EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMODG00000021033 (Gene tree)
Gene ID: 100014689
Gene Symbol: RRP1B
Alias: KIAA0179|Nnp1|PPP1R136|RRP1
Full Name: ribosomal RNA processing 1B
Gene Type: protein_coding
Species: Monodelphis_domestica
Status: putative
Strand: Plus strand
Length: 38914 bases
Position: chr4:9882867-9921780
Accession: 100014689
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMODP00000026302	Nop52	PF05997.12	4.3e-71	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMODT00000026770	RRP1B-201	5838	XM_007493206	ENSMODP00000026302	760 (aa)	XP_007493268	F6W0J2

Gene Model

Click here to download ENSMODG00000021033's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMODG00000021033's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMODG00000021033	RRP1B	100	65.314	ENSG00000160208	RRP1B	100	65.314	Homo_sapiens
ENSMODG00000021033	RRP1B	72	73.402	ENSAMEG00000011401	RRP1B	76	73.402	Ailuropoda_melanoleuca
ENSMODG00000021033	RRP1B	58	51.948	ENSAOCG00000017894	-	95	50.685	Amphiprion_ocellaris
ENSMODG00000021033	RRP1B	64	49.725	ENSAPEG00000024150	-	51	48.219	Amphiprion_percula
ENSMODG00000021033	RRP1B	94	50.811	ENSAPLG00000004310	RRP1B	100	51.355	Anas_platyrhynchos
ENSMODG00000021033	RRP1B	99	49.740	ENSACAG00000017851	RRP1B	95	49.481	Anolis_carolinensis
ENSMODG00000021033	RRP1B	100	63.529	ENSANAG00000034889	RRP1B	100	63.529	Aotus_nancymaae
ENSMODG00000021033	RRP1B	100	59.508	ENSBTAG00000017418	RRP1B	100	60.417	Bos_taurus
ENSMODG00000021033	RRP1B	50	52.742	ENSCJAG00000043205	RRP1	70	55.685	Callithrix_jacchus
ENSMODG00000021033	RRP1B	100	62.484	ENSCJAG00000017077	RRP1B	100	62.484	Callithrix_jacchus
ENSMODG00000021033	RRP1B	94	61.304	ENSCAFG00000010621	RRP1B	99	62.465	Canis_familiaris
ENSMODG00000021033	RRP1B	51	46.313	ENSCAFG00000010646	RRP1	76	54.335	Canis_familiaris
ENSMODG00000021033	RRP1B	100	62.385	ENSCAFG00020018901	RRP1B	100	63.351	Canis_lupus_dingo
ENSMODG00000021033	RRP1B	56	47.344	ENSCHIG00000020948	RRP1	77	53.757	Capra_hircus
ENSMODG00000021033	RRP1B	100	62.060	ENSCHIG00000021519	RRP1B	100	61.749	Capra_hircus
ENSMODG00000021033	RRP1B	100	54.297	ENSCPOG00000002396	RRP1B	100	53.585	Cavia_porcellus
ENSMODG00000021033	RRP1B	52	51.861	ENSCCAG00000029828	RRP1	74	55.263	Cebus_capucinus
ENSMODG00000021033	RRP1B	100	62.696	ENSCCAG00000029384	RRP1B	100	62.696	Cebus_capucinus
ENSMODG00000021033	RRP1B	100	64.444	ENSCATG00000017423	RRP1B	100	64.444	Cercocebus_atys
ENSMODG00000021033	RRP1B	51	49.620	ENSCLAG00000011639	RRP1	76	52.011	Chinchilla_lanigera
ENSMODG00000021033	RRP1B	100	56.266	ENSCLAG00000005622	RRP1B	100	55.639	Chinchilla_lanigera
ENSMODG00000021033	RRP1B	100	64.398	ENSCSAG00000007961	RRP1B	100	64.398	Chlorocebus_sabaeus
ENSMODG00000021033	RRP1B	51	61.538	ENSCHOG00000002426	-	55	66.369	Choloepus_hoffmanni
ENSMODG00000021033	RRP1B	99	57.752	ENSCPBG00000010310	RRP1B	99	56.480	Chrysemys_picta_bellii
ENSMODG00000021033	RRP1B	57	34.086	ENSCING00000003304	-	56	43.612	Ciona_intestinalis
ENSMODG00000021033	RRP1B	100	64.837	ENSCANG00000040952	RRP1B	100	64.837	Colobus_angolensis_palliatus
