EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMODG00000021040 (Gene tree)
Gene ID: 100025053
Gene Symbol: SCAF4
Alias: DKFZp434E098|KIAA1172|SFRS15|SRA4
Full Name: SR-related CTD associated factor 4
Gene Type: protein_coding
Species: Monodelphis_domestica
Status: putative
Strand: Plus strand
Length: 111540 bases
Position: chr4:10626850-10738389
Accession: 100025053
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMODP00000026309	RRM_1	PF00076.22	2.1e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMODT00000026777	SCAF4-201	3287	-	ENSMODP00000026309	1081 (aa)	XP_007493279	F6W0D3

Gene Model

Click here to download ENSMODG00000021040's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMODG00000021040's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMODG00000021040	SCAF4	100	83.739	ENSG00000156304	SCAF4	100	84.609	Homo_sapiens
ENSMODG00000021040	SCAF4	73	85.645	ENSAMEG00000014987	SCAF4	97	86.232	Ailuropoda_melanoleuca
ENSMODG00000021040	SCAF4	99	77.748	ENSAPLG00000002509	SCAF4	100	76.937	Anas_platyrhynchos
ENSMODG00000021040	SCAF4	95	69.773	ENSACAG00000002569	SCAF4	90	69.773	Anolis_carolinensis
ENSMODG00000021040	SCAF4	100	83.579	ENSANAG00000037494	SCAF4	100	84.535	Aotus_nancymaae
ENSMODG00000021040	SCAF4	55	56.870	ENSACLG00000024833	scaf4b	55	73.418	Astatotilapia_calliptera
ENSMODG00000021040	SCAF4	93	52.941	ENSAMXG00000008585	scaf4a	60	65.669	Astyanax_mexicanus
ENSMODG00000021040	SCAF4	100	83.944	ENSBTAG00000018855	SCAF4	100	84.555	Bos_taurus
ENSMODG00000021040	SCAF4	100	83.507	ENSCJAG00000008993	SCAF4	99	87.635	Callithrix_jacchus
ENSMODG00000021040	SCAF4	99	85.208	ENSCAFG00000008863	SCAF4	99	85.740	Canis_familiaris
ENSMODG00000021040	SCAF4	99	83.363	ENSCAFG00020026019	SCAF4	100	84.080	Canis_lupus_dingo
ENSMODG00000021040	SCAF4	100	83.784	ENSCHIG00000008385	SCAF4	100	84.394	Capra_hircus
ENSMODG00000021040	SCAF4	99	80.692	ENSTSYG00000011344	SCAF4	99	78.818	Carlito_syrichta
ENSMODG00000021040	SCAF4	100	81.414	ENSCPOG00000012443	SCAF4	100	81.588	Cavia_porcellus
ENSMODG00000021040	SCAF4	100	83.972	ENSCCAG00000033727	SCAF4	100	84.930	Cebus_capucinus
ENSMODG00000021040	SCAF4	99	84.691	ENSCATG00000030379	SCAF4	99	85.561	Cercocebus_atys
ENSMODG00000021040	SCAF4	99	81.337	ENSCLAG00000006298	SCAF4	100	81.858	Chinchilla_lanigera
ENSMODG00000021040	SCAF4	100	83.449	ENSCSAG00000009438	SCAF4	100	84.402	Chlorocebus_sabaeus
ENSMODG00000021040	SCAF4	100	83.899	ENSCANG00000029847	SCAF4	100	84.943	Colobus_angolensis_palliatus
ENSMODG00000021040	SCAF4	99	75.248	ENSCGRG00001020821	Scaf4	99	76.540	Cricetulus_griseus_chok1gshd
ENSMODG00000021040	SCAF4	99	74.917	ENSCGRG00000014360	Scaf4	99	77.473	Cricetulus_griseus_crigri
ENSMODG00000021040	SCAF4	100	80.927	ENSDNOG00000019014	SCAF4	94	81.715	Dasypus_novemcinctus
ENSMODG00000021040	SCAF4	96	73.049	ENSETEG00000000583	SCAF4	99	73.684	Echinops_telfairi
ENSMODG00000021040	SCAF4	100	84.528	ENSEASG00005007756	SCAF4	100	85.664	Equus_asinus_asinus
ENSMODG00000021040	SCAF4	100	84.454	ENSECAG00000014248	SCAF4	100	85.415	Equus_caballus
ENSMODG00000021040	SCAF4	100	84.729	ENSFCAG00000002228	SCAF4	100	85.340	Felis_catus
