EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSMODG00000020353 (Gene tree)
Gene ID: 100027158
Gene Symbol: DDB1
Alias: -
Full Name: damage specific DNA binding protein 1
Gene Type: protein_coding
Species: Monodelphis_domestica
Status: putative
Strand: Minus strand
Length: 22394 bases
Position: chr5:299398190-299420583
Accession: 2717
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMODP00000025457	CPSF_A	PF03178.15	9e-83	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMODT00000025908	DDB1-201	3447	-	ENSMODP00000025457	1148 (aa)	-	F7FKA3

Gene Model

Click here to download ENSMODG00000020353's gene model file

Pathways

Pathway ID	Pathway Name	Source
mdo03420	Nucleotide excision repair	KEGG
mdo04120	Ubiquitin mediated proteolysis	KEGG
mdo05161	Hepatitis B	KEGG
mdo05170	Human immunodeficiency virus 1 infection	KEGG
mdo05203	Viral carcinogenesis	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMODG00000020353's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMODG00000020353	DDB1	100	89.187	ENSG00000167986	DDB1	100	100.000	Homo_sapiens
ENSMODG00000020353	DDB1	98	82.374	ENSAPOG00000005036	ddb1	99	82.503	Acanthochromis_polyacanthus
ENSMODG00000020353	DDB1	100	89.273	ENSAMEG00000016518	DDB1	100	89.273	Ailuropoda_melanoleuca
ENSMODG00000020353	DDB1	85	82.808	ENSACIG00000020624	ddb1	99	82.808	Amphilophus_citrinellus
ENSMODG00000020353	DDB1	100	82.266	ENSAOCG00000003066	ddb1	100	82.266	Amphiprion_ocellaris
ENSMODG00000020353	DDB1	100	82.353	ENSAPEG00000000092	ddb1	99	83.395	Amphiprion_percula
ENSMODG00000020353	DDB1	95	82.091	ENSATEG00000020571	ddb1	99	82.091	Anabas_testudineus
ENSMODG00000020353	DDB1	98	87.522	ENSAPLG00000007174	DDB1	99	87.522	Anas_platyrhynchos
ENSMODG00000020353	DDB1	100	87.543	ENSACAG00000017758	DDB1	100	87.543	Anolis_carolinensis
ENSMODG00000020353	DDB1	100	89.187	ENSANAG00000021878	DDB1	100	89.187	Aotus_nancymaae
ENSMODG00000020353	DDB1	100	82.612	ENSACLG00000012401	ddb1	100	82.612	Astatotilapia_calliptera
ENSMODG00000020353	DDB1	100	89.273	ENSBTAG00000021569	DDB1	93	89.273	Bos_taurus
ENSMODG00000020353	DDB1	100	35.943	WBGene00010890	ddb-1	100	35.859	Caenorhabditis_elegans
ENSMODG00000020353	DDB1	100	89.187	ENSCJAG00000019319	DDB1	100	89.187	Callithrix_jacchus
ENSMODG00000020353	DDB1	100	89.273	ENSCAFG00000016264	DDB1	100	89.273	Canis_familiaris
ENSMODG00000020353	DDB1	93	89.786	ENSCAFG00020012722	DDB1	99	89.786	Canis_lupus_dingo
ENSMODG00000020353	DDB1	100	89.273	ENSCHIG00000014969	DDB1	100	89.273	Capra_hircus
ENSMODG00000020353	DDB1	100	88.754	ENSTSYG00000008027	DDB1	100	88.754	Carlito_syrichta
ENSMODG00000020353	DDB1	98	88.546	ENSCAPG00000010786	DDB1	100	88.546	Cavia_aperea
ENSMODG00000020353	DDB1	100	88.754	ENSCPOG00000009956	DDB1	100	88.754	Cavia_porcellus