ENSMODG00000021033	RRP1B	100	57.199	ENSCGRG00001023882	-	100	55.963	Cricetulus_griseus_chok1gshd
ENSMODG00000021033	RRP1B	100	57.461	ENSCGRG00001010889	-	100	57.461	Cricetulus_griseus_chok1gshd
ENSMODG00000021033	RRP1B	94	56.588	ENSCGRG00000001553	Rrp1b	97	56.510	Cricetulus_griseus_crigri
ENSMODG00000021033	RRP1B	58	53.846	ENSCSEG00000020711	-	99	51.130	Cynoglossus_semilaevis
ENSMODG00000021033	RRP1B	51	44.924	ENSCVAG00000017568	-	90	46.045	Cyprinodon_variegatus
ENSMODG00000021033	RRP1B	60	47.977	ENSDARG00000103337	rrp1	59	46.857	Danio_rerio
ENSMODG00000021033	RRP1B	100	61.118	ENSDNOG00000032774	RRP1B	100	60.784	Dasypus_novemcinctus
ENSMODG00000021033	RRP1B	93	55.062	ENSDORG00000005496	Rrp1b	100	54.092	Dipodomys_ordii
ENSMODG00000021033	RRP1B	100	55.497	ENSETEG00000019489	RRP1B	100	55.512	Echinops_telfairi
ENSMODG00000021033	RRP1B	100	64.851	ENSEASG00005001687	RRP1B	100	64.721	Equus_asinus_asinus
ENSMODG00000021033	RRP1B	54	48.193	ENSEASG00005001673	RRP1	77	54.810	Equus_asinus_asinus
ENSMODG00000021033	RRP1B	100	64.752	ENSECAG00000018018	RRP1B	100	64.721	Equus_caballus
ENSMODG00000021033	RRP1B	54	48.434	ENSECAG00000015703	RRP1	77	55.102	Equus_caballus
ENSMODG00000021033	RRP1B	64	51.562	ENSELUG00000015885	-	89	47.561	Esox_lucius
ENSMODG00000021033	RRP1B	100	61.518	ENSFCAG00000010272	RRP1B	100	61.438	Felis_catus
ENSMODG00000021033	RRP1B	55	48.086	ENSFCAG00000008434	RRP1	92	46.172	Felis_catus
ENSMODG00000021033	RRP1B	92	49.374	ENSFALG00000002024	RRP1B	100	48.143	Ficedula_albicollis
ENSMODG00000021033	RRP1B	96	55.450	ENSFDAG00000010899	RRP1B	96	54.843	Fukomys_damarensis
ENSMODG00000021033	RRP1B	51	50.127	ENSFDAG00000013728	RRP1	76	52.312	Fukomys_damarensis
ENSMODG00000021033	RRP1B	75	51.579	ENSFHEG00000016314	-	53	46.273	Fundulus_heteroclitus
ENSMODG00000021033	RRP1B	62	46.260	ENSGMOG00000001953	-	66	46.459	Gadus_morhua
ENSMODG00000021033	RRP1B	100	51.403	ENSGALG00000035696	RRP1B	100	51.720	Gallus_gallus
ENSMODG00000021033	RRP1B	68	47.682	ENSGACG00000001438	rrp1	71	46.512	Gasterosteus_aculeatus
ENSMODG00000021033	RRP1B	100	56.923	ENSGAGG00000000375	RRP1B	100	56.427	Gopherus_agassizii
ENSMODG00000021033	RRP1B	100	65.183	ENSGGOG00000012069	RRP1B	100	65.183	Gorilla_gorilla
ENSMODG00000021033	RRP1B	99	56.545	ENSHGLG00000004968	RRP1B	100	57.199	Heterocephalus_glaber_female
ENSMODG00000021033	RRP1B	75	65.758	ENSHGLG00100002232	RRP1B	97	51.984	Heterocephalus_glaber_male
ENSMODG00000021033	RRP1B	66	44.961	ENSHCOG00000018388	-	62	44.531	Hippocampus_comes
ENSMODG00000021033	RRP1B	63	46.757	ENSIPUG00000000673	-	71	46.612	Ictalurus_punctatus
ENSMODG00000021033	RRP1B	99	59.735	ENSSTOG00000011790	RRP1B	96	60.288	Ictidomys_tridecemlineatus
ENSMODG00000021033	RRP1B	100	53.282	ENSJJAG00000021279	Rrp1b	100	52.387	Jaculus_jaculus
ENSMODG00000021033	RRP1B	63	47.727	ENSKMAG00000005539	rrp1	74	47.814	Kryptolebias_marmoratus
ENSMODG00000021033	RRP1B	99	44.689	ENSLACG00000017332	-	99	44.761	Latimeria_chalumnae
ENSMODG00000021033	RRP1B	89	59.913	ENSLAFG00000000766	RRP1B	100	61.569	Loxodonta_africana
