EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMODG00000021076 (Gene tree)
Gene ID: 100027200
Gene Symbol: URB1
Alias: C21orf108|KIAA0539|NPA1
Full Name: URB1 ribosome biogenesis homolog
Gene Type: protein_coding
Species: Monodelphis_domestica
Status: putative
Strand: Plus strand
Length: 113205 bases
Position: chr4:15764062-15877266
Accession: 100027200
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMODP00000026354	Npa1	PF11707.8	3.4e-86	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMODT00000026823	URB1-201	9631	-	ENSMODP00000026354	2268 (aa)	XP_007493354	F6V171

Gene Model

Click here to download ENSMODG00000021076's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMODG00000021076's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMODG00000021076	URB1	99	64.895	ENSG00000142207	URB1	99	64.768	Homo_sapiens
ENSMODG00000021076	URB1	99	42.614	ENSAPOG00000020308	urb1	99	42.614	Acanthochromis_polyacanthus
ENSMODG00000021076	URB1	99	63.361	ENSAMEG00000011998	URB1	99	63.361	Ailuropoda_melanoleuca
ENSMODG00000021076	URB1	95	43.452	ENSACIG00000003248	urb1	97	43.590	Amphilophus_citrinellus
ENSMODG00000021076	URB1	99	40.760	ENSAOCG00000010364	urb1	99	40.760	Amphiprion_ocellaris
ENSMODG00000021076	URB1	99	42.092	ENSAPEG00000010758	urb1	99	42.092	Amphiprion_percula
ENSMODG00000021076	URB1	99	43.267	ENSATEG00000011790	urb1	99	43.267	Anabas_testudineus
ENSMODG00000021076	URB1	97	58.879	ENSAPLG00000012791	URB1	99	59.150	Anas_platyrhynchos
ENSMODG00000021076	URB1	99	55.070	ENSACAG00000002817	URB1	99	55.332	Anolis_carolinensis
ENSMODG00000021076	URB1	99	64.167	ENSANAG00000024617	URB1	99	64.298	Aotus_nancymaae
ENSMODG00000021076	URB1	99	44.738	ENSACLG00000024865	urb1	99	44.425	Astatotilapia_calliptera
ENSMODG00000021076	URB1	99	39.938	ENSAMXG00000012306	urb1	99	39.738	Astyanax_mexicanus
ENSMODG00000021076	URB1	99	61.915	ENSBTAG00000012412	URB1	99	62.046	Bos_taurus
ENSMODG00000021076	URB1	100	63.974	ENSCJAG00000009118	URB1	99	64.105	Callithrix_jacchus
ENSMODG00000021076	URB1	99	64.523	ENSCAFG00000008892	URB1	99	64.523	Canis_familiaris
ENSMODG00000021076	URB1	99	64.170	ENSCAFG00020025987	-	99	64.170	Canis_lupus_dingo
ENSMODG00000021076	URB1	99	63.365	ENSCAFG00020025994	-	99	63.365	Canis_lupus_dingo
ENSMODG00000021076	URB1	99	61.067	ENSCHIG00000015645	URB1	99	61.067	Capra_hircus
ENSMODG00000021076	URB1	99	64.358	ENSTSYG00000013286	URB1	99	64.402	Carlito_syrichta
ENSMODG00000021076	URB1	98	60.872	ENSCAPG00000015589	URB1	99	60.872	Cavia_aperea
ENSMODG00000021076	URB1	99	61.623	ENSCPOG00000006748	URB1	99	61.623	Cavia_porcellus
ENSMODG00000021076	URB1	100	64.333	ENSCCAG00000021299	URB1	99	64.392	Cebus_capucinus
ENSMODG00000021076	URB1	100	64.592	ENSCATG00000042630	URB1	99	64.724	Cercocebus_atys
ENSMODG00000021076	URB1	100	62.057	ENSCLAG00000005262	URB1	99	62.057	Chinchilla_lanigera
ENSMODG00000021076	URB1	100	63.918	ENSCSAG00000009584	URB1	99	64.049	Chlorocebus_sabaeus
ENSMODG00000021076	URB1	99	61.683	ENSCPBG00000006454	URB1	99	61.878	Chrysemys_picta_bellii
ENSMODG00000021076	URB1	100	64.636	ENSCANG00000031088	URB1	99	64.768	Colobus_angolensis_palliatus