ENSMODG00000020353	DDB1	100	89.187	ENSCCAG00000035883	DDB1	100	89.187	Cebus_capucinus
ENSMODG00000020353	DDB1	100	86.901	ENSCATG00000044495	DDB1	100	86.901	Cercocebus_atys
ENSMODG00000020353	DDB1	100	88.754	ENSCLAG00000004126	DDB1	100	88.754	Chinchilla_lanigera
ENSMODG00000020353	DDB1	100	89.187	ENSCSAG00000006392	DDB1	100	89.187	Chlorocebus_sabaeus
ENSMODG00000020353	DDB1	88	89.094	ENSCHOG00000011377	DDB1	90	89.094	Choloepus_hoffmanni
ENSMODG00000020353	DDB1	100	88.322	ENSCPBG00000017728	DDB1	100	88.322	Chrysemys_picta_bellii
ENSMODG00000020353	DDB1	100	56.948	ENSCING00000007437	-	100	56.655	Ciona_intestinalis
ENSMODG00000020353	DDB1	84	59.572	ENSCSAVG00000004783	-	95	55.040	Ciona_savignyi
ENSMODG00000020353	DDB1	100	89.187	ENSCANG00000019948	DDB1	100	89.187	Colobus_angolensis_palliatus
ENSMODG00000020353	DDB1	94	96.429	ENSCGRG00001016599	Ddb1	100	96.429	Cricetulus_griseus_chok1gshd
ENSMODG00000020353	DDB1	100	89.273	ENSCGRG00000013427	Ddb1	100	89.273	Cricetulus_griseus_crigri
ENSMODG00000020353	DDB1	92	82.895	ENSCSEG00000012499	ddb1	99	81.616	Cynoglossus_semilaevis
ENSMODG00000020353	DDB1	93	83.225	ENSCVAG00000019531	ddb1	99	83.225	Cyprinodon_variegatus
ENSMODG00000020353	DDB1	100	79.775	ENSDARG00000074431	ddb1	100	79.914	Danio_rerio
ENSMODG00000020353	DDB1	93	89.508	ENSDNOG00000014884	DDB1	97	89.508	Dasypus_novemcinctus
ENSMODG00000020353	DDB1	84	96.118	ENSDORG00000000127	Ddb1	100	96.118	Dipodomys_ordii
ENSMODG00000020353	DDB1	100	56.121	FBgn0260962	pic	100	55.910	Drosophila_melanogaster
ENSMODG00000020353	DDB1	71	78.169	ENSETEG00000001053	-	71	78.169	Echinops_telfairi
ENSMODG00000020353	DDB1	77	75.000	ENSEBUG00000014593	ddb1	97	74.804	Eptatretus_burgeri
ENSMODG00000020353	DDB1	100	89.100	ENSEASG00005008184	DDB1	100	89.100	Equus_asinus_asinus
ENSMODG00000020353	DDB1	100	89.187	ENSECAG00000012136	DDB1	100	89.187	Equus_caballus
ENSMODG00000020353	DDB1	65	99.342	ENSEEUG00000003194	DDB1	66	99.342	Erinaceus_europaeus
ENSMODG00000020353	DDB1	100	82.180	ENSELUG00000023868	ddb1	100	82.180	Esox_lucius
ENSMODG00000020353	DDB1	100	89.273	ENSFCAG00000029716	DDB1	100	89.273	Felis_catus
ENSMODG00000020353	DDB1	100	88.149	ENSFALG00000011981	DDB1	100	88.149	Ficedula_albicollis
ENSMODG00000020353	DDB1	100	88.841	ENSFDAG00000005128	DDB1	100	88.841	Fukomys_damarensis
ENSMODG00000020353	DDB1	90	86.194	ENSFHEG00000022133	ddb1	98	86.194	Fundulus_heteroclitus
ENSMODG00000020353	DDB1	72	94.667	ENSGMOG00000019386	ddb1	86	94.667	Gadus_morhua
ENSMODG00000020353	DDB1	100	87.889	ENSGALG00000042333	DDB1	100	87.889	Gallus_gallus
ENSMODG00000020353	DDB1	93	82.947	ENSGAFG00000013142	ddb1	99	82.947	Gambusia_affinis
ENSMODG00000020353	DDB1	96	81.301	ENSGACG00000017182	ddb1	100	81.301	Gasterosteus_aculeatus
