EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMODG00000020754 (Gene tree)
Gene ID: 100012426
Gene Symbol: -
Alias: -
Full Name: YTH domain containing 1
Gene Type: protein_coding
Species: Monodelphis_domestica
Status: putative
Strand: Minus strand
Length: 32509 bases
Position: chr5:154905096-154937604
Accession: 100012426
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMODP00000036081	YTH	PF04146.15	1.9e-40	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMODT00000037670	-	2106	-	ENSMODP00000036081	701 (aa)	XP_001366725	F6RD50

Gene Model

Click here to download ENSMODG00000020754's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMODG00000020754's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMODG00000020754	-	89	69.932	ENSMODG00000014337	-	95	71.212
ENSMODG00000020754	-	96	53.372	ENSMODG00000010076	-	96	52.695
ENSMODG00000020754	-	66	58.405	ENSMODG00000009173	-	87	62.500

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMODG00000020754	-	92	88.707	ENSG00000083896	YTHDC1	93	89.599	Homo_sapiens
ENSMODG00000020754	-	59	60.241	ENSAPOG00000013997	ythdc1	93	53.566	Acanthochromis_polyacanthus
ENSMODG00000020754	-	92	88.757	ENSAMEG00000005688	YTHDC1	93	88.462	Ailuropoda_melanoleuca
ENSMODG00000020754	-	59	61.927	ENSAOCG00000000239	ythdc1	94	56.725	Amphiprion_ocellaris
ENSMODG00000020754	-	51	66.391	ENSAPEG00000000618	ythdc1	90	56.634	Amphiprion_percula
ENSMODG00000020754	-	91	88.854	ENSAPLG00000009921	YTHDC1	92	87.616	Anas_platyrhynchos
ENSMODG00000020754	-	92	84.848	ENSACAG00000009697	YTHDC1	93	85.888	Anolis_carolinensis
ENSMODG00000020754	-	92	88.724	ENSANAG00000001522	YTHDC1	93	89.614	Aotus_nancymaae
ENSMODG00000020754	-	92	52.471	ENSACLG00000019371	ythdc1	94	56.681	Astatotilapia_calliptera
ENSMODG00000020754	-	92	66.418	ENSAMXG00000006978	ythdc1	92	68.018	Astyanax_mexicanus
ENSMODG00000020754	-	92	87.834	ENSBTAG00000015572	YTHDC1	93	87.982	Bos_taurus
ENSMODG00000020754	-	92	88.576	ENSCJAG00000009934	YTHDC1	93	89.614	Callithrix_jacchus
ENSMODG00000020754	-	92	88.757	ENSCAFG00000002821	YTHDC1	93	88.462	Canis_familiaris
ENSMODG00000020754	-	92	88.757	ENSCAFG00020027112	YTHDC1	93	88.462	Canis_lupus_dingo
ENSMODG00000020754	-	91	79.643	ENSCHIG00000004810	YTHDC1	95	87.234	Capra_hircus
ENSMODG00000020754	-	92	88.856	ENSTSYG00000011668	YTHDC1	93	89.896	Carlito_syrichta
ENSMODG00000020754	-	90	60.731	ENSCAPG00000008722	YTHDC1	90	60.693	Cavia_aperea
ENSMODG00000020754	-	92	81.426	ENSCPOG00000010929	YTHDC1	92	81.278	Cavia_porcellus
ENSMODG00000020754	-	92	88.839	ENSCCAG00000035754	YTHDC1	93	89.583	Cebus_capucinus
ENSMODG00000020754	-	92	87.537	ENSCATG00000036320	YTHDC1	97	87.692	Cercocebus_atys
ENSMODG00000020754	-	91	87.761	ENSCLAG00000005482	YTHDC1	92	88.060	Chinchilla_lanigera
ENSMODG00000020754	-	92	88.576	ENSCSAG00000005252	YTHDC1	93	89.614	Chlorocebus_sabaeus
ENSMODG00000020754	-	92	88.957	ENSCPBG00000021965	YTHDC1	94	88.394	Chrysemys_picta_bellii
ENSMODG00000020754	-	92	88.724	ENSCANG00000004769	YTHDC1	96	87.500	Colobus_angolensis_palliatus
