL110087.824ENSCJAG00000016192PATL110088.342Callithrix_jacchus
ENSMODG00000020201PATL16535.294ENSCAFG00000013629PATL27835.794Canis_familiaris
ENSMODG00000020201PATL110088.472ENSCAFG00000007581PATL110088.472Canis_familiaris
ENSMODG00000020201PATL16535.294ENSCAFG00020022169PATL27835.794Canis_lupus_dingo
ENSMODG00000020201PATL19988.381ENSCAFG00020001648PATL110088.381Canis_lupus_dingo
ENSMODG00000020201PATL110087.435ENSCHIG00000025913PATL110087.435Capra_hircus
ENSMODG00000020201PATL15439.372ENSCHIG00000026665PATL27438.902Capra_hircus
ENSMODG00000020201PATL19987.386ENSTSYG00000012748PATL19687.906Carlito_syrichta
ENSMODG00000020201PATL110084.197ENSCAPG00000013668PATL19984.974Cavia_aperea
ENSMODG00000020201PATL110083.291ENSCPOG00000006827PATL110084.051Cavia_porcellus
ENSMODG00000020201PATL110087.824ENSCCAG00000023759PATL110088.472Cebus_capucinus
ENSMODG00000020201PATL110087.565ENSCATG00000009629PATL110088.212Cercocebus_atys
ENSMODG00000020201PATL19984.876ENSCLAG00000003427PATL110085.528Chinchilla_lanigera
ENSMODG00000020201PATL15136.896ENSCLAG00000014407PATL27336.829Chinchilla_lanigera
ENSMODG00000020201PATL19087.805ENSCSAG00000006095PATL110088.522Chlorocebus_sabaeus
ENSMODG00000020201PATL16890.816ENSCHOG00000001611PATL18390.816Choloepus_hoffmanni
ENSMODG00000020201PATL16735.838ENSCPBG00000006150PATL26038.173Chrysemys_picta_bellii
ENSMODG00000020201PATL15437.530ENSCANG00000013856PATL27236.867Colobus_angolensis_palliatus
ENSMODG00000020201PATL19987.678ENSCANG00000039197PATL19988.428Colobus_angolensis_palliatus
ENSMODG00000020201PATL110087.953ENSCGRG00001024927Patl110088.601Cricetulus_griseus_chok1gshd
ENSMODG00000020201PATL110087.451ENSCGRG00000000461Patl110088.527Cricetulus_griseus_crigri
ENSMODG00000020201PATL16134.375ENSCSEG00000009438patl26034.091Cynoglossus_semilaevis
ENSMODG00000020201PATL19261.667ENSCSEG00000008261patl18451.846Cynoglossus_semilaevis
ENSMODG00000020201PATL16130.453ENSCVAG00000016203patl26330.465Cyprinodon_variegatus
ENSMODG00000020201PATL19943.905ENSCVAG00000006664patl110047.316Cyprinodon_variegatus
ENSMODG00000020201PATL15637.037ENSDARG00000089567patl25737.182Danio_rerio
ENSMODG00000020201PATL19947.030ENSDARG00000017423patl110046.788Danio_rerio
ENSMODG00000020201PATL19981.617ENSDNOG00000038865PATL110087.342Dasypus_novemcinctus
ENSMODG00000020201PATL110087.824ENSDORG00000000237Patl110088.472Dipodomys_ordii
ENSMODG00000020201PATL15237.250ENSDORG00000026649Patl27435.961Dipodomys_ordii
ENSMODG00000020201PATL110087.969ENSEASG00005007963PATL110087.969Equus_asinus_asinus
ENSMODG00000020201PATL110087.969ENSECAG00000011411PATL110087.969Equus_caballus
ENSMODG00000020201PATL19553.623ENSELUG00000024249patl19946.721Esox_lucius
ENSMODG00000020201PATL15436.364ENSELUG00000023244patl25436.364Esox_lucius
ENSMODG00000020201PATL110087.565ENSFCAG00000015573PATL110087.694Felis_catus
ENSMODG00000020201PATL16434.350ENSFCAG00000027170PATL27335.990Felis_catus
ENSMODG00000020201PATL18733.826ENSFALG00000009768PATL29831.606Ficedula_albicollis
