EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMODG00000020561 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Monodelphis_domestica
Status: putative
Strand: Plus strand
Length: 1752 bases
Position: chrX:23545515-23547266
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMODP00000025722	RRM_5	PF13893.6	1.7e-06	1	1
ENSMODP00000025722	RRM_1	PF00076.22	1.6e-40	1	3
ENSMODP00000025722	RRM_1	PF00076.22	1.6e-40	2	3
ENSMODP00000025722	RRM_1	PF00076.22	1.6e-40	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMODT00000026180	-	1752	-	ENSMODP00000025722	583 (aa)	-	F7APN8

Gene Model

Click here to download ENSMODG00000020561's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMODG00000020561's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMODG00000020561	-	53	86.943	ENSMODG00000015426	-	98	86.943
ENSMODG00000020561	-	52	54.341	ENSMODG00000016144	HNRNPR	61	46.324
ENSMODG00000020561	-	54	68.671	ENSMODG00000001302	RBM46	54	68.671
ENSMODG00000020561	-	52	53.398	ENSMODG00000000609	-	57	52.038
ENSMODG00000020561	-	52	48.220	ENSMODG00000018345	-	54	47.022
ENSMODG00000020561	-	72	56.404	ENSMODG00000016478	A1CF	80	56.561
ENSMODG00000020561	-	100	86.655	ENSMODG00000007003	RBM47	100	86.318

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMODG00000020561	-	100	80.438	ENSG00000163694	RBM47	100	87.558	Homo_sapiens
ENSMODG00000020561	-	100	73.289	ENSAPOG00000011062	rbm47	100	75.426	Acanthochromis_polyacanthus
ENSMODG00000020561	-	97	81.076	ENSAMEG00000009672	RBM47	100	81.376	Ailuropoda_melanoleuca
ENSMODG00000020561	-	100	72.651	ENSACIG00000011531	rbm47	100	73.322	Amphilophus_citrinellus
ENSMODG00000020561	-	100	73.322	ENSAOCG00000022245	rbm47	100	75.426	Amphiprion_ocellaris
ENSMODG00000020561	-	100	73.445	ENSAPEG00000018304	rbm47	100	75.426	Amphiprion_percula
ENSMODG00000020561	-	100	72.982	ENSATEG00000018400	rbm47	100	72.817	Anabas_testudineus
ENSMODG00000020561	-	100	79.933	ENSAPLG00000013974	RBM47	100	80.438	Anas_platyrhynchos
ENSMODG00000020561	-	100	78.130	ENSACAG00000011833	RBM47	100	78.130	Anolis_carolinensis
ENSMODG00000020561	-	100	80.776	ENSANAG00000029440	RBM47	100	81.726	Aotus_nancymaae
ENSMODG00000020561	-	100	71.311	ENSACLG00000016902	rbm47	100	78.811	Astatotilapia_calliptera
ENSMODG00000020561	-	96	74.650	ENSAMXG00000021794	rbm47	100	72.112	Astyanax_mexicanus
ENSMODG00000020561	-	100	82.234	ENSBTAG00000002356	RBM47	100	81.895	Bos_taurus
ENSMODG00000020561	-	97	81.818	ENSCJAG00000019385	RBM47	100	81.980	Callithrix_jacchus
ENSMODG00000020561	-	96	82.777	ENSCAFG00000015898	RBM47	100	82.293	Canis_familiaris
ENSMODG00000020561	-	89	78.571	ENSCAFG00020010558	RBM47	94	81.360	Canis_lupus_dingo
ENSMODG00000020561	-	100	82.403	ENSCHIG00000026214	RBM47	100	82.064	Capra_hircus