ENSMODG00000020353	DDB1	95	87.909	ENSGAGG00000014124	DDB1	100	87.909	Gopherus_agassizii
ENSMODG00000020353	DDB1	100	89.187	ENSGGOG00000004052	DDB1	100	89.187	Gorilla_gorilla
ENSMODG00000020353	DDB1	100	82.612	ENSHBUG00000008873	ddb1	100	82.612	Haplochromis_burtoni
ENSMODG00000020353	DDB1	100	88.581	ENSHGLG00000018430	DDB1	100	88.581	Heterocephalus_glaber_female
ENSMODG00000020353	DDB1	100	87.543	ENSHGLG00100014475	DDB1	100	87.543	Heterocephalus_glaber_male
ENSMODG00000020353	DDB1	93	82.931	ENSHCOG00000018670	ddb1	98	82.931	Hippocampus_comes
ENSMODG00000020353	DDB1	100	81.661	ENSIPUG00000005612	DDB1	100	81.661	Ictalurus_punctatus
ENSMODG00000020353	DDB1	100	89.187	ENSSTOG00000007552	DDB1	100	89.187	Ictidomys_tridecemlineatus
ENSMODG00000020353	DDB1	100	89.187	ENSJJAG00000017769	Ddb1	100	89.187	Jaculus_jaculus
ENSMODG00000020353	DDB1	93	83.210	ENSKMAG00000002315	ddb1	100	83.210	Kryptolebias_marmoratus
ENSMODG00000020353	DDB1	84	82.128	ENSLBEG00000017065	ddb1	99	82.128	Labrus_bergylta
ENSMODG00000020353	DDB1	100	84.948	ENSLACG00000017611	DDB1	100	84.948	Latimeria_chalumnae
ENSMODG00000020353	DDB1	88	87.500	ENSLOCG00000000012	ddb1	96	87.500	Lepisosteus_oculatus
ENSMODG00000020353	DDB1	100	89.014	ENSLAFG00000011513	DDB1	100	89.014	Loxodonta_africana
ENSMODG00000020353	DDB1	100	89.187	ENSMFAG00000042035	DDB1	100	89.187	Macaca_fascicularis
ENSMODG00000020353	DDB1	99	89.102	ENSMMUG00000002691	DDB1	100	100.000	Macaca_mulatta
ENSMODG00000020353	DDB1	100	89.187	ENSMNEG00000031559	DDB1	100	89.187	Macaca_nemestrina
ENSMODG00000020353	DDB1	100	89.187	ENSMLEG00000044136	DDB1	100	89.187	Mandrillus_leucophaeus
ENSMODG00000020353	DDB1	100	82.699	ENSMAMG00000014372	ddb1	100	82.699	Mastacembelus_armatus
ENSMODG00000020353	DDB1	100	82.526	ENSMZEG00005013835	ddb1	100	82.526	Maylandia_zebra
ENSMODG00000020353	DDB1	94	87.708	ENSMGAG00000004990	DDB1	89	95.670	Meleagris_gallopavo
ENSMODG00000020353	DDB1	100	89.273	ENSMAUG00000012926	Ddb1	100	89.273	Mesocricetus_auratus
ENSMODG00000020353	DDB1	100	89.187	ENSMICG00000013703	DDB1	100	89.187	Microcebus_murinus
ENSMODG00000020353	DDB1	100	89.187	ENSMOCG00000020499	Ddb1	100	89.187	Microtus_ochrogaster
ENSMODG00000020353	DDB1	85	82.604	ENSMMOG00000001758	ddb1	99	82.604	Mola_mola
ENSMODG00000020353	DDB1	100	82.612	ENSMALG00000014071	ddb1	100	82.612	Monopterus_albus
ENSMODG00000020353	DDB1	100	89.273	MGP_CAROLIEiJ_G0022695	Ddb1	100	89.273	Mus_caroli
ENSMODG00000020353	DDB1	100	89.273	ENSMUSG00000024740	Ddb1	100	89.273	Mus_musculus
ENSMODG00000020353	DDB1	100	89.273	MGP_PahariEiJ_G0014189	Ddb1	100	89.273	Mus_pahari
ENSMODG00000020353	DDB1	100	89.360	MGP_SPRETEiJ_G0023609	Ddb1	100	89.360	Mus_spretus
ENSMODG00000020353	DDB1	100	86.073	ENSMPUG00000014200	DDB1	100	86.073	Mustela_putorius_furo