ENSMODG00000020754	-	92	87.078	ENSCGRG00001000816	Ythdc1	93	87.812	Cricetulus_griseus_chok1gshd
ENSMODG00000020754	-	91	87.952	ENSCGRG00000009807	Ythdc1	92	88.705	Cricetulus_griseus_crigri
ENSMODG00000020754	-	92	53.648	ENSCSEG00000020404	ythdc1	94	56.471	Cynoglossus_semilaevis
ENSMODG00000020754	-	59	59.867	ENSCVAG00000022349	ythdc1	94	55.882	Cyprinodon_variegatus
ENSMODG00000020754	-	92	64.812	ENSDARG00000051953	ythdc1	92	64.599	Danio_rerio
ENSMODG00000020754	-	92	89.970	ENSDNOG00000004949	YTHDC1	93	89.820	Dasypus_novemcinctus
ENSMODG00000020754	-	91	88.102	ENSDORG00000013045	Ythdc1	92	88.705	Dipodomys_ordii
ENSMODG00000020754	-	80	100.000	ENSETEG00000001878	YTHDC1	75	100.000	Echinops_telfairi
ENSMODG00000020754	-	92	89.053	ENSEASG00005018383	YTHDC1	93	88.757	Equus_asinus_asinus
ENSMODG00000020754	-	92	89.053	ENSECAG00000018303	YTHDC1	99	86.406	Equus_caballus
ENSMODG00000020754	-	92	87.834	ENSEEUG00000015466	YTHDC1	93	87.240	Erinaceus_europaeus
ENSMODG00000020754	-	92	63.728	ENSELUG00000014029	ythdc1	95	65.053	Esox_lucius
ENSMODG00000020754	-	92	88.593	ENSFCAG00000026791	YTHDC1	93	89.333	Felis_catus
ENSMODG00000020754	-	73	87.196	ENSFALG00000006581	YTHDC1	87	97.704	Ficedula_albicollis
ENSMODG00000020754	-	91	88.351	ENSFDAG00000018560	YTHDC1	92	89.561	Fukomys_damarensis
ENSMODG00000020754	-	68	57.143	ENSFHEG00000001286	ythdc1	61	55.357	Fundulus_heteroclitus
ENSMODG00000020754	-	65	65.759	ENSGMOG00000018815	ythdc1	70	77.833	Gadus_morhua
ENSMODG00000020754	-	92	88.650	ENSGALG00000035906	YTHDC1	88	85.404	Gallus_gallus
ENSMODG00000020754	-	92	87.330	ENSGAGG00000007108	YTHDC1	93	86.425	Gopherus_agassizii
ENSMODG00000020754	-	92	87.537	ENSGGOG00000021958	YTHDC1	97	87.476	Gorilla_gorilla
ENSMODG00000020754	-	92	52.305	ENSHBUG00000019288	ythdc1	93	56.871	Haplochromis_burtoni
ENSMODG00000020754	-	92	87.740	ENSHGLG00000006319	-	93	89.069	Heterocephalus_glaber_female
ENSMODG00000020754	-	94	72.989	ENSHGLG00000003239	-	86	72.897	Heterocephalus_glaber_female
ENSMODG00000020754	-	92	87.816	ENSHGLG00100001556	-	93	89.153	Heterocephalus_glaber_male
ENSMODG00000020754	-	94	71.450	ENSHGLG00100008060	-	86	71.318	Heterocephalus_glaber_male
ENSMODG00000020754	-	71	72.340	ENSHCOG00000001520	ythdc1	84	72.340	Hippocampus_comes
ENSMODG00000020754	-	92	68.161	ENSIPUG00000018136	ythdc1	92	68.610	Ictalurus_punctatus
ENSMODG00000020754	-	92	87.390	ENSSTOG00000013652	YTHDC1	93	87.537	Ictidomys_tridecemlineatus
ENSMODG00000020754	-	91	85.886	ENSJJAG00000010268	Ythdc1	93	87.237	Jaculus_jaculus
ENSMODG00000020754	-	59	60.633	ENSKMAG00000006483	ythdc1	85	65.525	Kryptolebias_marmoratus
ENSMODG00000020754	-	67	62.500	ENSLBEG00000020831	ythdc1	72	77.273	Labrus_bergylta
ENSMODG00000020754	-	86	75.513	ENSLACG00000004893	YTHDC1	92	74.092	Latimeria_chalumnae
ENSMODG00000020754	-	92	72.173	ENSLOCG00000003045	ythdc1	92	70.776	Lepisosteus_oculatus
ENSMODG00000020754	-	92	88.609	ENSLAFG00000021592	YTHDC1	99	84.854	Loxodonta_africana
ENSMODG00000020754	-	92	87.683	ENSMFAG00000031927	YTHDC1	96	87.500	Macaca_fascicularis