ENSMODG00000020561	-	86	82.301	ENSTSYG00000033612	RBM47	93	82.301	Carlito_syrichta
ENSMODG00000020561	-	100	74.155	ENSCAPG00000008426	RBM47	100	75.169	Cavia_aperea
ENSMODG00000020561	-	100	79.730	ENSCPOG00000014100	RBM47	100	81.266	Cavia_porcellus
ENSMODG00000020561	-	100	81.154	ENSCCAG00000030129	-	100	81.980	Cebus_capucinus
ENSMODG00000020561	-	99	57.216	ENSCCAG00000024397	-	99	57.046	Cebus_capucinus
ENSMODG00000020561	-	100	81.431	ENSCATG00000042064	RBM47	100	81.980	Cercocebus_atys
ENSMODG00000020561	-	100	80.372	ENSCLAG00000001684	RBM47	100	86.076	Chinchilla_lanigera
ENSMODG00000020561	-	100	80.607	ENSCSAG00000017060	RBM47	100	80.776	Chlorocebus_sabaeus
ENSMODG00000020561	-	85	79.147	ENSCHOG00000011731	RBM47	88	78.104	Choloepus_hoffmanni
ENSMODG00000020561	-	100	82.215	ENSCPBG00000013831	RBM47	100	82.215	Chrysemys_picta_bellii
ENSMODG00000020561	-	97	82.892	ENSCANG00000019997	RBM47	100	81.980	Colobus_angolensis_palliatus
ENSMODG00000020561	-	100	79.530	ENSCGRG00001000623	-	100	84.309	Cricetulus_griseus_chok1gshd
ENSMODG00000020561	-	88	80.053	ENSCGRG00001020102	-	99	80.053	Cricetulus_griseus_chok1gshd
ENSMODG00000020561	-	88	79.787	ENSCGRG00000014760	-	99	79.787	Cricetulus_griseus_crigri
ENSMODG00000020561	-	100	78.691	ENSCGRG00000007762	-	100	84.810	Cricetulus_griseus_crigri
ENSMODG00000020561	-	96	73.124	ENSCSEG00000004545	rbm47	100	72.529	Cynoglossus_semilaevis
ENSMODG00000020561	-	96	73.730	ENSCVAG00000020144	rbm47	100	78.772	Cyprinodon_variegatus
ENSMODG00000020561	-	96	76.182	ENSDARG00000061985	rbm47	100	72.185	Danio_rerio
ENSMODG00000020561	-	100	81.494	ENSDNOG00000046854	RBM47	100	82.003	Dasypus_novemcinctus
ENSMODG00000020561	-	100	80.737	ENSDORG00000010144	Rbm47	100	80.402	Dipodomys_ordii
ENSMODG00000020561	-	100	80.168	ENSETEG00000009194	RBM47	100	80.336	Echinops_telfairi
ENSMODG00000020561	-	95	57.491	ENSEBUG00000011912	rbm47	96	57.840	Eptatretus_burgeri
ENSMODG00000020561	-	97	82.487	ENSEASG00005008443	RBM47	100	82.064	Equus_asinus_asinus
ENSMODG00000020561	-	97	82.487	ENSECAG00000004400	RBM47	100	82.064	Equus_caballus
ENSMODG00000020561	-	72	90.476	ENSEEUG00000001194	RBM47	75	87.879	Erinaceus_europaeus
ENSMODG00000020561	-	96	73.868	ENSELUG00000006148	rbm47	93	79.521	Esox_lucius
ENSMODG00000020561	-	100	82.003	ENSFCAG00000012399	RBM47	100	82.343	Felis_catus
ENSMODG00000020561	-	100	80.504	ENSFALG00000002861	RBM47	100	81.008	Ficedula_albicollis
ENSMODG00000020561	-	100	79.153	ENSFDAG00000016326	RBM47	100	79.153	Fukomys_damarensis
ENSMODG00000020561	-	98	73.666	ENSFHEG00000007938	rbm47	99	73.150	Fundulus_heteroclitus
ENSMODG00000020561	-	99	70.443	ENSGMOG00000014802	rbm47	99	70.279	Gadus_morhua
ENSMODG00000020561	-	63	85.904	ENSGALG00000014267	RBM47	99	86.968	Gallus_gallus
ENSMODG00000020561	-	61	82.320	ENSGAFG00000020571	rbm47	95	82.320	Gambusia_affinis
