EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSMODG00000020364 (Gene tree)
Gene ID
100027234
Gene Symbol
CPSF7
Alias
CFIM59|FLJ12529
Full Name
cleavage and polyadenylation specific factor 7
Gene Type
protein_coding
Species
Monodelphis_domestica
Status
putative
Strand
Minus strand
Length
14854 bases
Position
chr5:299463426-299478279
Accession
100027234
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSMODP00000033409RRM_1PF00076.221.8e-0611
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSMODT00000034985CPSF7-2011746-ENSMODP00000033409486 (aa)XP_007497687F6XYP6
Gene Model
Click here to download ENSMODG00000020364's gene model file
Pathways
Pathway IDPathway NameSource
mdo03015mRNA surveillance pathwayKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSMODG00000020364's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSMODG00000020364CPSF77256.250ENSMODG00000007123CPSF66552.284
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSMODG00000020364CPSF79790.021ENSG00000149532CPSF710091.724Homo_sapiens
ENSMODG00000020364CPSF77256.250ENSG00000111605CPSF68843.000Homo_sapiens
ENSMODG00000020364CPSF79690.503ENSAMEG00000016595CPSF78690.503Ailuropoda_melanoleuca
ENSMODG00000020364CPSF77256.250ENSAMEG00000011781CPSF66549.020Ailuropoda_melanoleuca
ENSMODG00000020364CPSF77256.818ENSACIG00000018413cpsf66252.041Amphilophus_citrinellus
ENSMODG00000020364CPSF77256.818ENSAOCG00000017865cpsf66551.531Amphiprion_ocellaris
ENSMODG00000020364CPSF79684.144ENSANAG00000024635CPSF79684.144Aotus_nancymaae
ENSMODG00000020364CPSF76956.250ENSANAG00000019240CPSF66352.284Aotus_nancymaae
ENSMODG00000020364CPSF77256.818ENSACLG00000026325cpsf66152.041Astatotilapia_calliptera
ENSMODG00000020364CPSF79789.809ENSBTAG00000015263CPSF79789.809Bos_taurus
ENSMODG00000020364CPSF77256.250ENSBTAG00000007323CPSF66552.284Bos_taurus
ENSMODG00000020364CPSF77257.386ENSCJAG00000001798CPSF66552.284Callithrix_jacchus
ENSMODG00000020364CPSF79790.021ENSCJAG00000019282CPSF79991.342Callithrix_jacchus
ENSMODG00000020364CPSF79790.446ENSCAFG00000016152CPSF79790.446Canis_familiaris
ENSMODG00000020364CPSF76956.250ENSCAFG00000000424CPSF66252.284Canis_familiaris
ENSMODG00000020364CPSF77256.250ENSCAFG00020016950CPSF66552.284Canis_lupus_dingo
ENSMODG00000020364CPSF79790.446ENSCAFG00020012753CPSF79790.446Canis_lupus_dingo
ENSMODG00000020364CPSF79789.809ENSCHIG00000014655CPSF79789.809Capra_hircus
ENSMODG00000020364CPSF77256.250ENSCHIG00000010792CPSF66552.284Capra_hircus
ENSMODG00000020364CPSF79790.234ENSTSYG00000010138-9790.234Carlito_syrichta
ENSMODG00000020364CPSF76957.386ENSTSYG00000008591CPSF66152.284Carlito_syrichta
ENSMODG00000020364CPSF79388.300ENSCAPG00000006384CPSF79788.300Cavia_aperea