ENSMODG00000020353	DDB1	100	89.524	ENSMLUG00000013232	DDB1	100	89.524	Myotis_lucifugus
ENSMODG00000020353	DDB1	100	89.100	ENSNGAG00000009384	Ddb1	100	89.100	Nannospalax_galili
ENSMODG00000020353	DDB1	100	82.699	ENSNBRG00000019581	ddb1	100	82.699	Neolamprologus_brichardi
ENSMODG00000020353	DDB1	100	86.301	ENSNLEG00000002022	DDB1	100	86.301	Nomascus_leucogenys
ENSMODG00000020353	DDB1	91	94.949	ENSMEUG00000001099	DDB1	93	94.949	Notamacropus_eugenii
ENSMODG00000020353	DDB1	90	83.046	ENSOPRG00000008254	DDB1	84	87.835	Ochotona_princeps
ENSMODG00000020353	DDB1	100	88.495	ENSODEG00000002419	DDB1	100	88.495	Octodon_degus
ENSMODG00000020353	DDB1	100	82.612	ENSONIG00000005804	ddb1	100	82.612	Oreochromis_niloticus
ENSMODG00000020353	DDB1	84	96.701	ENSOANG00000004897	DDB1	93	96.701	Ornithorhynchus_anatinus
ENSMODG00000020353	DDB1	100	89.360	ENSOCUG00000001667	DDB1	100	89.360	Oryctolagus_cuniculus
ENSMODG00000020353	DDB1	93	83.101	ENSORLG00000001399	ddb1	98	82.759	Oryzias_latipes
ENSMODG00000020353	DDB1	93	83.008	ENSORLG00020001277	ddb1	95	83.008	Oryzias_latipes_hni
ENSMODG00000020353	DDB1	93	83.101	ENSORLG00015002080	ddb1	99	83.101	Oryzias_latipes_hsok
ENSMODG00000020353	DDB1	95	82.081	ENSOMEG00000006181	ddb1	99	82.081	Oryzias_melastigma
ENSMODG00000020353	DDB1	100	89.273	ENSOGAG00000016103	DDB1	100	89.273	Otolemur_garnettii
ENSMODG00000020353	DDB1	99	89.113	ENSOARG00000011716	DDB1	98	89.113	Ovis_aries
ENSMODG00000020353	DDB1	100	89.187	ENSPPAG00000035343	DDB1	100	89.187	Pan_paniscus
ENSMODG00000020353	DDB1	100	89.273	ENSPPRG00000013300	DDB1	100	89.273	Panthera_pardus
ENSMODG00000020353	DDB1	98	89.075	ENSPTIG00000006909	DDB1	98	89.075	Panthera_tigris_altaica
ENSMODG00000020353	DDB1	100	89.187	ENSPTRG00000003737	DDB1	100	89.187	Pan_troglodytes
ENSMODG00000020353	DDB1	100	89.187	ENSPANG00000000242	DDB1	100	89.187	Papio_anubis
ENSMODG00000020353	DDB1	93	83.395	ENSPKIG00000019213	ddb1	94	83.395	Paramormyrops_kingsleyae
ENSMODG00000020353	DDB1	98	87.719	ENSPSIG00000013275	DDB1	100	87.719	Pelodiscus_sinensis
ENSMODG00000020353	DDB1	85	82.485	ENSPMGG00000021179	ddb1	99	82.485	Periophthalmus_magnuspinnatus
ENSMODG00000020353	DDB1	100	89.273	ENSPEMG00000012241	Ddb1	100	89.273	Peromyscus_maniculatus_bairdii
ENSMODG00000020353	DDB1	88	78.333	ENSPMAG00000008479	ddb1	100	78.180	Petromyzon_marinus
ENSMODG00000020353	DDB1	100	89.533	ENSPCIG00000002643	DDB1	100	89.533	Phascolarctos_cinereus
ENSMODG00000020353	DDB1	100	82.266	ENSPFOG00000002768	ddb1	100	82.266	Poecilia_formosa
ENSMODG00000020353	DDB1	100	82.007	ENSPLAG00000017227	ddb1	100	82.007	Poecilia_latipinna
ENSMODG00000020353	DDB1	100	82.007	ENSPMEG00000011398	ddb1	100	82.007	Poecilia_mexicana