ENSMODG00000020561	-	100	69.951	ENSGACG00000016223	rbm47	100	74.939	Gasterosteus_aculeatus
ENSMODG00000020561	-	100	82.215	ENSGAGG00000020051	RBM47	100	82.215	Gopherus_agassizii
ENSMODG00000020561	-	100	81.431	ENSGGOG00000001367	RBM47	100	81.980	Gorilla_gorilla
ENSMODG00000020561	-	100	71.242	ENSHBUG00000003520	rbm47	100	78.811	Haplochromis_burtoni
ENSMODG00000020561	-	84	68.293	ENSHGLG00000016914	RBM47	100	84.177	Heterocephalus_glaber_female
ENSMODG00000020561	-	100	71.695	ENSHGLG00100003071	-	100	71.695	Heterocephalus_glaber_male
ENSMODG00000020561	-	100	79.153	ENSHGLG00100014028	-	100	84.177	Heterocephalus_glaber_male
ENSMODG00000020561	-	99	72.635	ENSHCOG00000002074	rbm47	99	75.366	Hippocampus_comes
ENSMODG00000020561	-	99	75.086	ENSIPUG00000004743	rbm47	100	74.055	Ictalurus_punctatus
ENSMODG00000020561	-	100	79.832	ENSSTOG00000004727	RBM47	100	84.177	Ictidomys_tridecemlineatus
ENSMODG00000020561	-	97	82.056	ENSJJAG00000013823	Rbm47	100	80.537	Jaculus_jaculus
ENSMODG00000020561	-	100	73.199	ENSKMAG00000000084	rbm47	100	78.061	Kryptolebias_marmoratus
ENSMODG00000020561	-	100	72.589	ENSLBEG00000008436	rbm47	100	76.350	Labrus_bergylta
ENSMODG00000020561	-	100	78.003	ENSLACG00000007196	RBM47	100	77.496	Latimeria_chalumnae
ENSMODG00000020561	-	100	78.680	ENSLOCG00000012966	rbm47	95	77.496	Lepisosteus_oculatus
ENSMODG00000020561	-	100	80.640	ENSLAFG00000011998	RBM47	100	80.976	Loxodonta_africana
ENSMODG00000020561	-	100	81.431	ENSMFAG00000037967	RBM47	100	81.980	Macaca_fascicularis
ENSMODG00000020561	-	100	80.607	ENSMMUG00000012036	RBM47	100	86.528	Macaca_mulatta
ENSMODG00000020561	-	100	81.601	ENSMNEG00000040774	RBM47	100	82.234	Macaca_nemestrina
ENSMODG00000020561	-	97	89.492	ENSMLEG00000041432	RBM47	100	86.984	Mandrillus_leucophaeus
ENSMODG00000020561	-	100	73.267	ENSMAMG00000019143	rbm47	100	76.471	Mastacembelus_armatus
ENSMODG00000020561	-	100	71.311	ENSMZEG00005023659	rbm47	100	71.639	Maylandia_zebra
ENSMODG00000020561	-	100	80.100	ENSMGAG00000012226	RBM47	100	80.602	Meleagris_gallopavo
ENSMODG00000020561	-	100	79.664	ENSMAUG00000006493	Rbm47	100	84.810	Mesocricetus_auratus
ENSMODG00000020561	-	100	79.487	ENSMICG00000026417	RBM47	100	79.829	Microcebus_murinus
ENSMODG00000020561	-	100	80.471	ENSMOCG00000021170	Rbm47	100	86.076	Microtus_ochrogaster
ENSMODG00000020561	-	100	71.358	ENSMMOG00000007260	rbm47	100	71.358	Mola_mola
ENSMODG00000020561	-	100	72.466	ENSMALG00000005167	rbm47	100	75.306	Monopterus_albus
ENSMODG00000020561	-	100	80.101	MGP_CAROLIEiJ_G0027258	Rbm47	100	84.810	Mus_caroli
ENSMODG00000020561	-	100	80.270	ENSMUSG00000070780	Rbm47	100	84.810	Mus_musculus
ENSMODG00000020561	-	100	80.270	MGP_PahariEiJ_G0017040	Rbm47	100	85.443	Mus_pahari
