EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMODG00000023291 (Gene tree)
Gene ID: -
Gene Symbol: SF3B5
Alias: MGC3133|SF3b10|Ysf3
Full Name: splicing factor 3b subunit 5
Gene Type: protein_coding
Species: Monodelphis_domestica
Status: putative
Strand: Minus strand
Length: 19215 bases
Position: chr2:422310600-422329814
Accession: 21083
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMODP00000029340	SF3b10	PF07189.11	1.4e-40	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMODT00000030914	SF3B5-201	1180	-	ENSMODP00000029340	103 (aa)	-	F6VTC6

Gene Model

Click here to download ENSMODG00000023291's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMODG00000023291's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMODG00000023291	SF3B5	83	100.000	ENSG00000169976	SF3B5	100	100.000	Homo_sapiens
ENSMODG00000023291	SF3B5	83	91.765	ENSAPOG00000001721	sf3b5	99	91.765	Acanthochromis_polyacanthus
ENSMODG00000023291	SF3B5	83	94.118	ENSACIG00000008106	sf3b5	99	94.118	Amphilophus_citrinellus
ENSMODG00000023291	SF3B5	83	91.765	ENSAOCG00000023367	sf3b5	99	91.765	Amphiprion_ocellaris
ENSMODG00000023291	SF3B5	83	91.765	ENSAPEG00000004605	sf3b5	99	91.765	Amphiprion_percula
ENSMODG00000023291	SF3B5	83	92.941	ENSATEG00000009720	sf3b5	99	92.941	Anabas_testudineus
ENSMODG00000023291	SF3B5	83	96.512	ENSACAG00000007948	SF3B5	100	96.512	Anolis_carolinensis
ENSMODG00000023291	SF3B5	83	100.000	ENSANAG00000019999	SF3B5	100	100.000	Aotus_nancymaae
ENSMODG00000023291	SF3B5	83	94.118	ENSACLG00000022410	sf3b5	99	94.118	Astatotilapia_calliptera
ENSMODG00000023291	SF3B5	83	100.000	ENSBTAG00000009795	SF3B5	100	100.000	Bos_taurus
ENSMODG00000023291	SF3B5	83	100.000	ENSCJAG00000046566	SF3B5	100	100.000	Callithrix_jacchus
ENSMODG00000023291	SF3B5	83	100.000	ENSCAFG00000032495	SF3B5	100	100.000	Canis_familiaris
ENSMODG00000023291	SF3B5	83	100.000	ENSCAFG00020000873	SF3B5	100	100.000	Canis_lupus_dingo
ENSMODG00000023291	SF3B5	83	100.000	ENSCHIG00000007987	SF3B5	100	100.000	Capra_hircus
ENSMODG00000023291	SF3B5	83	100.000	ENSTSYG00000012236	SF3B5	100	100.000	Carlito_syrichta
ENSMODG00000023291	SF3B5	83	100.000	ENSCPOG00000012435	SF3B5	100	100.000	Cavia_porcellus
ENSMODG00000023291	SF3B5	83	100.000	ENSCCAG00000006528	SF3B5	100	100.000	Cebus_capucinus
ENSMODG00000023291	SF3B5	83	100.000	ENSCATG00000010192	SF3B5	100	100.000	Cercocebus_atys
ENSMODG00000023291	SF3B5	83	100.000	ENSCLAG00000017802	SF3B5	100	100.000	Chinchilla_lanigera
ENSMODG00000023291	SF3B5	83	100.000	ENSCSAG00000000187	SF3B5	100	100.000	Chlorocebus_sabaeus
ENSMODG00000023291	SF3B5	83	98.837	ENSCPBG00000017148	SF3B5	100	98.837	Chrysemys_picta_bellii
ENSMODG00000023291	SF3B5	81	75.904	ENSCING00000021953	-	97	75.904	Ciona_intestinalis
ENSMODG00000023291	SF3B5	83	100.000	ENSCANG00000002639	SF3B5	100	100.000	Colobus_angolensis_palliatus
ENSMODG00000023291	SF3B5	83	98.837	ENSCGRG00001007249	Sf3b5	100	98.837	Cricetulus_griseus_chok1gshd
ENSMODG00000023291	SF3B5	83	98.837	ENSCGRG00000019185	Sf3b5	100	98.837	Cricetulus_griseus_crigri