ENSMODG00000020364CPSF79788.747ENSCPOG00000009980CPSF79788.747Cavia_porcellus
ENSMODG00000020364CPSF77256.250ENSCPOG00000015201CPSF66552.284Cavia_porcellus
ENSMODG00000020364CPSF77257.386ENSCCAG00000028149CPSF66552.284Cebus_capucinus
ENSMODG00000020364CPSF79790.021ENSCCAG00000032367CPSF79790.021Cebus_capucinus
ENSMODG00000020364CPSF77256.250ENSCATG00000039288CPSF66552.284Cercocebus_atys
ENSMODG00000020364CPSF79790.021ENSCATG00000042801CPSF79790.021Cercocebus_atys
ENSMODG00000020364CPSF77157.386ENSCLAG00000010149CPSF66452.792Chinchilla_lanigera
ENSMODG00000020364CPSF79788.535ENSCLAG00000003174CPSF79788.535Chinchilla_lanigera
ENSMODG00000020364CPSF79788.110ENSCSAG00000006414CPSF79788.110Chlorocebus_sabaeus
ENSMODG00000020364CPSF77250.246ENSCPBG00000013322CPSF66552.284Chrysemys_picta_bellii
ENSMODG00000020364CPSF76856.250ENSCANG00000037294CPSF66352.284Colobus_angolensis_palliatus
ENSMODG00000020364CPSF79789.384ENSCGRG00001020382Cpsf79789.384Cricetulus_griseus_chok1gshd
ENSMODG00000020364CPSF77257.386ENSCGRG00001018082Cpsf66552.792Cricetulus_griseus_chok1gshd
ENSMODG00000020364CPSF77157.386ENSCGRG00000016909Cpsf66452.792Cricetulus_griseus_crigri
ENSMODG00000020364CPSF79788.323ENSCGRG00000017954Cpsf79788.323Cricetulus_griseus_crigri
ENSMODG00000020364CPSF76364.394ENSCSEG00000008967cpsf66851.531Cynoglossus_semilaevis
ENSMODG00000020364CPSF77254.098ENSCVAG00000014857cpsf66551.485Cyprinodon_variegatus
ENSMODG00000020364CPSF79790.021ENSDNOG00000018517CPSF79990.909Dasypus_novemcinctus
ENSMODG00000020364CPSF77257.386ENSDNOG00000015292CPSF66552.792Dasypus_novemcinctus
ENSMODG00000020364CPSF76857.386ENSDORG00000002950Cpsf66252.792Dipodomys_ordii
ENSMODG00000020364CPSF79787.473ENSETEG00000003765CPSF79787.473Echinops_telfairi
ENSMODG00000020364CPSF75861.798ENSETEG00000002097CPSF66247.027Echinops_telfairi
ENSMODG00000020364CPSF79790.021ENSEASG00005008196CPSF79790.021Equus_asinus_asinus
ENSMODG00000020364CPSF77256.250ENSEASG00005008066CPSF66552.284Equus_asinus_asinus
ENSMODG00000020364CPSF77256.250ENSECAG00000015988CPSF66552.284Equus_caballus
ENSMODG00000020364CPSF78887.083ENSECAG00000018521CPSF79987.446Equus_caballus
ENSMODG00000020364CPSF76292.121ENSEEUG00000005966-7192.121Erinaceus_europaeus
ENSMODG00000020364CPSF79790.446ENSFCAG00000013677CPSF79790.446Felis_catus
ENSMODG00000020364CPSF77256.250ENSFCAG00000002855CPSF66552.284Felis_catus
ENSMODG00000020364CPSF79775.159ENSFALG00000011927CPSF79674.522Ficedula_albicollis
ENSMODG00000020364CPSF76957.386ENSFALG00000010157CPSF66452.792Ficedula_albicollis
ENSMODG00000020364CPSF77156.250ENSFDAG00000002281CPSF66352.551Fukomys_damarensis
ENSMODG00000020364CPSF79788.110ENSFDAG00000003919CPSF79788.110Fukomys_damarensis