ENSMODG00000020561	-	100	80.508	MGP_SPRETEiJ_G0028253	Rbm47	100	84.810	Mus_spretus
ENSMODG00000020561	-	97	82.199	ENSMPUG00000006177	RBM47	94	81.619	Mustela_putorius_furo
ENSMODG00000020561	-	100	80.711	ENSMLUG00000000889	RBM47	100	80.372	Myotis_lucifugus
ENSMODG00000020561	-	100	79.832	ENSNGAG00000003325	Rbm47	100	80.000	Nannospalax_galili
ENSMODG00000020561	-	100	71.522	ENSNBRG00000015092	rbm47	100	72.177	Neolamprologus_brichardi
ENSMODG00000020561	-	100	81.090	ENSNLEG00000017151	RBM47	100	81.980	Nomascus_leucogenys
ENSMODG00000020561	-	73	83.450	ENSMEUG00000009516	-	100	83.450	Notamacropus_eugenii
ENSMODG00000020561	-	75	85.417	ENSOPRG00000016507	-	75	85.417	Ochotona_princeps
ENSMODG00000020561	-	100	79.865	ENSODEG00000004873	RBM47	100	81.387	Octodon_degus
ENSMODG00000020561	-	100	71.639	ENSONIG00000009061	rbm47	100	71.475	Oreochromis_niloticus
ENSMODG00000020561	-	100	81.849	ENSOANG00000008978	RBM47	100	81.513	Ornithorhynchus_anatinus
ENSMODG00000020561	-	100	82.234	ENSOCUG00000012034	RBM47	100	81.895	Oryctolagus_cuniculus
ENSMODG00000020561	-	100	73.187	ENSORLG00000005847	rbm47	100	75.550	Oryzias_latipes
ENSMODG00000020561	-	100	73.356	ENSORLG00020005154	rbm47	100	75.550	Oryzias_latipes_hni
ENSMODG00000020561	-	100	73.862	ENSORLG00015000066	rbm47	100	75.795	Oryzias_latipes_hsok
ENSMODG00000020561	-	100	75.169	ENSOMEG00000010730	rbm47	100	74.493	Oryzias_melastigma
ENSMODG00000020561	-	100	80.776	ENSOGAG00000029367	-	100	81.282	Otolemur_garnettii
ENSMODG00000020561	-	100	75.722	ENSOGAG00000025193	-	100	75.722	Otolemur_garnettii
ENSMODG00000020561	-	100	74.112	ENSOARG00000012711	RBM47	100	74.281	Ovis_aries
ENSMODG00000020561	-	100	81.261	ENSPPAG00000029763	RBM47	100	81.601	Pan_paniscus
ENSMODG00000020561	-	97	80.492	ENSPPRG00000012873	RBM47	100	85.333	Panthera_pardus
ENSMODG00000020561	-	85	78.758	ENSPTIG00000017046	RBM47	100	79.760	Panthera_tigris_altaica
ENSMODG00000020561	-	100	81.431	ENSPTRG00000016006	RBM47	100	81.980	Pan_troglodytes
ENSMODG00000020561	-	100	81.431	ENSPANG00000005980	RBM47	100	81.980	Papio_anubis
ENSMODG00000020561	-	85	83.239	ENSPKIG00000013431	RBM47	98	78.442	Paramormyrops_kingsleyae
ENSMODG00000020561	-	96	73.158	ENSPKIG00000005037	rbm47	100	70.184	Paramormyrops_kingsleyae
ENSMODG00000020561	-	89	83.523	ENSPSIG00000017516	RBM47	97	83.144	Pelodiscus_sinensis
ENSMODG00000020561	-	96	72.535	ENSPMGG00000018540	rbm47	100	71.332	Periophthalmus_magnuspinnatus
ENSMODG00000020561	-	100	80.336	ENSPEMG00000011088	Rbm47	100	81.566	Peromyscus_maniculatus_bairdii
ENSMODG00000020561	-	96	74.479	ENSPFOG00000007997	rbm47	100	71.173	Poecilia_formosa
ENSMODG00000020561	-	96	74.087	ENSPLAG00000002072	rbm47	99	81.543	Poecilia_latipinna
ENSMODG00000020561	-	98	74.232	ENSPMEG00000017492	rbm47	100	78.005	Poecilia_mexicana
