EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMODG00000020804 (Gene tree)
Gene ID: -
Gene Symbol: FUBP1
Alias: FBP|FUBP
Full Name: far upstream element binding protein 1
Gene Type: protein_coding
Species: Monodelphis_domestica
Status: putative
Strand: Minus strand
Length: 22558 bases
Position: chrUn:4040758-4063315
Accession: 4004
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMODP00000026022	KH_1	PF00013.29	1.2e-61	1	4
ENSMODP00000026022	KH_1	PF00013.29	1.2e-61	2	4
ENSMODP00000026022	KH_1	PF00013.29	1.2e-61	3	4
ENSMODP00000026022	KH_1	PF00013.29	1.2e-61	4	4
ENSMODP00000026022	KH_2	PF07650.17	2.8e-17	1	1
ENSMODP00000026022	DUF1897	PF09005.10	1.8e-12	1	2
ENSMODP00000026022	DUF1897	PF09005.10	1.8e-12	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMODT00000026487	FUBP1-201	1860	-	ENSMODP00000026022	617 (aa)	-	H9H7N3

Gene Model

Click here to download ENSMODG00000020804's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMODG00000020804's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMODG00000020804	FUBP1	63	34.524	ENSMODG00000011790	PCBP4	61	35.802
ENSMODG00000020804	FUBP1	98	48.903	ENSMODG00000012105	FUBP3	82	59.020
ENSMODG00000020804	FUBP1	95	53.178	ENSMODG00000001952	KHSRP	63	57.240

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMODG00000020804	FUBP1	100	90.866	ENSG00000162613	FUBP1	96	90.723	Homo_sapiens
ENSMODG00000020804	FUBP1	100	65.523	ENSAPOG00000014845	fubp1	67	69.180	Acanthochromis_polyacanthus
ENSMODG00000020804	FUBP1	100	87.709	ENSAMEG00000007372	FUBP1	96	87.709	Ailuropoda_melanoleuca
ENSMODG00000020804	FUBP1	100	64.241	ENSACIG00000020024	fubp1	66	68.610	Amphilophus_citrinellus
ENSMODG00000020804	FUBP1	100	62.500	ENSAPEG00000012232	fubp1	70	70.889	Amphiprion_percula
ENSMODG00000020804	FUBP1	100	67.453	ENSATEG00000018619	fubp1	67	72.197	Anabas_testudineus
ENSMODG00000020804	FUBP1	67	87.529	ENSAPLG00000005965	FUBP1	69	87.529	Anas_platyrhynchos
ENSMODG00000020804	FUBP1	100	80.355	ENSACAG00000006310	FUBP1	93	80.798	Anolis_carolinensis
ENSMODG00000020804	FUBP1	100	66.823	ENSACLG00000006708	fubp1	69	71.685	Astatotilapia_calliptera
ENSMODG00000020804	FUBP1	88	70.811	ENSAMXG00000005525	fubp1	64	74.931	Astyanax_mexicanus
ENSMODG00000020804	FUBP1	100	91.024	ENSCJAG00000007062	FUBP1	96	91.024	Callithrix_jacchus
ENSMODG00000020804	FUBP1	100	90.881	ENSCAFG00000020361	FUBP1	96	90.881	Canis_familiaris
ENSMODG00000020804	FUBP1	98	90.032	ENSTSYG00000000148	FUBP1	99	90.032	Carlito_syrichta
ENSMODG00000020804	FUBP1	60	87.179	ENSCAPG00000011052	-	67	87.179	Cavia_aperea
ENSMODG00000020804	FUBP1	100	90.297	ENSCPOG00000002757	FUBP1	98	86.747	Cavia_porcellus
ENSMODG00000020804	FUBP1	100	78.247	ENSCCAG00000036537	FUBP1	95	78.571	Cebus_capucinus
ENSMODG00000020804	FUBP1	100	90.723	ENSCATG00000042126	FUBP1	96	90.723	Cercocebus_atys
ENSMODG00000020804	FUBP1	100	90.881	ENSCLAG00000005621	FUBP1	100	87.500	Chinchilla_lanigera