ENSMODG00000020201PATL19983.115ENSFALG00000012150PATL19982.853Ficedula_albicollis
ENSMODG00000020201PATL15235.500ENSFDAG00000012242PATL27336.591Fukomys_damarensis
ENSMODG00000020201PATL19984.465ENSFDAG00000016128PATL110084.987Fukomys_damarensis
ENSMODG00000020201PATL16266.667ENSFHEG00000017790patl19251.205Fundulus_heteroclitus
ENSMODG00000020201PATL16032.553ENSGMOG00000005666patl29933.735Gadus_morhua
ENSMODG00000020201PATL15639.540ENSGALG00000002167PATL25936.731Gallus_gallus
ENSMODG00000020201PATL19980.709ENSGALG00000042641PATL110080.840Gallus_gallus
ENSMODG00000020201PATL18732.042ENSGAFG00000019344patl25836.758Gambusia_affinis
ENSMODG00000020201PATL16461.111ENSGAFG00000006508patl18459.459Gambusia_affinis
ENSMODG00000020201PATL19949.292ENSGACG00000016448patl19950.895Gasterosteus_aculeatus
ENSMODG00000020201PATL110086.476ENSGAGG00000004461PATL110087.050Gopherus_agassizii
ENSMODG00000020201PATL110087.824ENSGGOG00000004335PATL110088.472Gorilla_gorilla
ENSMODG00000020201PATL16734.104ENSGGOG00000025923PATL27236.386Gorilla_gorilla
ENSMODG00000020201PATL15835.269ENSHBUG00000005929patl26336.259Haplochromis_burtoni
ENSMODG00000020201PATL16266.667ENSHBUG00000005365patl18051.185Haplochromis_burtoni
ENSMODG00000020201PATL110085.104ENSHGLG00000018173PATL110085.622Heterocephalus_glaber_female
ENSMODG00000020201PATL19983.812ENSHGLG00100003453PATL110084.334Heterocephalus_glaber_male
ENSMODG00000020201PATL19266.667ENSHCOG00000001898patl18066.667Hippocampus_comes
ENSMODG00000020201PATL16334.827ENSHCOG00000016754patl25835.000Hippocampus_comes
ENSMODG00000020201PATL15736.219ENSIPUG00000020692patl26035.682Ictalurus_punctatus
ENSMODG00000020201PATL15937.748ENSSTOG00000033848PATL27437.471Ictidomys_tridecemlineatus
ENSMODG00000020201PATL19888.158ENSSTOG00000013764PATL19988.816Ictidomys_tridecemlineatus
ENSMODG00000020201PATL19986.554ENSJJAG00000010135Patl110087.206Jaculus_jaculus
ENSMODG00000020201PATL19258.333ENSKMAG00000020848patl18451.048Kryptolebias_marmoratus
ENSMODG00000020201PATL16133.002ENSKMAG00000021275patl25434.762Kryptolebias_marmoratus
ENSMODG00000020201PATL19268.333ENSLBEG00000023617patl18160.000Labrus_bergylta
ENSMODG00000020201PATL16234.647ENSLBEG00000022344patl25834.583Labrus_bergylta
ENSMODG00000020201PATL19858.355ENSLACG00000004640PATL19958.518Latimeria_chalumnae
ENSMODG00000020201PATL19830.620ENSLACG00000005291-9830.751Latimeria_chalumnae
ENSMODG00000020201PATL19948.474ENSLOCG00000000717patl19949.575Lepisosteus_oculatus
ENSMODG00000020201PATL110088.083ENSLAFG00000015161PATL110087.565Loxodonta_africana
ENSMODG00000020201PATL15236.500ENSLAFG00000031124PATL27336.250Loxodonta_africana
ENSMODG00000020201PATL110087.565ENSMFAG00000040851PATL110088.212Macaca_fascicularis
ENSMODG00000020201PATL110087.565ENSMMUG00000017287PATL110088.212Macaca_mulatta
ENSMODG00000020201PATL110087.565ENSMNEG00000038692PATL110088.212Macaca_nemestrina
ENSMODG00000020201PATL110087.565ENSMLEG00000030044PATL110088.212Mandrillus_leucophaeus