ENSMODG00000020561	-	96	74.435	ENSPREG00000008456	rbm47	99	81.818	Poecilia_reticulata
ENSMODG00000020561	-	98	70.968	ENSPPYG00000014688	RBM47	100	69.898	Pongo_abelii
ENSMODG00000020561	-	81	83.250	ENSPCAG00000011879	RBM47	80	84.250	Procavia_capensis
ENSMODG00000020561	-	100	80.272	ENSPCOG00000023451	RBM47	100	84.000	Propithecus_coquereli
ENSMODG00000020561	-	100	81.650	ENSPVAG00000003812	RBM47	100	81.650	Pteropus_vampyrus
ENSMODG00000020561	-	100	70.962	ENSPNYG00000022868	rbm47	100	71.289	Pundamilia_nyererei
ENSMODG00000020561	-	96	75.916	ENSPNAG00000007940	rbm47	100	72.652	Pygocentrus_nattereri
ENSMODG00000020561	-	100	80.101	ENSRNOG00000002408	Rbm47	100	80.270	Rattus_norvegicus
ENSMODG00000020561	-	97	82.892	ENSRBIG00000039601	RBM47	100	81.980	Rhinopithecus_bieti
ENSMODG00000020561	-	97	82.892	ENSRROG00000044696	RBM47	100	81.980	Rhinopithecus_roxellana
ENSMODG00000020561	-	100	78.705	ENSSBOG00000028475	RBM47	100	83.023	Saimiri_boliviensis_boliviensis
ENSMODG00000020561	-	100	85.254	ENSSHAG00000017576	RBM47	100	85.085	Sarcophilus_harrisii
ENSMODG00000020561	-	98	70.957	ENSSFOG00015012445	rbm47	100	69.717	Scleropages_formosus
ENSMODG00000020561	-	99	70.995	ENSSFOG00015024101	RBM47	100	70.489	Scleropages_formosus
ENSMODG00000020561	-	100	71.334	ENSSMAG00000009744	rbm47	100	75.061	Scophthalmus_maximus
ENSMODG00000020561	-	100	73.693	ENSSDUG00000022684	rbm47	100	71.941	Seriola_dumerili
ENSMODG00000020561	-	100	73.986	ENSSLDG00000003109	rbm47	100	74.940	Seriola_lalandi_dorsalis
ENSMODG00000020561	-	85	83.036	ENSSARG00000001735	RBM47	84	83.259	Sorex_araneus
ENSMODG00000020561	-	100	80.880	ENSSPUG00000007515	RBM47	100	86.096	Sphenodon_punctatus
ENSMODG00000020561	-	100	74.286	ENSSPAG00000001257	rbm47	100	76.156	Stegastes_partitus
ENSMODG00000020561	-	97	83.538	ENSSSCG00000008796	RBM47	100	82.064	Sus_scrofa
ENSMODG00000020561	-	100	80.808	ENSTGUG00000008705	RBM47	100	81.313	Taeniopygia_guttata
ENSMODG00000020561	-	99	73.413	ENSTRUG00000014050	rbm47	100	72.509	Takifugu_rubripes
ENSMODG00000020561	-	100	70.364	ENSTNIG00000006127	rbm47	100	71.192	Tetraodon_nigroviridis
ENSMODG00000020561	-	74	81.921	ENSTBEG00000001607	RBM47	76	81.016	Tupaia_belangeri
ENSMODG00000020561	-	97	83.480	ENSTTRG00000002839	RBM47	100	82.173	Tursiops_truncatus
ENSMODG00000020561	-	97	82.199	ENSUAMG00000021346	RBM47	100	81.788	Ursus_americanus
ENSMODG00000020561	-	57	85.616	ENSVPAG00000000641	-	57	85.616	Vicugna_pacos
ENSMODG00000020561	-	96	83.451	ENSVVUG00000014774	RBM47	100	81.926	Vulpes_vulpes
ENSMODG00000020561	-	100	78.752	ENSXETG00000012802	rbm47	100	78.415	Xenopus_tropicalis
ENSMODG00000020561	-	86	82.044	ENSXCOG00000000780	rbm47	99	81.818	Xiphophorus_couchianus
ENSMODG00000020561	-	98	73.413	ENSXMAG00000009874	rbm47	100	78.005	Xiphophorus_maculatus