ENSMODG00000020804	FUBP1	100	90.723	ENSCSAG00000001402	FUBP1	96	90.723	Chlorocebus_sabaeus
ENSMODG00000020804	FUBP1	100	90.723	ENSCHOG00000008177	FUBP1	94	90.723	Choloepus_hoffmanni
ENSMODG00000020804	FUBP1	100	90.596	ENSCGRG00001007103	Fubp1	96	90.454	Cricetulus_griseus_chok1gshd
ENSMODG00000020804	FUBP1	98	90.240	ENSCGRG00000003372	Fubp1	99	90.240	Cricetulus_griseus_crigri
ENSMODG00000020804	FUBP1	100	65.785	ENSCSEG00000021412	fubp1	66	71.076	Cynoglossus_semilaevis
ENSMODG00000020804	FUBP1	100	65.361	ENSCVAG00000014487	fubp1	83	53.086	Cyprinodon_variegatus
ENSMODG00000020804	FUBP1	100	65.391	ENSDARG00000029248	fubp1	68	70.897	Danio_rerio
ENSMODG00000020804	FUBP1	99	51.961	ENSDNOG00000034565	-	78	73.750	Dasypus_novemcinctus
ENSMODG00000020804	FUBP1	100	90.881	ENSDORG00000016534	Fubp1	94	90.881	Dipodomys_ordii
ENSMODG00000020804	FUBP1	76	91.304	ENSETEG00000000948	-	56	91.304	Echinops_telfairi
ENSMODG00000020804	FUBP1	66	68.333	ENSEBUG00000016143	fubp1	74	65.152	Eptatretus_burgeri
ENSMODG00000020804	FUBP1	99	97.143	ENSEEUG00000001287	FUBP1	85	97.143	Erinaceus_europaeus
ENSMODG00000020804	FUBP1	100	63.385	ENSELUG00000007990	fubp1	68	68.132	Esox_lucius
ENSMODG00000020804	FUBP1	70	87.696	ENSFALG00000005768	FUBP1	65	87.696	Ficedula_albicollis
ENSMODG00000020804	FUBP1	100	90.566	ENSFDAG00000014210	FUBP1	100	86.747	Fukomys_damarensis
ENSMODG00000020804	FUBP1	100	67.030	ENSFHEG00000005230	fubp1	67	72.870	Fundulus_heteroclitus
ENSMODG00000020804	FUBP1	100	62.031	ENSGMOG00000003370	fubp1	67	63.982	Gadus_morhua
ENSMODG00000020804	FUBP1	70	86.607	ENSGALG00000008939	FUBP1	76	86.468	Gallus_gallus
ENSMODG00000020804	FUBP1	100	65.749	ENSGAFG00000020972	fubp1	88	71.132	Gambusia_affinis
ENSMODG00000020804	FUBP1	100	65.941	ENSGACG00000016563	fubp1	67	70.667	Gasterosteus_aculeatus
ENSMODG00000020804	FUBP1	100	65.606	ENSHBUG00000009835	fubp1	82	70.337	Haplochromis_burtoni
ENSMODG00000020804	FUBP1	100	76.235	ENSHGLG00000002808	-	68	80.984	Heterocephalus_glaber_female
ENSMODG00000020804	FUBP1	100	90.297	ENSHGLG00000008415	-	100	87.500	Heterocephalus_glaber_female
ENSMODG00000020804	FUBP1	100	76.852	ENSHGLG00100001414	-	68	81.655	Heterocephalus_glaber_male
ENSMODG00000020804	FUBP1	100	90.297	ENSHGLG00100003417	-	96	90.297	Heterocephalus_glaber_male
ENSMODG00000020804	FUBP1	100	63.470	ENSHCOG00000000910	fubp1	68	68.627	Hippocampus_comes
ENSMODG00000020804	FUBP1	100	69.136	ENSIPUG00000009896	fubp1	67	71.492	Ictalurus_punctatus
ENSMODG00000020804	FUBP1	100	91.024	ENSSTOG00000014312	FUBP1	96	91.024	Ictidomys_tridecemlineatus
ENSMODG00000020804	FUBP1	100	89.812	ENSJJAG00000020069	Fubp1	100	86.747	Jaculus_jaculus
ENSMODG00000020804	FUBP1	100	65.941	ENSKMAG00000018897	fubp1	66	70.470	Kryptolebias_marmoratus
ENSMODG00000020804	FUBP1	100	62.702	ENSLBEG00000012700	fubp1	70	68.750	Labrus_bergylta