ENSMODG00000020201PATL19258.065ENSMAMG00000003950patl19847.478Mastacembelus_armatus
ENSMODG00000020201PATL15935.065ENSMAMG00000013327patl26335.253Mastacembelus_armatus
ENSMODG00000020201PATL16266.667ENSMZEG00005013404patl18051.185Maylandia_zebra
ENSMODG00000020201PATL16035.381ENSMZEG00005014292patl25436.754Maylandia_zebra
ENSMODG00000020201PATL19280.650ENSMGAG00000003406PATL19980.367Meleagris_gallopavo
ENSMODG00000020201PATL18689.877ENSMAUG00000012059Patl19689.877Mesocricetus_auratus
ENSMODG00000020201PATL19983.875ENSMICG00000004172PATL19889.117Microcebus_murinus
ENSMODG00000020201PATL110087.694ENSMOCG00000010087Patl110088.342Microtus_ochrogaster
ENSMODG00000020201PATL15435.922ENSMOCG00000015367Patl27435.036Microtus_ochrogaster
ENSMODG00000020201PATL15432.297ENSMMOG00000001299patl26032.057Mola_mola
ENSMODG00000020201PATL19947.594ENSMMOG00000013711patl110046.114Mola_mola
ENSMODG00000020201PATL17757.373ENSMALG00000018706patl19945.174Monopterus_albus
ENSMODG00000020201PATL16433.399ENSMALG00000008131patl25235.322Monopterus_albus
ENSMODG00000020201PATL110087.030MGP_CAROLIEiJ_G0022739Patl110087.678Mus_caroli
ENSMODG00000020201PATL110087.030ENSMUSG00000046139Patl110087.678Mus_musculus
ENSMODG00000020201PATL110086.900MGP_PahariEiJ_G0014233Patl110087.549Mus_pahari
ENSMODG00000020201PATL110087.160MGP_SPRETEiJ_G0023652Patl110087.808Mus_spretus
ENSMODG00000020201PATL110088.601ENSMPUG00000014607PATL110088.601Mustela_putorius_furo
ENSMODG00000020201PATL110085.714ENSMLUG00000011169PATL110085.714Myotis_lucifugus
ENSMODG00000020201PATL110087.113ENSNGAG00000003682Patl110087.371Nannospalax_galili
ENSMODG00000020201PATL15735.909ENSNBRG00000011745patl26135.666Neolamprologus_brichardi
ENSMODG00000020201PATL15844.571ENSNBRG00000015372patl17248.344Neolamprologus_brichardi
ENSMODG00000020201PATL15437.046ENSNLEG00000005673PATL27336.867Nomascus_leucogenys
ENSMODG00000020201PATL19985.117ENSNLEG00000013081PATL110085.864Nomascus_leucogenys
ENSMODG00000020201PATL17697.419ENSMEUG00000009391PATL18997.419Notamacropus_eugenii
ENSMODG00000020201PATL16889.516ENSOPRG00000007963PATL17989.516Ochotona_princeps
ENSMODG00000020201PATL17385.657ENSODEG00000001792PATL19985.657Octodon_degus
ENSMODG00000020201PATL16034.959ENSONIG00000011519patl25437.292Oreochromis_niloticus
ENSMODG00000020201PATL16266.667ENSONIG00000004170patl110048.010Oreochromis_niloticus
ENSMODG00000020201PATL15735.841ENSOANG00000001538-8837.237Ornithorhynchus_anatinus
ENSMODG00000020201PATL15291.940ENSOANG00000011117-9692.112Ornithorhynchus_anatinus
ENSMODG00000020201PATL15335.610ENSOCUG00000006339PATL27535.366Oryctolagus_cuniculus
ENSMODG00000020201PATL110087.565ENSOCUG00000002156PATL110088.212Oryctolagus_cuniculus
ENSMODG00000020201PATL15833.475ENSORLG00000005780patl26831.667Oryzias_latipes
ENSMODG00000020201PATL16433.532ENSORLG00020016506patl26632.037Oryzias_latipes_hni
ENSMODG00000020201PATL16433.333ENSORLG00015014500patl26831.852Oryzias_latipes_hsok