ENSMODG00000021040	SCAF4	99	79.741	ENSFDAG00000017780	SCAF4	100	80.345	Fukomys_damarensis
ENSMODG00000021040	SCAF4	51	59.124	ENSFHEG00000007634	scaf4b	54	70.886	Fundulus_heteroclitus
ENSMODG00000021040	SCAF4	100	79.425	ENSGALG00000033965	SCAF4	100	79.066	Gallus_gallus
ENSMODG00000021040	SCAF4	71	52.835	ENSGACG00000020580	scaf4a	58	59.722	Gasterosteus_aculeatus
ENSMODG00000021040	SCAF4	92	82.432	ENSGGOG00000015557	SCAF4	99	87.009	Gorilla_gorilla
ENSMODG00000021040	SCAF4	100	82.439	ENSHGLG00000010582	SCAF4	100	82.958	Heterocephalus_glaber_female
ENSMODG00000021040	SCAF4	99	82.224	ENSHGLG00100009441	SCAF4	100	82.750	Heterocephalus_glaber_male
ENSMODG00000021040	SCAF4	99	77.885	ENSSTOG00000004450	SCAF4	100	78.326	Ictidomys_tridecemlineatus
ENSMODG00000021040	SCAF4	99	80.725	ENSJJAG00000019447	Scaf4	99	81.609	Jaculus_jaculus
ENSMODG00000021040	SCAF4	96	62.726	ENSLACG00000013913	SCAF4	99	63.291	Latimeria_chalumnae
ENSMODG00000021040	SCAF4	99	59.679	ENSLOCG00000009162	scaf4a	59	70.833	Lepisosteus_oculatus
ENSMODG00000021040	SCAF4	100	86.818	ENSLAFG00000010710	SCAF4	100	87.273	Loxodonta_africana
ENSMODG00000021040	SCAF4	99	84.567	ENSMFAG00000037668	SCAF4	100	84.283	Macaca_fascicularis
ENSMODG00000021040	SCAF4	100	83.161	ENSMMUG00000001712	SCAF4	100	84.197	Macaca_mulatta
ENSMODG00000021040	SCAF4	99	84.492	ENSMNEG00000032966	SCAF4	100	84.211	Macaca_nemestrina
ENSMODG00000021040	SCAF4	99	83.246	ENSMLEG00000039674	SCAF4	100	84.293	Mandrillus_leucophaeus
ENSMODG00000021040	SCAF4	99	78.986	ENSMGAG00000014515	SCAF4	100	78.623	Meleagris_gallopavo
ENSMODG00000021040	SCAF4	99	81.327	ENSMAUG00000013307	Scaf4	100	81.488	Mesocricetus_auratus
ENSMODG00000021040	SCAF4	99	85.331	ENSMICG00000005256	SCAF4	100	84.978	Microcebus_murinus
ENSMODG00000021040	SCAF4	100	78.212	ENSMOCG00000012087	Scaf4	99	79.043	Microtus_ochrogaster
ENSMODG00000021040	SCAF4	99	75.572	MGP_CAROLIEiJ_G0020944	Scaf4	98	77.936	Mus_caroli
ENSMODG00000021040	SCAF4	99	75.738	ENSMUSG00000022983	Scaf4	99	77.374	Mus_musculus
ENSMODG00000021040	SCAF4	99	74.492	MGP_PahariEiJ_G0016649	Scaf4	99	78.068	Mus_pahari
ENSMODG00000021040	SCAF4	99	76.089	MGP_SPRETEiJ_G0021850	Scaf4	100	78.462	Mus_spretus
ENSMODG00000021040	SCAF4	100	83.016	ENSMPUG00000001078	SCAF4	100	83.882	Mustela_putorius_furo
ENSMODG00000021040	SCAF4	97	71.354	ENSMLUG00000011472	SCAF4	99	69.040	Myotis_lucifugus
ENSMODG00000021040	SCAF4	99	81.563	ENSNGAG00000005214	Scaf4	99	82.399	Nannospalax_galili
ENSMODG00000021040	SCAF4	100	83.826	ENSNLEG00000003569	SCAF4	100	84.696	Nomascus_leucogenys
ENSMODG00000021040	SCAF4	84	90.683	ENSOPRG00000007016	SCAF4	75	91.503	Ochotona_princeps
ENSMODG00000021040	SCAF4	73	82.933	ENSODEG00000002718	SCAF4	100	80.427	Octodon_degus
ENSMODG00000021040	SCAF4	74	56.848	ENSONIG00000004687	scaf4a	56	63.889	Oreochromis_niloticus
ENSMODG00000021040	SCAF4	100	80.035	ENSOCUG00000008336	SCAF4	63	85.331	Oryctolagus_cuniculus
ENSMODG00000021040	SCAF4	55	57.255	ENSORLG00000003420	scaf4b	59	70.482	Oryzias_latipes
ENSMODG00000021040	SCAF4	99	84.868	ENSOGAG00000014653	SCAF4	94	85.624	Otolemur_garnettii