ENSMODG00000020754	-	92	88.724	ENSMMUG00000002265	YTHDC1	93	89.763	Macaca_mulatta
ENSMODG00000020754	-	92	88.724	ENSMNEG00000033751	YTHDC1	96	87.500	Macaca_nemestrina
ENSMODG00000020754	-	92	88.576	ENSMLEG00000042147	YTHDC1	96	87.500	Mandrillus_leucophaeus
ENSMODG00000020754	-	92	52.161	ENSMZEG00005023173	ythdc1	93	56.681	Maylandia_zebra
ENSMODG00000020754	-	92	88.872	ENSMGAG00000010391	YTHDC1	92	87.805	Meleagris_gallopavo
ENSMODG00000020754	-	92	87.078	ENSMAUG00000001286	Ythdc1	93	87.959	Mesocricetus_auratus
ENSMODG00000020754	-	92	89.396	ENSMICG00000034640	YTHDC1	93	88.660	Microcebus_murinus
ENSMODG00000020754	-	92	87.316	ENSMOCG00000020201	Ythdc1	93	88.348	Microtus_ochrogaster
ENSMODG00000020754	-	52	67.467	ENSMALG00000013412	ythdc1	94	57.398	Monopterus_albus
ENSMODG00000020754	-	92	88.576	MGP_CAROLIEiJ_G0027347	Ythdc1	93	88.113	Mus_caroli
ENSMODG00000020754	-	92	88.296	ENSMUSG00000035851	Ythdc1	93	87.685	Mus_musculus
ENSMODG00000020754	-	92	88.296	MGP_PahariEiJ_G0017126	Ythdc1	93	87.685	Mus_pahari
ENSMODG00000020754	-	92	88.593	MGP_SPRETEiJ_G0028339	Ythdc1	93	87.982	Mus_spretus
ENSMODG00000020754	-	92	72.100	ENSMPUG00000001743	YTHDC1	53	98.956	Mustela_putorius_furo
ENSMODG00000020754	-	91	88.939	ENSMLUG00000016300	YTHDC1	92	89.697	Myotis_lucifugus
ENSMODG00000020754	-	59	78.995	ENSNGAG00000024000	Ythdc1	93	79.271	Nannospalax_galili
ENSMODG00000020754	-	59	60.890	ENSNBRG00000007663	ythdc1	70	66.355	Neolamprologus_brichardi
ENSMODG00000020754	-	91	87.202	ENSNLEG00000009202	YTHDC1	96	86.705	Nomascus_leucogenys
ENSMODG00000020754	-	79	82.943	ENSMEUG00000007128	YTHDC1	68	100.000	Notamacropus_eugenii
ENSMODG00000020754	-	75	98.017	ENSOPRG00000008986	YTHDC1	74	98.017	Ochotona_princeps
ENSMODG00000020754	-	92	88.939	ENSODEG00000001715	YTHDC1	93	90.284	Octodon_degus
ENSMODG00000020754	-	92	52.907	ENSONIG00000012651	ythdc1	94	56.975	Oreochromis_niloticus
ENSMODG00000020754	-	88	75.229	ENSOANG00000014398	YTHDC1	55	95.696	Ornithorhynchus_anatinus
ENSMODG00000020754	-	93	79.403	ENSOCUG00000015886	YTHDC1	56	96.212	Oryctolagus_cuniculus
ENSMODG00000020754	-	92	51.971	ENSORLG00000030544	ythdc1	94	56.909	Oryzias_latipes
ENSMODG00000020754	-	92	51.237	ENSORLG00020019316	ythdc1	94	57.122	Oryzias_latipes_hni
ENSMODG00000020754	-	92	53.304	ENSOMEG00000000551	ythdc1	94	55.670	Oryzias_melastigma
ENSMODG00000020754	-	92	88.262	ENSOGAG00000003362	YTHDC1	93	89.153	Otolemur_garnettii
ENSMODG00000020754	-	92	87.834	ENSOARG00000008633	YTHDC1	93	87.982	Ovis_aries
ENSMODG00000020754	-	92	87.665	ENSPPAG00000041315	YTHDC1	97	88.031	Pan_paniscus
ENSMODG00000020754	-	92	87.701	ENSPPRG00000011979	YTHDC1	93	87.994	Panthera_pardus
ENSMODG00000020754	-	91	87.221	ENSPTIG00000015527	YTHDC1	93	87.519	Panthera_tigris_altaica
ENSMODG00000020754	-	92	87.665	ENSPTRG00000016105	YTHDC1	97	88.031	Pan_troglodytes
ENSMODG00000020754	-	92	87.537	ENSPANG00000021590	YTHDC1	97	86.767	Papio_anubis
ENSMODG00000020754	-	92	70.765	ENSPKIG00000018497	ythdc1	93	71.364	Paramormyrops_kingsleyae
ENSMODG00000020754	-	91	89.319	ENSPSIG00000002782	YTHDC1	92	88.390	Pelodiscus_sinensis