ENSMODG00000020201PATL15436.342ENSOMEG00000021628patl25736.580Oryzias_melastigma
ENSMODG00000020201PATL110088.342ENSOGAG00000004351PATL110088.990Otolemur_garnettii
ENSMODG00000020201PATL15435.561ENSOGAG00000004709PATL27234.762Otolemur_garnettii
ENSMODG00000020201PATL19987.875ENSOARG00000012005PATL19687.875Ovis_aries
ENSMODG00000020201PATL15337.284ENSOARG00000003762PATL27237.379Ovis_aries
ENSMODG00000020201PATL110087.824ENSPPAG00000034275PATL110088.472Pan_paniscus
ENSMODG00000020201PATL16734.423ENSPPAG00000007221PATL27136.627Pan_paniscus
ENSMODG00000020201PATL19987.484ENSPPRG00000020639PATL110087.614Panthera_pardus
ENSMODG00000020201PATL16434.146ENSPPRG00000004279PATL27335.749Panthera_pardus
ENSMODG00000020201PATL16434.146ENSPTIG00000018964PATL27335.749Panthera_tigris_altaica
ENSMODG00000020201PATL110087.565ENSPTIG00000019298PATL110087.694Panthera_tigris_altaica
ENSMODG00000020201PATL19980.809ENSPTRG00000003697PATL110080.809Pan_troglodytes
ENSMODG00000020201PATL16734.104ENSPTRG00000041536PATL27136.386Pan_troglodytes
ENSMODG00000020201PATL110087.565ENSPANG00000035620PATL110088.212Papio_anubis
ENSMODG00000020201PATL19947.549ENSPKIG00000016224patl19948.775Paramormyrops_kingsleyae
ENSMODG00000020201PATL15537.383ENSPKIG00000016887patl29430.615Paramormyrops_kingsleyae
ENSMODG00000020201PATL15535.981ENSPSIG00000017690PATL29635.000Pelodiscus_sinensis
ENSMODG00000020201PATL110086.736ENSPSIG00000016206PATL19686.606Pelodiscus_sinensis
ENSMODG00000020201PATL15935.232ENSPMGG00000014550patl27234.599Periophthalmus_magnuspinnatus
ENSMODG00000020201PATL19056.595ENSPMGG00000002644patl19946.330Periophthalmus_magnuspinnatus
ENSMODG00000020201PATL110087.289ENSPEMG00000014215Patl110087.938Peromyscus_maniculatus_bairdii
ENSMODG00000020201PATL16134.110ENSPEMG00000016509Patl27235.910Peromyscus_maniculatus_bairdii
ENSMODG00000020201PATL16533.932ENSPCIG00000018256PATL27836.298Phascolarctos_cinereus
ENSMODG00000020201PATL110096.349ENSPCIG00000010852PATL110096.349Phascolarctos_cinereus
ENSMODG00000020201PATL110046.556ENSPFOG00000007768patl110046.927Poecilia_formosa
ENSMODG00000020201PATL19831.100ENSPLAG00000020713patl29530.368Poecilia_latipinna
ENSMODG00000020201PATL15555.107ENSPLAG00000018465patl17650.597Poecilia_latipinna
ENSMODG00000020201PATL19830.973ENSPMEG00000018942patl29530.241Poecilia_mexicana
ENSMODG00000020201PATL18550.453ENSPMEG00000006555patl17650.749Poecilia_mexicana
ENSMODG00000020201PATL17448.354ENSPREG00000003874patl17050.607Poecilia_reticulata
ENSMODG00000020201PATL110087.953ENSPPYG00000003230PATL110088.601Pongo_abelii
ENSMODG00000020201PATL110087.824ENSPCOG00000020770PATL110088.472Propithecus_coquereli
ENSMODG00000020201PATL15437.681ENSPCOG00000000295PATL29938.187Propithecus_coquereli
ENSMODG00000020201PATL18584.122ENSPVAG00000015239PATL19984.733Pteropus_vampyrus
ENSMODG00000020201PATL17854.683ENSPNYG00000018936patl19654.655Pundamilia_nyererei
ENSMODG00000020201PATL15834.839ENSPNYG00000017381patl26335.797Pundamilia_nyererei