ENSMODG00000021040	SCAF4	99	83.377	ENSOARG00000013894	SCAF4	99	83.843	Ovis_aries
ENSMODG00000021040	SCAF4	100	83.739	ENSPPAG00000028535	SCAF4	100	84.609	Pan_paniscus
ENSMODG00000021040	SCAF4	99	84.744	ENSPPRG00000000635	SCAF4	100	85.362	Panthera_pardus
ENSMODG00000021040	SCAF4	99	83.512	ENSPTIG00000021578	SCAF4	99	80.986	Panthera_tigris_altaica
ENSMODG00000021040	SCAF4	100	83.739	ENSPTRG00000013848	SCAF4	100	84.609	Pan_troglodytes
ENSMODG00000021040	SCAF4	100	83.247	ENSPANG00000017332	SCAF4	100	84.283	Papio_anubis
ENSMODG00000021040	SCAF4	65	64.785	ENSPKIG00000022408	scaf4a	90	67.485	Paramormyrops_kingsleyae
ENSMODG00000021040	SCAF4	99	80.369	ENSPSIG00000014242	SCAF4	97	79.374	Pelodiscus_sinensis
ENSMODG00000021040	SCAF4	60	60.769	ENSPMGG00000016741	scaf4a	78	61.232	Periophthalmus_magnuspinnatus
ENSMODG00000021040	SCAF4	99	95.145	ENSPCIG00000028183	SCAF4	91	95.145	Phascolarctos_cinereus
ENSMODG00000021040	SCAF4	52	57.246	ENSPLAG00000004403	-	60	60.000	Poecilia_latipinna
ENSMODG00000021040	SCAF4	100	83.666	ENSPPYG00000011355	SCAF4	100	84.535	Pongo_abelii
ENSMODG00000021040	SCAF4	96	89.286	ENSPCAG00000009998	SCAF4	100	75.862	Procavia_capensis
ENSMODG00000021040	SCAF4	99	85.076	ENSPCOG00000018710	SCAF4	99	85.880	Propithecus_coquereli
ENSMODG00000021040	SCAF4	100	85.351	ENSPVAG00000005220	SCAF4	100	85.526	Pteropus_vampyrus
ENSMODG00000021040	SCAF4	55	56.870	ENSPNYG00000010526	scaf4b	55	73.418	Pundamilia_nyererei
ENSMODG00000021040	SCAF4	78	60.397	ENSPNAG00000016892	scaf4a	60	67.026	Pygocentrus_nattereri
ENSMODG00000021040	SCAF4	82	84.420	ENSRNOG00000002104	Scaf4	80	89.124	Rattus_norvegicus
ENSMODG00000021040	SCAF4	99	83.393	ENSRBIG00000040007	SCAF4	61	85.152	Rhinopithecus_bieti
ENSMODG00000021040	SCAF4	100	84.321	ENSRROG00000029488	SCAF4	100	85.105	Rhinopithecus_roxellana
ENSMODG00000021040	SCAF4	100	96.577	ENSSHAG00000001581	SCAF4	100	96.577	Sarcophilus_harrisii
ENSMODG00000021040	SCAF4	86	49.704	ENSSFOG00015006338	scaf4a	54	60.152	Scleropages_formosus
ENSMODG00000021040	SCAF4	73	54.489	ENSSMAG00000003738	scaf4b	65	59.420	Scophthalmus_maximus
ENSMODG00000021040	SCAF4	81	54.923	ENSSMAG00000017901	scaf4a	54	55.420	Scophthalmus_maximus
ENSMODG00000021040	SCAF4	53	56.587	ENSSDUG00000012380	scaf4b	59	70.253	Seriola_dumerili
ENSMODG00000021040	SCAF4	53	56.587	ENSSLDG00000023152	-	59	70.253	Seriola_lalandi_dorsalis
ENSMODG00000021040	SCAF4	99	81.517	ENSSARG00000009994	SCAF4	100	81.944	Sorex_araneus
ENSMODG00000021040	SCAF4	100	81.450	ENSSSCG00000021023	SCAF4	63	86.695	Sus_scrofa
ENSMODG00000021040	SCAF4	75	71.939	ENSTGUG00000013464	SCAF4	95	76.294	Taeniopygia_guttata
ENSMODG00000021040	SCAF4	66	54.417	ENSTNIG00000009945	scaf4a	53	70.414	Tetraodon_nigroviridis
ENSMODG00000021040	SCAF4	99	84.085	ENSTTRG00000010963	SCAF4	100	84.792	Tursiops_truncatus
ENSMODG00000021040	SCAF4	100	82.968	ENSUAMG00000008860	SCAF4	63	88.051	Ursus_americanus
ENSMODG00000021040	SCAF4	99	86.893	ENSUMAG00000016962	SCAF4	100	87.901	Ursus_maritimus
ENSMODG00000021040	SCAF4	99	85.231	ENSVVUG00000002953	SCAF4	100	85.765	Vulpes_vulpes