ENSMODG00000021076	URB1	99	61.474	ENSCGRG00001010616	Urb1	99	61.218	Cricetulus_griseus_chok1gshd
ENSMODG00000021076	URB1	98	61.407	ENSCGRG00000015840	Urb1	99	61.290	Cricetulus_griseus_crigri
ENSMODG00000021076	URB1	99	41.831	ENSCSEG00000012616	urb1	99	41.831	Cynoglossus_semilaevis
ENSMODG00000021076	URB1	95	52.211	ENSCVAG00000009076	urb1	98	52.687	Cyprinodon_variegatus
ENSMODG00000021076	URB1	98	43.640	ENSDARG00000060308	urb1	99	43.728	Danio_rerio
ENSMODG00000021076	URB1	85	65.617	ENSDNOG00000015586	URB1	99	65.617	Dasypus_novemcinctus
ENSMODG00000021076	URB1	100	62.549	ENSDORG00000006735	Urb1	99	62.593	Dipodomys_ordii
ENSMODG00000021076	URB1	90	68.927	ENSETEG00000009080	URB1	90	68.927	Echinops_telfairi
ENSMODG00000021076	URB1	100	63.776	ENSEASG00005007711	URB1	99	63.776	Equus_asinus_asinus
ENSMODG00000021076	URB1	97	72.386	ENSECAG00000013206	URB1	99	71.928	Equus_caballus
ENSMODG00000021076	URB1	54	77.917	ENSEEUG00000003626	-	55	77.917	Erinaceus_europaeus
ENSMODG00000021076	URB1	99	43.777	ENSELUG00000020516	urb1	99	43.821	Esox_lucius
ENSMODG00000021076	URB1	99	63.624	ENSFCAG00000002177	URB1	99	63.756	Felis_catus
ENSMODG00000021076	URB1	98	51.441	ENSFALG00000004636	URB1	99	51.617	Ficedula_albicollis
ENSMODG00000021076	URB1	99	62.571	ENSFDAG00000007288	URB1	95	62.571	Fukomys_damarensis
ENSMODG00000021076	URB1	99	41.025	ENSFHEG00000000202	urb1	99	41.621	Fundulus_heteroclitus
ENSMODG00000021076	URB1	92	46.986	ENSGMOG00000001838	urb1	93	46.986	Gadus_morhua
ENSMODG00000021076	URB1	99	58.435	ENSGALG00000015887	URB1	99	58.435	Gallus_gallus
ENSMODG00000021076	URB1	94	52.095	ENSGAFG00000020694	urb1	98	52.095	Gambusia_affinis
ENSMODG00000021076	URB1	99	44.577	ENSGACG00000011703	urb1	99	44.577	Gasterosteus_aculeatus
ENSMODG00000021076	URB1	99	61.310	ENSGAGG00000022544	URB1	99	61.310	Gopherus_agassizii
ENSMODG00000021076	URB1	100	64.549	ENSGGOG00000000285	URB1	99	64.549	Gorilla_gorilla
ENSMODG00000021076	URB1	99	44.606	ENSHBUG00000001904	urb1	99	44.294	Haplochromis_burtoni
ENSMODG00000021076	URB1	99	61.538	ENSHGLG00000004907	URB1	99	61.538	Heterocephalus_glaber_female
ENSMODG00000021076	URB1	99	62.128	ENSHGLG00100010749	URB1	99	62.128	Heterocephalus_glaber_male
ENSMODG00000021076	URB1	69	52.047	ENSHCOG00000018683	urb1	97	52.437	Hippocampus_comes
ENSMODG00000021076	URB1	98	40.764	ENSIPUG00000014721	urb1	98	40.853	Ictalurus_punctatus
ENSMODG00000021076	URB1	99	64.083	ENSSTOG00000004539	URB1	99	63.939	Ictidomys_tridecemlineatus
ENSMODG00000021076	URB1	94	46.807	ENSKMAG00000006001	urb1	99	46.807	Kryptolebias_marmoratus
ENSMODG00000021076	URB1	97	41.121	ENSLBEG00000027208	urb1	99	41.121	Labrus_bergylta
ENSMODG00000021076	URB1	99	49.502	ENSLACG00000017059	URB1	100	49.459	Latimeria_chalumnae
ENSMODG00000021076	URB1	99	45.686	ENSLOCG00000009190	urb1	99	45.649	Lepisosteus_oculatus
ENSMODG00000021076	URB1	100	64.554	ENSLAFG00000010407	URB1	100	64.554	Loxodonta_africana
ENSMODG00000021076	URB1	100	64.636	ENSMFAG00000034391	URB1	97	64.636	Macaca_fascicularis
ENSMODG00000021076	URB1	100	64.417	ENSMMUG00000010295	URB1	99	64.417	Macaca_mulatta