ENSMODG00000020364CPSF77251.295ENSFHEG00000019693cpsf66351.961Fundulus_heteroclitus
ENSMODG00000020364CPSF76064.167ENSGMOG00000012951cpsf65356.800Gadus_morhua
ENSMODG00000020364CPSF79784.289ENSGALG00000040962CPSF78384.289Gallus_gallus
ENSMODG00000020364CPSF76364.394ENSGACG00000019685cpsf66551.020Gasterosteus_aculeatus
ENSMODG00000020364CPSF77250.246ENSGAGG00000010228CPSF66552.284Gopherus_agassizii
ENSMODG00000020364CPSF77257.386ENSGGOG00000008211CPSF66552.792Gorilla_gorilla
ENSMODG00000020364CPSF77256.818ENSHBUG00000005998cpsf66552.041Haplochromis_burtoni
ENSMODG00000020364CPSF77256.250ENSHGLG00000000792CPSF66552.284Heterocephalus_glaber_female
ENSMODG00000020364CPSF79786.837ENSHGLG00000019090-9786.837Heterocephalus_glaber_female
ENSMODG00000020364CPSF77256.250ENSHGLG00100013861CPSF66452.284Heterocephalus_glaber_male
ENSMODG00000020364CPSF79785.563ENSHGLG00100013933-9784.713Heterocephalus_glaber_male
ENSMODG00000020364CPSF76558.333ENSHCOG00000014555cpsf66650.761Hippocampus_comes
ENSMODG00000020364CPSF76857.386ENSSTOG00000014133CPSF66352.792Ictidomys_tridecemlineatus
ENSMODG00000020364CPSF79790.021ENSSTOG00000007708CPSF79790.021Ictidomys_tridecemlineatus
ENSMODG00000020364CPSF76857.386ENSJJAG00000014647Cpsf66352.792Jaculus_jaculus
ENSMODG00000020364CPSF79788.110ENSJJAG00000019390Cpsf79788.110Jaculus_jaculus
ENSMODG00000020364CPSF77251.042ENSKMAG00000014794cpsf66551.531Kryptolebias_marmoratus
ENSMODG00000020364CPSF76960.606ENSLBEG00000015762cpsf66151.531Labrus_bergylta
ENSMODG00000020364CPSF79849.375ENSLACG00000005542CPSF79746.809Latimeria_chalumnae
ENSMODG00000020364CPSF77257.377ENSLACG00000008625CPSF66552.284Latimeria_chalumnae
ENSMODG00000020364CPSF77257.062ENSLOCG00000016190cpsf66152.308Lepisosteus_oculatus
ENSMODG00000020364CPSF79790.234ENSLAFG00000032084CPSF79790.234Loxodonta_africana
ENSMODG00000020364CPSF77256.250ENSLAFG00000030413CPSF66552.284Loxodonta_africana
ENSMODG00000020364CPSF79790.021ENSMFAG00000001401CPSF79790.021Macaca_fascicularis
ENSMODG00000020364CPSF77257.386ENSMFAG00000045318CPSF66552.284Macaca_fascicularis
ENSMODG00000020364CPSF77257.386ENSMMUG00000002921CPSF66552.792Macaca_mulatta
ENSMODG00000020364CPSF79790.021ENSMMUG00000015280CPSF79790.021Macaca_mulatta
ENSMODG00000020364CPSF79788.110ENSMNEG00000029585CPSF79788.110Macaca_nemestrina
ENSMODG00000020364CPSF77257.386ENSMNEG00000036311CPSF66552.284Macaca_nemestrina
ENSMODG00000020364CPSF76856.250ENSMLEG00000003957CPSF66352.284Mandrillus_leucophaeus
ENSMODG00000020364CPSF79790.021ENSMLEG00000031269CPSF79687.366Mandrillus_leucophaeus
ENSMODG00000020364CPSF77256.818ENSMAMG00000010385cpsf66551.531Mastacembelus_armatus
ENSMODG00000020364CPSF77256.818ENSMZEG00005007975cpsf66552.041Maylandia_zebra