ENSMODG00000021033	RRP1B	100	64.444	ENSMFAG00000039152	RRP1B	100	64.444	Macaca_fascicularis
ENSMODG00000021033	RRP1B	100	62.614	ENSMMUG00000000104	RRP1B	100	62.614	Macaca_mulatta
ENSMODG00000021033	RRP1B	100	64.575	ENSMNEG00000034269	RRP1B	100	64.575	Macaca_nemestrina
ENSMODG00000021033	RRP1B	95	63.122	ENSMLEG00000040044	RRP1B	99	63.122	Mandrillus_leucophaeus
ENSMODG00000021033	RRP1B	52	62.278	ENSMGAG00000014591	RRP1B	100	51.018	Meleagris_gallopavo
ENSMODG00000021033	RRP1B	100	54.915	ENSMAUG00000021508	Rrp1b	100	53.806	Mesocricetus_auratus
ENSMODG00000021033	RRP1B	100	65.354	ENSMICG00000004686	RRP1B	100	65.354	Microcebus_murinus
ENSMODG00000021033	RRP1B	100	53.141	ENSMOCG00000001117	Rrp1b	100	53.010	Microtus_ochrogaster
ENSMODG00000021033	RRP1B	100	52.887	MGP_CAROLIEiJ_G0021376	Rrp1b	100	52.100	Mus_caroli
ENSMODG00000021033	RRP1B	50	56.746	ENSMUSG00000061032	Rrp1	72	58.824	Mus_musculus
ENSMODG00000021033	RRP1B	100	52.680	ENSMUSG00000058392	Rrp1b	100	51.895	Mus_musculus
ENSMODG00000021033	RRP1B	100	53.796	MGP_PahariEiJ_G0023695	Rrp1b	100	53.665	Mus_pahari
ENSMODG00000021033	RRP1B	100	53.464	MGP_SPRETEiJ_G0022290	Rrp1b	100	52.549	Mus_spretus
ENSMODG00000021033	RRP1B	84	54.899	ENSMPUG00000009810	RRP1B	99	55.901	Mustela_putorius_furo
ENSMODG00000021033	RRP1B	99	63.660	ENSMLUG00000007738	RRP1B	99	64.083	Myotis_lucifugus
ENSMODG00000021033	RRP1B	100	56.078	ENSNGAG00000021073	Rrp1b	100	55.556	Nannospalax_galili
ENSMODG00000021033	RRP1B	100	63.351	ENSNLEG00000001490	RRP1B	100	63.351	Nomascus_leucogenys
ENSMODG00000021033	RRP1B	75	99.160	ENSMEUG00000003226	-	89	99.160	Notamacropus_eugenii
ENSMODG00000021033	RRP1B	100	52.591	ENSODEG00000013177	RRP1B	100	52.270	Octodon_degus
ENSMODG00000021033	RRP1B	99	57.274	ENSOANG00000006470	RRP1B	99	57.500	Ornithorhynchus_anatinus
ENSMODG00000021033	RRP1B	94	49.028	ENSOCUG00000025931	RRP1B	85	61.953	Oryctolagus_cuniculus
ENSMODG00000021033	RRP1B	69	48.062	ENSORLG00020007199	-	62	50.138	Oryzias_latipes_hni
ENSMODG00000021033	RRP1B	69	47.558	ENSORLG00015004425	-	62	50.964	Oryzias_latipes_hsok
ENSMODG00000021033	RRP1B	71	47.013	ENSOMEG00000016910	-	60	48.189	Oryzias_melastigma
ENSMODG00000021033	RRP1B	82	71.901	ENSOGAG00000009872	RRP1B	91	71.901	Otolemur_garnettii
ENSMODG00000021033	RRP1B	94	59.392	ENSOARG00000011314	RRP1B	100	59.116	Ovis_aries
ENSMODG00000021033	RRP1B	95	63.762	ENSPPAG00000035319	RRP1B	99	63.850	Pan_paniscus
ENSMODG00000021033	RRP1B	100	60.733	ENSPPRG00000010356	RRP1B	100	60.444	Panthera_pardus
ENSMODG00000021033	RRP1B	75	66.667	ENSPTIG00000016894	RRP1B	97	66.076	Panthera_tigris_altaica
ENSMODG00000021033	RRP1B	51	42.857	ENSPTIG00000019473	RRP1	69	47.573	Panthera_tigris_altaica
ENSMODG00000021033	RRP1B	100	65.445	ENSPTRG00000013958	RRP1B	100	65.445	Pan_troglodytes
ENSMODG00000021033	RRP1B	100	64.837	ENSPANG00000011090	RRP1B	100	64.837	Papio_anubis
ENSMODG00000021033	RRP1B	52	51.000	ENSPANG00000015097	RRP1	73	54.942	Papio_anubis
ENSMODG00000021033	RRP1B	99	56.995	ENSPSIG00000008152	RRP1B	96	56.433	Pelodiscus_sinensis