ENSMODG00000020353	DDB1	94	83.010	ENSPREG00000004440	ddb1	98	83.010	Poecilia_reticulata
ENSMODG00000020353	DDB1	100	85.147	ENSPPYG00000003193	DDB1	100	85.147	Pongo_abelii
ENSMODG00000020353	DDB1	85	96.047	ENSPCAG00000011040	DDB1	85	96.047	Procavia_capensis
ENSMODG00000020353	DDB1	100	88.083	ENSPCOG00000015176	DDB1	100	88.083	Propithecus_coquereli
ENSMODG00000020353	DDB1	100	89.100	ENSPVAG00000003847	DDB1	100	89.100	Pteropus_vampyrus
ENSMODG00000020353	DDB1	50	89.104	ENSPNYG00000010482	ddb1	100	89.104	Pundamilia_nyererei
ENSMODG00000020353	DDB1	93	82.886	ENSPNAG00000006635	ddb1	97	82.886	Pygocentrus_nattereri
ENSMODG00000020353	DDB1	100	89.187	ENSRNOG00000020715	Ddb1	100	89.187	Rattus_norvegicus
ENSMODG00000020353	DDB1	100	89.187	ENSRBIG00000033611	DDB1	100	89.187	Rhinopithecus_bieti
ENSMODG00000020353	DDB1	100	89.187	ENSRROG00000041407	DDB1	100	89.187	Rhinopithecus_roxellana
ENSMODG00000020353	DDB1	100	89.273	ENSSBOG00000019775	DDB1	100	89.273	Saimiri_boliviensis_boliviensis
ENSMODG00000020353	DDB1	94	87.153	ENSSHAG00000011600	DDB1	99	87.153	Sarcophilus_harrisii
ENSMODG00000020353	DDB1	93	83.658	ENSSFOG00015011151	ddb1	97	83.658	Scleropages_formosus
ENSMODG00000020353	DDB1	100	82.353	ENSSMAG00000009495	ddb1	100	82.353	Scophthalmus_maximus
ENSMODG00000020353	DDB1	100	82.526	ENSSDUG00000004642	ddb1	100	82.526	Seriola_dumerili
ENSMODG00000020353	DDB1	100	82.526	ENSSLDG00000015804	ddb1	100	82.526	Seriola_lalandi_dorsalis
ENSMODG00000020353	DDB1	55	100.000	ENSSARG00000003290	-	55	100.000	Sorex_araneus
ENSMODG00000020353	DDB1	100	88.322	ENSSPUG00000019338	DDB1	100	88.322	Sphenodon_punctatus
ENSMODG00000020353	DDB1	93	83.565	ENSSPAG00000009888	ddb1	99	83.565	Stegastes_partitus
ENSMODG00000020353	DDB1	100	88.322	ENSSSCG00000013094	DDB1	100	88.322	Sus_scrofa
ENSMODG00000020353	DDB1	100	87.716	ENSTGUG00000006414	DDB1	100	87.716	Taeniopygia_guttata
ENSMODG00000020353	DDB1	94	81.818	ENSTRUG00000016682	ddb1	99	81.818	Takifugu_rubripes
ENSMODG00000020353	DDB1	84	83.848	ENSTNIG00000009565	ddb1	96	83.848	Tetraodon_nigroviridis
ENSMODG00000020353	DDB1	92	92.041	ENSTTRG00000011055	DDB1	94	92.041	Tursiops_truncatus
ENSMODG00000020353	DDB1	93	89.786	ENSUAMG00000017793	DDB1	93	89.786	Ursus_americanus
ENSMODG00000020353	DDB1	93	89.786	ENSUMAG00000011788	DDB1	98	89.786	Ursus_maritimus
ENSMODG00000020353	DDB1	90	87.826	ENSVPAG00000007963	DDB1	92	87.826	Vicugna_pacos
ENSMODG00000020353	DDB1	100	89.187	ENSVVUG00000004987	DDB1	100	89.187	Vulpes_vulpes
ENSMODG00000020353	DDB1	100	83.793	ENSXETG00000008820	ddb1	100	83.793	Xenopus_tropicalis
ENSMODG00000020353	DDB1	85	82.299	ENSXCOG00000013956	ddb1	99	82.299	Xiphophorus_couchianus
ENSMODG00000020353	DDB1	93	82.947	ENSXMAG00000000022	ddb1	99	82.947	Xiphophorus_maculatus