ENSMODG00000020201PATL16335.223ENSPNAG00000002315patl26835.306Pygocentrus_nattereri
ENSMODG00000020201PATL19945.663ENSPNAG00000017907patl19947.052Pygocentrus_nattereri
ENSMODG00000020201PATL110086.900ENSRNOG00000021052Patl110087.549Rattus_norvegicus
ENSMODG00000020201PATL110078.315ENSRBIG00000032263PATL110077.571Rhinopithecus_bieti
ENSMODG00000020201PATL110087.694ENSRROG00000032861PATL110088.342Rhinopithecus_roxellana
ENSMODG00000020201PATL110087.694ENSSBOG00000025195PATL110088.342Saimiri_boliviensis_boliviensis
ENSMODG00000020201PATL110095.731ENSSHAG00000004309PATL110095.731Sarcophilus_harrisii
ENSMODG00000020201PATL19631.177ENSSFOG00015000720patl29530.856Scleropages_formosus
ENSMODG00000020201PATL19266.667ENSSMAG00000009482patl18254.444Scophthalmus_maximus
ENSMODG00000020201PATL16534.921ENSSMAG00000017262patl26635.862Scophthalmus_maximus
ENSMODG00000020201PATL16334.298ENSSDUG00000022927patl26034.161Seriola_dumerili
ENSMODG00000020201PATL18968.333ENSSDUG00000005362patl17659.722Seriola_dumerili
ENSMODG00000020201PATL16834.644ENSSLDG00000017922patl26036.916Seriola_lalandi_dorsalis
ENSMODG00000020201PATL18966.667ENSSLDG00000019146patl17852.381Seriola_lalandi_dorsalis
ENSMODG00000020201PATL18086.905ENSSARG00000009600PATL18087.759Sorex_araneus
ENSMODG00000020201PATL15135.641ENSSARG00000009047PATL27535.128Sorex_araneus
ENSMODG00000020201PATL110086.180ENSSPUG00000009453PATL110086.180Sphenodon_punctatus
ENSMODG00000020201PATL16134.702ENSSPAG00000004784patl26235.267Stegastes_partitus
ENSMODG00000020201PATL15454.197ENSSPAG00000003187patl19846.863Stegastes_partitus
ENSMODG00000020201PATL110088.212ENSSSCG00000013124PATL110088.212Sus_scrofa
ENSMODG00000020201PATL15236.650ENSTGUG00000004619-9837.157Taeniopygia_guttata
ENSMODG00000020201PATL19982.682ENSTGUG00000006222PATL110081.901Taeniopygia_guttata
ENSMODG00000020201PATL19450.000ENSTRUG00000000709patl19945.129Takifugu_rubripes
ENSMODG00000020201PATL16233.820ENSTRUG00000005647patl25635.800Takifugu_rubripes
ENSMODG00000020201PATL19083.256ENSTBEG00000000796PATL19083.023Tupaia_belangeri
ENSMODG00000020201PATL17290.176ENSTTRG00000009389PATL18490.102Tursiops_truncatus
ENSMODG00000020201PATL15436.320ENSUAMG00000018533PATL27135.266Ursus_americanus
ENSMODG00000020201PATL19987.911ENSUMAG00000018634PATL110088.522Ursus_maritimus
ENSMODG00000020201PATL15436.562ENSUMAG00000007738PATL27135.507Ursus_maritimus
ENSMODG00000020201PATL16391.071ENSVPAG00000009224PATL17691.071Vicugna_pacos
ENSMODG00000020201PATL19988.281ENSVVUG00000016668PATL110088.809Vulpes_vulpes
ENSMODG00000020201PATL16535.644ENSVVUG00000011576PATL27236.715Vulpes_vulpes
ENSMODG00000020201PATL16634.630ENSXETG00000014167patl28733.904Xenopus_tropicalis
ENSMODG00000020201PATL16164.912ENSXCOG00000010808patl19864.912Xiphophorus_couchianus
ENSMODG00000020201PATL15735.622ENSXMAG00000018464patl25436.364Xiphophorus_maculatus
ENSMODG00000020201PATL18547.898ENSXMAG00000013834patl17550.523Xiphophorus_maculatus

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