ENSMODG00000020364CPSF76856.250ENSMGAG00000010552CPSF66352.284Meleagris_gallopavo
ENSMODG00000020364CPSF77256.250ENSMAUG00000013240Cpsf66552.284Mesocricetus_auratus
ENSMODG00000020364CPSF79789.597ENSMAUG00000013020Cpsf79789.597Mesocricetus_auratus
ENSMODG00000020364CPSF79790.234ENSMICG00000013788CPSF79790.234Microcebus_murinus
ENSMODG00000020364CPSF77257.386ENSMICG00000007385-6552.792Microcebus_murinus
ENSMODG00000020364CPSF77257.386ENSMOCG00000013982Cpsf66552.792Microtus_ochrogaster
ENSMODG00000020364CPSF79789.384ENSMOCG00000000072Cpsf79789.384Microtus_ochrogaster
ENSMODG00000020364CPSF77256.818ENSMALG00000014908cpsf67151.531Monopterus_albus
ENSMODG00000020364CPSF77257.386MGP_CAROLIEiJ_G0015834Cpsf66552.792Mus_caroli
ENSMODG00000020364CPSF79789.384MGP_CAROLIEiJ_G0022690Cpsf79789.384Mus_caroli
ENSMODG00000020364CPSF77257.386ENSMUSG00000055531Cpsf66552.792Mus_musculus
ENSMODG00000020364CPSF79789.384ENSMUSG00000034820Cpsf79789.384Mus_musculus
ENSMODG00000020364CPSF77248.603MGP_PahariEiJ_G0031253Cpsf65452.830Mus_pahari
ENSMODG00000020364CPSF79789.384MGP_PahariEiJ_G0014184Cpsf79789.384Mus_pahari
ENSMODG00000020364CPSF79789.384MGP_SPRETEiJ_G0023604Cpsf79789.384Mus_spretus
ENSMODG00000020364CPSF77257.386MGP_SPRETEiJ_G0016657Cpsf66552.792Mus_spretus
ENSMODG00000020364CPSF77152.660ENSMPUG00000017502CPSF66449.020Mustela_putorius_furo
ENSMODG00000020364CPSF79389.625ENSMPUG00000014163CPSF79289.625Mustela_putorius_furo
ENSMODG00000020364CPSF79787.898ENSMLUG00000013278CPSF79787.898Myotis_lucifugus
ENSMODG00000020364CPSF77452.660ENSMLUG00000004172-6549.020Myotis_lucifugus
ENSMODG00000020364CPSF77257.386ENSNGAG00000015901Cpsf66552.792Nannospalax_galili
ENSMODG00000020364CPSF79789.384ENSNGAG00000005031Cpsf79789.384Nannospalax_galili
ENSMODG00000020364CPSF77256.818ENSNBRG00000004089cpsf66552.041Neolamprologus_brichardi
ENSMODG00000020364CPSF79790.021ENSNLEG00000002529CPSF78990.021Nomascus_leucogenys
ENSMODG00000020364CPSF77257.386ENSNLEG00000003798CPSF66552.284Nomascus_leucogenys
ENSMODG00000020364CPSF710096.091ENSMEUG00000002261CPSF710096.091Notamacropus_eugenii
ENSMODG00000020364CPSF76856.250ENSOPRG00000005199CPSF65952.551Ochotona_princeps
ENSMODG00000020364CPSF77256.497ENSODEG00000018399-6552.792Octodon_degus
ENSMODG00000020364CPSF79787.553ENSODEG00000002610CPSF79787.764Octodon_degus
ENSMODG00000020364CPSF77540.000ENSODEG00000007109-6349.219Octodon_degus
ENSMODG00000020364CPSF77256.818ENSONIG00000011702cpsf66552.041Oreochromis_niloticus
ENSMODG00000020364CPSF75966.667ENSOANG00000005944CPSF65260.800Ornithorhynchus_anatinus
ENSMODG00000020364CPSF79789.384ENSOCUG00000024726CPSF79789.384Oryctolagus_cuniculus
ENSMODG00000020364CPSF77256.250ENSORLG00000013893cpsf66552.041Oryzias_latipes