ENSMODG00000021076	URB1	100	63.169	ENSMNEG00000032981	URB1	99	63.257	Macaca_nemestrina
ENSMODG00000021076	URB1	100	64.417	ENSMLEG00000041435	URB1	99	64.549	Mandrillus_leucophaeus
ENSMODG00000021076	URB1	99	42.976	ENSMAMG00000011238	urb1	99	42.976	Mastacembelus_armatus
ENSMODG00000021076	URB1	99	40.377	ENSMZEG00005011862	urb1	99	40.113	Maylandia_zebra
ENSMODG00000021076	URB1	98	59.182	ENSMGAG00000014512	URB1	99	59.182	Meleagris_gallopavo
ENSMODG00000021076	URB1	93	65.066	ENSMAUG00000010516	Urb1	99	65.793	Mesocricetus_auratus
ENSMODG00000021076	URB1	100	64.245	ENSMICG00000016424	URB1	99	64.376	Microcebus_murinus
ENSMODG00000021076	URB1	99	60.738	ENSMOCG00000012613	Urb1	99	60.738	Microtus_ochrogaster
ENSMODG00000021076	URB1	96	43.156	ENSMALG00000017411	urb1	97	43.156	Monopterus_albus
ENSMODG00000021076	URB1	99	60.683	MGP_CAROLIEiJ_G0020948	Urb1	99	60.683	Mus_caroli
ENSMODG00000021076	URB1	99	61.084	ENSMUSG00000039929	Urb1	99	61.084	Mus_musculus
ENSMODG00000021076	URB1	99	61.148	MGP_PahariEiJ_G0016653	Urb1	99	61.148	Mus_pahari
ENSMODG00000021076	URB1	100	60.822	MGP_SPRETEiJ_G0021854	Urb1	99	60.822	Mus_spretus
ENSMODG00000021076	URB1	100	62.867	ENSMPUG00000001123	URB1	99	62.867	Mustela_putorius_furo
ENSMODG00000021076	URB1	99	61.636	ENSNGAG00000001905	Urb1	99	61.636	Nannospalax_galili
ENSMODG00000021076	URB1	81	44.966	ENSNBRG00000001049	urb1	98	44.966	Neolamprologus_brichardi
ENSMODG00000021076	URB1	99	63.357	ENSNLEG00000026872	URB1	99	63.365	Nomascus_leucogenys
ENSMODG00000021076	URB1	93	84.512	ENSMEUG00000010828	URB1	96	80.129	Notamacropus_eugenii
ENSMODG00000021076	URB1	100	58.056	ENSOPRG00000013482	URB1	100	58.056	Ochotona_princeps
ENSMODG00000021076	URB1	99	61.727	ENSODEG00000002587	URB1	99	61.727	Octodon_degus
ENSMODG00000021076	URB1	99	44.154	ENSONIG00000005599	urb1	99	44.154	Oreochromis_niloticus
ENSMODG00000021076	URB1	99	62.604	ENSOCUG00000009381	URB1	99	62.604	Oryctolagus_cuniculus
ENSMODG00000021076	URB1	99	43.556	ENSORLG00000003429	urb1	99	43.556	Oryzias_latipes
ENSMODG00000021076	URB1	99	43.605	ENSORLG00020013785	urb1	99	43.605	Oryzias_latipes_hni
ENSMODG00000021076	URB1	93	50.140	ENSORLG00015019421	urb1	99	50.140	Oryzias_latipes_hsok
ENSMODG00000021076	URB1	77	50.648	ENSOMEG00000002094	urb1	97	49.823	Oryzias_melastigma
ENSMODG00000021076	URB1	100	63.708	ENSOGAG00000017140	URB1	99	63.795	Otolemur_garnettii
ENSMODG00000021076	URB1	97	62.913	ENSOARG00000013679	URB1	99	62.913	Ovis_aries
ENSMODG00000021076	URB1	100	64.987	ENSPPAG00000003423	URB1	99	64.987	Pan_paniscus
ENSMODG00000021076	URB1	99	63.740	ENSPPRG00000023131	URB1	99	63.872	Panthera_pardus
ENSMODG00000021076	URB1	91	63.976	ENSPTIG00000016125	URB1	97	64.124	Panthera_tigris_altaica
ENSMODG00000021076	URB1	100	64.899	ENSPTRG00000013852	URB1	99	64.899	Pan_troglodytes
ENSMODG00000021076	URB1	100	64.549	ENSPANG00000021964	URB1	99	64.680	Papio_anubis
ENSMODG00000021076	URB1	99	44.875	ENSPKIG00000003683	urb1	98	44.954	Paramormyrops_kingsleyae
ENSMODG00000021076	URB1	99	61.626	ENSPEMG00000021205	Urb1	99	61.626	Peromyscus_maniculatus_bairdii