ENSMODG00000021033	RRP1B	100	55.366	ENSPEMG00000022490	Rrp1b	100	54.391	Peromyscus_maniculatus_bairdii
ENSMODG00000021033	RRP1B	79	44.290	ENSPCIG00000015523	-	76	60.694	Phascolarctos_cinereus
ENSMODG00000021033	RRP1B	100	87.927	ENSPCIG00000015513	RRP1B	100	87.927	Phascolarctos_cinereus
ENSMODG00000021033	RRP1B	62	42.380	ENSPFOG00000007424	-	50	46.482	Poecilia_formosa
ENSMODG00000021033	RRP1B	51	47.059	ENSPLAG00000016684	-	55	47.059	Poecilia_latipinna
ENSMODG00000021033	RRP1B	70	47.059	ENSPMEG00000007042	-	65	47.059	Poecilia_mexicana
ENSMODG00000021033	RRP1B	66	47.044	ENSPREG00000015673	-	53	54.945	Poecilia_reticulata
ENSMODG00000021033	RRP1B	100	65.013	ENSPPYG00000011470	RRP1B	100	65.013	Pongo_abelii
ENSMODG00000021033	RRP1B	85	82.105	ENSPCAG00000013723	RRP1B	91	82.105	Procavia_capensis
ENSMODG00000021033	RRP1B	100	65.354	ENSPCOG00000017927	RRP1B	100	65.486	Propithecus_coquereli
ENSMODG00000021033	RRP1B	99	59.477	ENSPVAG00000001436	RRP1B	99	59.555	Pteropus_vampyrus
ENSMODG00000021033	RRP1B	65	58.750	ENSPNAG00000007718	-	58	45.658	Pygocentrus_nattereri
ENSMODG00000021033	RRP1B	100	54.974	ENSRNOG00000001194	Rrp1b	100	54.188	Rattus_norvegicus
ENSMODG00000021033	RRP1B	100	60.733	ENSRBIG00000041689	RRP1B	100	60.733	Rhinopithecus_bieti
ENSMODG00000021033	RRP1B	100	64.660	ENSRROG00000031499	RRP1B	100	64.660	Rhinopithecus_roxellana
ENSMODG00000021033	RRP1B	95	59.733	ENSSBOG00000034727	RRP1B	99	59.893	Saimiri_boliviensis_boliviensis
ENSMODG00000021033	RRP1B	51	51.026	ENSSBOG00000034689	RRP1	74	53.043	Saimiri_boliviensis_boliviensis
ENSMODG00000021033	RRP1B	100	88.583	ENSSHAG00000017789	RRP1B	100	88.583	Sarcophilus_harrisii
ENSMODG00000021033	RRP1B	50	43.781	ENSSFOG00015003932	-	52	47.801	Scleropages_formosus
ENSMODG00000021033	RRP1B	67	48.118	ENSSMAG00000016847	-	85	47.606	Scophthalmus_maximus
ENSMODG00000021033	RRP1B	64	49.072	ENSSDUG00000000551	-	53	49.176	Seriola_dumerili
ENSMODG00000021033	RRP1B	64	48.387	ENSSLDG00000002538	-	53	49.311	Seriola_lalandi_dorsalis
ENSMODG00000021033	RRP1B	70	61.754	ENSSARG00000003108	-	76	60.627	Sorex_araneus
ENSMODG00000021033	RRP1B	100	51.500	ENSSPUG00000002834	RRP1B	100	51.317	Sphenodon_punctatus
ENSMODG00000021033	RRP1B	64	50.000	ENSSPAG00000005370	-	51	46.684	Stegastes_partitus
ENSMODG00000021033	RRP1B	100	56.806	ENSSSCG00000021698	RRP1B	100	57.461	Sus_scrofa
ENSMODG00000021033	RRP1B	67	47.191	ENSTNIG00000005053	rrp1	69	47.191	Tetraodon_nigroviridis
ENSMODG00000021033	RRP1B	76	75.074	ENSTBEG00000000422	RRP1B	99	73.214	Tupaia_belangeri
ENSMODG00000021033	RRP1B	100	59.269	ENSTTRG00000000723	RRP1B	100	59.791	Tursiops_truncatus
ENSMODG00000021033	RRP1B	100	60.288	ENSUAMG00000026765	RRP1B	100	61.075	Ursus_americanus
ENSMODG00000021033	RRP1B	62	74.436	ENSUMAG00000025510	RRP1B	91	74.194	Ursus_maritimus
ENSMODG00000021033	RRP1B	94	62.241	ENSVVUG00000024509	RRP1B	99	62.379	Vulpes_vulpes
ENSMODG00000021033	RRP1B	65	45.631	ENSXETG00000013683	rrp1b	69	46.724	Xenopus_tropicalis
ENSMODG00000021033	RRP1B	80	47.884	ENSXMAG00000023123	-	54	52.083	Xiphophorus_maculatus