ENSMODG00000020364CPSF77256.250ENSORLG00020016593cpsf66552.041Oryzias_latipes_hni
ENSMODG00000020364CPSF77256.250ENSORLG00015015558cpsf66552.041Oryzias_latipes_hsok
ENSMODG00000020364CPSF76948.603ENSOMEG00000009425cpsf66552.551Oryzias_melastigma
ENSMODG00000020364CPSF79790.234ENSOGAG00000027958CPSF79090.234Otolemur_garnettii
ENSMODG00000020364CPSF77152.660ENSOGAG00000031988CPSF66449.020Otolemur_garnettii
ENSMODG00000020364CPSF79779.846ENSOARG00000012937CPSF79779.846Ovis_aries
ENSMODG00000020364CPSF77157.386ENSPPAG00000005301CPSF66153.061Pan_paniscus
ENSMODG00000020364CPSF79790.021ENSPPAG00000028232CPSF79689.278Pan_paniscus
ENSMODG00000020364CPSF79790.254ENSPPRG00000008538CPSF79785.563Panthera_pardus
ENSMODG00000020364CPSF77256.250ENSPPRG00000021620CPSF66552.284Panthera_pardus
ENSMODG00000020364CPSF75856.250ENSPTIG00000004079CPSF65852.284Panthera_tigris_altaica
ENSMODG00000020364CPSF79790.446ENSPTIG00000021699CPSF79790.446Panthera_tigris_altaica
ENSMODG00000020364CPSF79790.021ENSPTRG00000003742CPSF79790.021Pan_troglodytes
ENSMODG00000020364CPSF77257.386ENSPTRG00000005205CPSF66552.792Pan_troglodytes
ENSMODG00000020364CPSF79790.021ENSPANG00000006037CPSF79687.366Papio_anubis
ENSMODG00000020364CPSF76266.667ENSPANG00000011641CPSF66552.284Papio_anubis
ENSMODG00000020364CPSF75851.852ENSPSIG00000016360CPSF66851.852Pelodiscus_sinensis
ENSMODG00000020364CPSF76857.386ENSPEMG00000007973Cpsf66352.792Peromyscus_maniculatus_bairdii
ENSMODG00000020364CPSF79789.597ENSPEMG00000012648Cpsf79789.597Peromyscus_maniculatus_bairdii
ENSMODG00000020364CPSF76955.367ENSPMAG00000000657cpsf66154.822Petromyzon_marinus
ENSMODG00000020364CPSF710099.794ENSPCIG00000002551CPSF710099.794Phascolarctos_cinereus
ENSMODG00000020364CPSF77256.250ENSPCIG00000019063CPSF66552.284Phascolarctos_cinereus
ENSMODG00000020364CPSF77251.295ENSPLAG00000005715cpsf66551.961Poecilia_latipinna
ENSMODG00000020364CPSF77251.295ENSPMEG00000001353cpsf66551.961Poecilia_mexicana
ENSMODG00000020364CPSF77251.295ENSPREG00000004417cpsf66549.721Poecilia_reticulata
ENSMODG00000020364CPSF79790.021ENSPPYG00000003188CPSF79790.021Pongo_abelii
ENSMODG00000020364CPSF77256.250ENSPPYG00000004756CPSF66552.284Pongo_abelii
ENSMODG00000020364CPSF79790.234ENSPCOG00000011976CPSF79790.234Propithecus_coquereli
ENSMODG00000020364CPSF77257.386ENSPCOG00000024384CPSF66552.792Propithecus_coquereli
ENSMODG00000020364CPSF79790.021ENSPVAG00000010675CPSF79790.021Pteropus_vampyrus
ENSMODG00000020364CPSF77256.818ENSPNYG00000020315cpsf66152.041Pundamilia_nyererei
ENSMODG00000020364CPSF78645.823ENSPNAG00000015073CPSF78345.125Pygocentrus_nattereri
ENSMODG00000020364CPSF79787.261ENSRNOG00000020668Cpsf79787.261Rattus_norvegicus