ENSMODG00000021076	URB1	79	32.241	ENSPMAG00000009733	URB1	100	33.882	Petromyzon_marinus
ENSMODG00000021076	URB1	100	89.863	ENSPCIG00000016350	URB1	100	89.863	Phascolarctos_cinereus
ENSMODG00000021076	URB1	97	42.986	ENSPLAG00000004371	urb1	99	42.986	Poecilia_latipinna
ENSMODG00000021076	URB1	99	43.385	ENSPMEG00000006634	urb1	99	43.385	Poecilia_mexicana
ENSMODG00000021076	URB1	99	43.001	ENSPREG00000013453	urb1	99	43.001	Poecilia_reticulata
ENSMODG00000021076	URB1	99	64.440	ENSPPYG00000011359	URB1	99	64.314	Pongo_abelii
ENSMODG00000021076	URB1	99	55.668	ENSPCAG00000007430	URB1	99	55.687	Procavia_capensis
ENSMODG00000021076	URB1	100	64.608	ENSPCOG00000022695	URB1	99	64.829	Propithecus_coquereli
ENSMODG00000021076	URB1	99	62.335	ENSPVAG00000000889	URB1	99	62.335	Pteropus_vampyrus
ENSMODG00000021076	URB1	99	43.546	ENSPNYG00000010589	urb1	99	43.244	Pundamilia_nyererei
ENSMODG00000021076	URB1	98	40.739	ENSPNAG00000019324	urb1	99	40.521	Pygocentrus_nattereri
ENSMODG00000021076	URB1	99	61.400	ENSRNOG00000002080	Urb1	99	61.488	Rattus_norvegicus
ENSMODG00000021076	URB1	100	64.505	ENSRBIG00000033122	URB1	99	64.724	Rhinopithecus_bieti
ENSMODG00000021076	URB1	100	64.505	ENSRROG00000040237	URB1	99	64.724	Rhinopithecus_roxellana
ENSMODG00000021076	URB1	99	63.860	ENSSBOG00000027672	URB1	99	64.167	Saimiri_boliviensis_boliviensis
ENSMODG00000021076	URB1	100	87.302	ENSSHAG00000005140	URB1	100	87.351	Sarcophilus_harrisii
ENSMODG00000021076	URB1	91	46.366	ENSSFOG00015000339	urb1	98	46.318	Scleropages_formosus
ENSMODG00000021076	URB1	99	43.461	ENSSMAG00000003782	urb1	99	43.505	Scophthalmus_maximus
ENSMODG00000021076	URB1	99	44.526	ENSSDUG00000012313	urb1	99	44.526	Seriola_dumerili
ENSMODG00000021076	URB1	99	44.657	ENSSLDG00000023179	urb1	99	44.657	Seriola_lalandi_dorsalis
ENSMODG00000021076	URB1	99	57.486	ENSSPUG00000012447	URB1	99	57.529	Sphenodon_punctatus
ENSMODG00000021076	URB1	99	44.319	ENSSPAG00000006325	urb1	99	44.435	Stegastes_partitus
ENSMODG00000021076	URB1	100	62.210	ENSSSCG00000032024	URB1	99	62.210	Sus_scrofa
ENSMODG00000021076	URB1	73	59.916	ENSTGUG00000013442	URB1	100	59.916	Taeniopygia_guttata
ENSMODG00000021076	URB1	99	43.419	ENSTRUG00000009372	urb1	99	43.419	Takifugu_rubripes
ENSMODG00000021076	URB1	99	42.218	ENSTNIG00000016277	urb1	99	42.218	Tetraodon_nigroviridis
ENSMODG00000021076	URB1	81	71.594	ENSTBEG00000010044	URB1	80	71.594	Tupaia_belangeri
ENSMODG00000021076	URB1	91	65.031	ENSTTRG00000007712	URB1	92	65.031	Tursiops_truncatus
ENSMODG00000021076	URB1	99	63.449	ENSUAMG00000012231	URB1	99	63.449	Ursus_americanus
ENSMODG00000021076	URB1	91	65.144	ENSUMAG00000017419	URB1	98	64.660	Ursus_maritimus
ENSMODG00000021076	URB1	68	80.952	ENSVPAG00000001164	URB1	68	80.952	Vicugna_pacos
ENSMODG00000021076	URB1	99	64.107	ENSVVUG00000000551	URB1	99	64.107	Vulpes_vulpes
ENSMODG00000021076	URB1	99	51.732	ENSXETG00000009895	urb1	99	51.775	Xenopus_tropicalis
ENSMODG00000021076	URB1	99	41.071	ENSXCOG00000005500	urb1	96	45.511	Xiphophorus_couchianus
ENSMODG00000021076	URB1	99	41.164	ENSXMAG00000007253	urb1	98	45.833	Xiphophorus_maculatus