ENSMODG00000020754	-	50	64.286	ENSPMGG00000000970	-	73	62.581	Periophthalmus_magnuspinnatus
ENSMODG00000020754	-	91	87.934	ENSPEMG00000013850	Ythdc1	92	88.688	Peromyscus_maniculatus_bairdii
ENSMODG00000020754	-	100	99.572	ENSPCIG00000006870	YTHDC1	100	99.572	Phascolarctos_cinereus
ENSMODG00000020754	-	59	60.000	ENSPFOG00000013404	ythdc1	94	56.657	Poecilia_formosa
ENSMODG00000020754	-	59	60.000	ENSPLAG00000011079	ythdc1	85	64.989	Poecilia_latipinna
ENSMODG00000020754	-	59	60.000	ENSPMEG00000009238	ythdc1	94	56.657	Poecilia_mexicana
ENSMODG00000020754	-	59	60.192	ENSPREG00000016973	ythdc1	93	52.352	Poecilia_reticulata
ENSMODG00000020754	-	79	88.581	ENSPPYG00000014726	YTHDC1	91	89.619	Pongo_abelii
ENSMODG00000020754	-	76	89.545	ENSPCAG00000009607	YTHDC1	77	89.091	Procavia_capensis
ENSMODG00000020754	-	92	84.536	ENSPCOG00000019105	YTHDC1	92	83.800	Propithecus_coquereli
ENSMODG00000020754	-	60	95.704	ENSPVAG00000015551	YTHDC1	93	86.854	Pteropus_vampyrus
ENSMODG00000020754	-	92	52.471	ENSPNYG00000011687	ythdc1	94	56.681	Pundamilia_nyererei
ENSMODG00000020754	-	92	70.387	ENSPNAG00000028365	ythdc1	93	70.746	Pygocentrus_nattereri
ENSMODG00000020754	-	60	96.956	ENSRNOG00000001996	Ythdc1	93	86.842	Rattus_norvegicus
ENSMODG00000020754	-	91	86.181	ENSRBIG00000028279	YTHDC1	96	85.962	Rhinopithecus_bieti
ENSMODG00000020754	-	92	88.724	ENSRROG00000035028	YTHDC1	96	87.500	Rhinopithecus_roxellana
ENSMODG00000020754	-	92	87.537	ENSSBOG00000022353	YTHDC1	96	87.308	Saimiri_boliviensis_boliviensis
ENSMODG00000020754	-	100	98.573	ENSSHAG00000002538	YTHDC1	100	99.684	Sarcophilus_harrisii
ENSMODG00000020754	-	92	71.450	ENSSFOG00015003298	ythdc1	93	70.544	Scleropages_formosus
ENSMODG00000020754	-	59	60.762	ENSSMAG00000009086	ythdc1	94	56.535	Scophthalmus_maximus
ENSMODG00000020754	-	72	90.249	ENSSARG00000010960	YTHDC1	91	90.057	Sorex_araneus
ENSMODG00000020754	-	92	87.557	ENSSPUG00000009357	YTHDC1	94	85.714	Sphenodon_punctatus
ENSMODG00000020754	-	59	62.844	ENSSPAG00000011449	ythdc1	94	57.205	Stegastes_partitus
ENSMODG00000020754	-	85	86.142	ENSSSCG00000035505	YTHDC1	93	87.609	Sus_scrofa
ENSMODG00000020754	-	92	88.567	ENSTGUG00000004452	-	92	87.500	Taeniopygia_guttata
ENSMODG00000020754	-	68	56.319	ENSTRUG00000010142	ythdc1	71	60.460	Takifugu_rubripes
ENSMODG00000020754	-	92	52.006	ENSTNIG00000013243	ythdc1	91	54.148	Tetraodon_nigroviridis
ENSMODG00000020754	-	92	81.900	ENSTBEG00000011546	YTHDC1	92	83.861	Tupaia_belangeri
ENSMODG00000020754	-	92	85.799	ENSTTRG00000005083	YTHDC1	93	87.130	Tursiops_truncatus
ENSMODG00000020754	-	85	88.141	ENSUAMG00000010388	YTHDC1	92	88.462	Ursus_americanus
ENSMODG00000020754	-	99	83.694	ENSUMAG00000013668	YTHDC1	98	83.694	Ursus_maritimus
ENSMODG00000020754	-	92	86.438	ENSVPAG00000009040	YTHDC1	92	86.140	Vicugna_pacos
ENSMODG00000020754	-	91	87.556	ENSVVUG00000005387	YTHDC1	92	87.680	Vulpes_vulpes
ENSMODG00000020754	-	91	76.829	ENSXETG00000017960	ythdc1	91	75.076	Xenopus_tropicalis
ENSMODG00000020754	-	92	52.199	ENSXMAG00000005196	ythdc1	94	54.801	Xiphophorus_maculatus