ENSMODG00000020364CPSF77256.250ENSRNOG00000005927Cpsf66552.284Rattus_norvegicus
ENSMODG00000020364CPSF79790.021ENSRBIG00000031429CPSF79790.021Rhinopithecus_bieti
ENSMODG00000020364CPSF77257.386ENSRBIG00000042827CPSF66552.792Rhinopithecus_bieti
ENSMODG00000020364CPSF79790.021ENSRROG00000045009CPSF79790.021Rhinopithecus_roxellana
ENSMODG00000020364CPSF77256.250ENSRROG00000042758CPSF66552.284Rhinopithecus_roxellana
ENSMODG00000020364CPSF79790.021ENSSBOG00000018431CPSF79790.021Saimiri_boliviensis_boliviensis
ENSMODG00000020364CPSF77057.386ENSSBOG00000010652CPSF65852.284Saimiri_boliviensis_boliviensis
ENSMODG00000020364CPSF76951.124ENSSHAG00000006635CPSF66347.236Sarcophilus_harrisii
ENSMODG00000020364CPSF710094.033ENSSHAG00000011964CPSF710094.033Sarcophilus_harrisii
ENSMODG00000020364CPSF77356.111ENSSFOG00015001688CPSF65651.269Scleropages_formosus
ENSMODG00000020364CPSF76950.299ENSSFOG00015015803CPSF66652.551Scleropages_formosus
ENSMODG00000020364CPSF76360.606ENSSMAG00000000471cpsf66151.531Scophthalmus_maximus
ENSMODG00000020364CPSF77256.818ENSSDUG00000005024cpsf66551.531Seriola_dumerili
ENSMODG00000020364CPSF77256.818ENSSLDG00000009042cpsf66551.531Seriola_lalandi_dorsalis
ENSMODG00000020364CPSF77256.250ENSSARG00000006743CPSF66152.551Sorex_araneus
ENSMODG00000020364CPSF79787.049ENSSPUG00000019344CPSF79787.049Sphenodon_punctatus
ENSMODG00000020364CPSF77250.490ENSSPUG00000001238CPSF66748.661Sphenodon_punctatus
ENSMODG00000020364CPSF77251.042ENSSPAG00000013906cpsf66551.531Stegastes_partitus
ENSMODG00000020364CPSF77256.250ENSSSCG00000038031CPSF66552.284Sus_scrofa
ENSMODG00000020364CPSF79790.021ENSSSCG00000013083CPSF79991.342Sus_scrofa
ENSMODG00000020364CPSF79782.378ENSTGUG00000006513CPSF79783.227Taeniopygia_guttata
ENSMODG00000020364CPSF77257.386ENSTRUG00000016461cpsf66552.551Takifugu_rubripes
ENSMODG00000020364CPSF76947.486ENSTNIG00000007576cpsf66552.551Tetraodon_nigroviridis
ENSMODG00000020364CPSF79389.625ENSTTRG00000011085CPSF79789.625Tursiops_truncatus
ENSMODG00000020364CPSF75856.250ENSUAMG00000023492CPSF65852.284Ursus_americanus
ENSMODG00000020364CPSF79790.446ENSUAMG00000017809CPSF79790.446Ursus_americanus
ENSMODG00000020364CPSF75856.250ENSUMAG00000020779CPSF65852.284Ursus_maritimus
ENSMODG00000020364CPSF79788.535ENSUMAG00000011825CPSF79788.535Ursus_maritimus
ENSMODG00000020364CPSF79790.446ENSVVUG00000004939CPSF79991.775Vulpes_vulpes
ENSMODG00000020364CPSF79850.654ENSXETG00000006715cpsf710053.571Xenopus_tropicalis
ENSMODG00000020364CPSF77251.295ENSXCOG00000013423cpsf66551.471Xiphophorus_couchianus
ENSMODG00000020364CPSF77251.295ENSXMAG00000003459cpsf66151.471Xiphophorus_maculatus

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