ENSMODG00000020804	FUBP1	98	66.269	ENSLOCG00000003745	fubp1	90	67.427	Lepisosteus_oculatus
ENSMODG00000020804	FUBP1	100	88.128	ENSLAFG00000003273	FUBP1	99	89.005	Loxodonta_africana
ENSMODG00000020804	FUBP1	100	90.866	ENSMFAG00000031825	FUBP1	96	90.866	Macaca_fascicularis
ENSMODG00000020804	FUBP1	100	90.866	ENSMMUG00000002899	FUBP1	96	90.723	Macaca_mulatta
ENSMODG00000020804	FUBP1	100	90.723	ENSMNEG00000045212	FUBP1	96	90.723	Macaca_nemestrina
ENSMODG00000020804	FUBP1	100	66.823	ENSMZEG00005024298	fubp1	67	73.034	Maylandia_zebra
ENSMODG00000020804	FUBP1	67	85.714	ENSMGAG00000009424	FUBP1	68	86.175	Meleagris_gallopavo
ENSMODG00000020804	FUBP1	100	90.141	ENSMAUG00000016428	Fubp1	100	85.799	Mesocricetus_auratus
ENSMODG00000020804	FUBP1	100	90.454	ENSMOCG00000014751	Fubp1	95	90.454	Microtus_ochrogaster
ENSMODG00000020804	FUBP1	88	67.019	ENSMMOG00000019463	fubp1	64	72.386	Mola_mola
ENSMODG00000020804	FUBP1	100	65.835	ENSMALG00000015173	fubp1	67	71.076	Monopterus_albus
ENSMODG00000020804	FUBP1	100	90.252	MGP_CAROLIEiJ_G0025740	Fubp1	96	94.815	Mus_caroli
ENSMODG00000020804	FUBP1	100	89.937	ENSMUSG00000028034	Fubp1	95	94.074	Mus_musculus
ENSMODG00000020804	FUBP1	100	90.566	MGP_PahariEiJ_G0027191	Fubp1	99	96.403	Mus_pahari
ENSMODG00000020804	FUBP1	100	90.094	MGP_SPRETEiJ_G0026693	Fubp1	96	94.074	Mus_spretus
ENSMODG00000020804	FUBP1	70	83.686	ENSMLUG00000014802	FUBP1	68	83.686	Myotis_lucifugus
ENSMODG00000020804	FUBP1	100	86.541	ENSNGAG00000014302	Fubp1	100	85.799	Nannospalax_galili
ENSMODG00000020804	FUBP1	100	63.150	ENSNBRG00000015099	fubp1	69	71.461	Neolamprologus_brichardi
ENSMODG00000020804	FUBP1	100	86.834	ENSNLEG00000009772	FUBP1	96	86.834	Nomascus_leucogenys
ENSMODG00000020804	FUBP1	94	100.000	ENSMEUG00000007917	-	77	100.000	Notamacropus_eugenii
ENSMODG00000020804	FUBP1	88	96.241	ENSOPRG00000001175	FUBP1	70	96.241	Ochotona_princeps
ENSMODG00000020804	FUBP1	100	90.723	ENSODEG00000002600	-	100	86.747	Octodon_degus
ENSMODG00000020804	FUBP1	100	62.282	ENSODEG00000003657	-	97	61.490	Octodon_degus
ENSMODG00000020804	FUBP1	100	65.606	ENSONIG00000018381	fubp1	67	72.809	Oreochromis_niloticus
ENSMODG00000020804	FUBP1	93	85.737	ENSOANG00000009777	FUBP1	99	85.577	Ornithorhynchus_anatinus
ENSMODG00000020804	FUBP1	100	62.618	ENSORLG00000003540	fubp1	69	71.461	Oryzias_latipes
ENSMODG00000020804	FUBP1	100	64.812	ENSORLG00020005908	fubp1	68	70.562	Oryzias_latipes_hni
ENSMODG00000020804	FUBP1	100	65.773	ENSORLG00015008779	fubp1	67	71.685	Oryzias_latipes_hsok
ENSMODG00000020804	FUBP1	100	63.253	ENSOMEG00000021943	fubp1	67	68.989	Oryzias_melastigma
ENSMODG00000020804	FUBP1	100	87.179	ENSOGAG00000014233	FUBP1	96	87.179	Otolemur_garnettii
ENSMODG00000020804	FUBP1	100	88.397	ENSOARG00000013259	FUBP1	96	88.244	Ovis_aries
ENSMODG00000020804	FUBP1	100	90.881	ENSPPRG00000000413	FUBP1	96	90.881	Panthera_pardus
ENSMODG00000020804	FUBP1	100	90.881	ENSPTIG00000019450	FUBP1	96	90.881	Panthera_tigris_altaica
ENSMODG00000020804	FUBP1	68	86.364	ENSPSIG00000012965	FUBP1	69	86.364	Pelodiscus_sinensis
ENSMODG00000020804	FUBP1	99	66.562	ENSPMGG00000009060	fubp1	68	70.796	Periophthalmus_magnuspinnatus
ENSMODG00000020804	FUBP1	100	90.297	ENSPEMG00000021802	Fubp1	100	86.145	Peromyscus_maniculatus_bairdii
ENSMODG00000020804	FUBP1	64	63.063	ENSPMAG00000001644	-	90	63.063	Petromyzon_marinus
ENSMODG00000020804	FUBP1	100	63.893	ENSPLAG00000021170	fubp1	69	72.870	Poecilia_latipinna
ENSMODG00000020804	FUBP1	100	67.661	ENSPMEG00000004747	fubp1	70	72.870	Poecilia_mexicana
ENSMODG00000020804	FUBP1	100	67.185	ENSPREG00000017911	fubp1	67	72.870	Poecilia_reticulata
ENSMODG00000020804	FUBP1	76	88.352	ENSPPYG00000001219	-	65	88.143	Pongo_abelii
ENSMODG00000020804	FUBP1	100	90.723	ENSPCAG00000012617	FUBP1	94	90.723	Procavia_capensis
ENSMODG00000020804	FUBP1	100	90.881	ENSPCOG00000024974	FUBP1	96	90.881	Propithecus_coquereli
ENSMODG00000020804	FUBP1	100	86.321	ENSPVAG00000014637	FUBP1	94	86.321	Pteropus_vampyrus
ENSMODG00000020804	FUBP1	100	66.823	ENSPNYG00000004552	fubp1	70	72.135	Pundamilia_nyererei
ENSMODG00000020804	FUBP1	100	67.267	ENSPNAG00000016207	fubp1	84	69.717	Pygocentrus_nattereri
ENSMODG00000020804	FUBP1	100	90.282	ENSRNOG00000043370	Fubp1	96	90.282	Rattus_norvegicus
ENSMODG00000020804	FUBP1	100	90.723	ENSRBIG00000042950	FUBP1	96	90.723	Rhinopithecus_bieti
ENSMODG00000020804	FUBP1	100	90.723	ENSRROG00000043534	FUBP1	96	90.723	Rhinopithecus_roxellana
ENSMODG00000020804	FUBP1	100	90.881	ENSSBOG00000027299	FUBP1	96	90.881	Saimiri_boliviensis_boliviensis
ENSMODG00000020804	FUBP1	98	91.054	ENSSHAG00000005367	FUBP1	99	91.228	Sarcophilus_harrisii
ENSMODG00000020804	FUBP1	99	69.462	ENSSFOG00015010213	fubp1	67	72.545	Scleropages_formosus
ENSMODG00000020804	FUBP1	100	65.084	ENSSDUG00000007383	fubp1	66	70.460	Seriola_dumerili
ENSMODG00000020804	FUBP1	100	65.084	ENSSLDG00000022863	fubp1	69	69.933	Seriola_lalandi_dorsalis
ENSMODG00000020804	FUBP1	84	98.182	ENSSARG00000011730	FUBP1	52	98.182	Sorex_araneus
ENSMODG00000020804	FUBP1	100	82.137	ENSSPUG00000008389	FUBP1	96	79.438	Sphenodon_punctatus
ENSMODG00000020804	FUBP1	100	66.928	ENSSPAG00000010161	fubp1	66	71.076	Stegastes_partitus
ENSMODG00000020804	FUBP1	67	87.529	ENSTGUG00000006841	FUBP1	69	87.529	Taeniopygia_guttata
ENSMODG00000020804	FUBP1	54	84.459	ENSTNIG00000019815	-	88	84.459	Tetraodon_nigroviridis
ENSMODG00000020804	FUBP1	85	97.436	ENSTBEG00000017333	FUBP1	65	97.436	Tupaia_belangeri
ENSMODG00000020804	FUBP1	100	91.038	ENSTTRG00000000096	FUBP1	94	91.038	Tursiops_truncatus
ENSMODG00000020804	FUBP1	100	91.038	ENSVPAG00000004709	FUBP1	95	91.038	Vicugna_pacos
ENSMODG00000020804	FUBP1	100	64.455	ENSXCOG00000019354	fubp1	70	71.493	Xiphophorus_couchianus
ENSMODG00000020804	FUBP1	97	67.419	ENSXMAG00000007168	fubp1	70	72.646	Xiphophorus_maculatus