ENSMODG00000023291	SF3B5	83	91.860	ENSCSEG00000003216	sf3b5	100	91.860	Cynoglossus_semilaevis
ENSMODG00000023291	SF3B5	83	92.941	ENSCVAG00000005040	sf3b5	99	92.941	Cyprinodon_variegatus
ENSMODG00000023291	SF3B5	83	95.294	ENSDARG00000016855	sf3b5	99	95.294	Danio_rerio
ENSMODG00000023291	SF3B5	92	90.526	ENSDNOG00000048829	SF3B5	90	90.526	Dasypus_novemcinctus
ENSMODG00000023291	SF3B5	83	100.000	ENSDORG00000005838	Sf3b5	100	100.000	Dipodomys_ordii
ENSMODG00000023291	SF3B5	83	83.529	FBgn0040534	Sf3b5	100	83.529	Drosophila_melanogaster
ENSMODG00000023291	SF3B5	83	100.000	ENSETEG00000004047	SF3B5	100	100.000	Echinops_telfairi
ENSMODG00000023291	SF3B5	83	82.353	ENSEBUG00000002311	sf3b5	100	82.353	Eptatretus_burgeri
ENSMODG00000023291	SF3B5	83	100.000	ENSEASG00005009522	SF3B5	100	100.000	Equus_asinus_asinus
ENSMODG00000023291	SF3B5	83	100.000	ENSECAG00000005457	SF3B5	100	100.000	Equus_caballus
ENSMODG00000023291	SF3B5	83	91.765	ENSELUG00000014290	SF3B5	99	91.765	Esox_lucius
ENSMODG00000023291	SF3B5	83	100.000	ENSFCAG00000000936	SF3B5	100	100.000	Felis_catus
ENSMODG00000023291	SF3B5	83	95.349	ENSFALG00000015012	SF3B5	100	95.349	Ficedula_albicollis
ENSMODG00000023291	SF3B5	83	100.000	ENSFDAG00000003664	SF3B5	100	100.000	Fukomys_damarensis
ENSMODG00000023291	SF3B5	83	92.941	ENSFHEG00000020301	sf3b5	99	92.941	Fundulus_heteroclitus
ENSMODG00000023291	SF3B5	83	92.941	ENSGMOG00000019972	sf3b5	99	92.941	Gadus_morhua
ENSMODG00000023291	SF3B5	83	97.674	ENSGALG00000030824	SF3B5	100	97.674	Gallus_gallus
ENSMODG00000023291	SF3B5	83	92.941	ENSGAFG00000000271	sf3b5	99	92.941	Gambusia_affinis
ENSMODG00000023291	SF3B5	83	92.941	ENSGACG00000010363	sf3b5	99	92.941	Gasterosteus_aculeatus
ENSMODG00000023291	SF3B5	83	98.837	ENSGAGG00000011434	SF3B5	100	98.837	Gopherus_agassizii
ENSMODG00000023291	SF3B5	83	93.023	ENSGAGG00000000646	-	100	93.023	Gopherus_agassizii
ENSMODG00000023291	SF3B5	83	100.000	ENSGGOG00000001537	SF3B5	100	100.000	Gorilla_gorilla
ENSMODG00000023291	SF3B5	83	94.118	ENSHBUG00000008925	sf3b5	99	94.118	Haplochromis_burtoni
ENSMODG00000023291	SF3B5	83	100.000	ENSHGLG00000021406	SF3B5	100	100.000	Heterocephalus_glaber_female
ENSMODG00000023291	SF3B5	83	100.000	ENSHGLG00100020370	SF3B5	100	100.000	Heterocephalus_glaber_male
ENSMODG00000023291	SF3B5	83	91.765	ENSHCOG00000016802	sf3b5	99	91.765	Hippocampus_comes
ENSMODG00000023291	SF3B5	83	91.765	ENSHCOG00000016806	sf3b5	99	91.765	Hippocampus_comes
ENSMODG00000023291	SF3B5	83	91.765	ENSHCOG00000009115	-	99	91.765	Hippocampus_comes
ENSMODG00000023291	SF3B5	83	95.294	ENSIPUG00000015166	sf3b5	99	95.294	Ictalurus_punctatus
ENSMODG00000023291	SF3B5	83	100.000	ENSSTOG00000003347	SF3B5	100	100.000	Ictidomys_tridecemlineatus
ENSMODG00000023291	SF3B5	83	100.000	ENSJJAG00000001857	Sf3b5	100	100.000	Jaculus_jaculus
ENSMODG00000023291	SF3B5	83	92.941	ENSKMAG00000002249	sf3b5	99	92.941	Kryptolebias_marmoratus
ENSMODG00000023291	SF3B5	83	92.941	ENSLBEG00000019847	sf3b5	99	92.941	Labrus_bergylta
ENSMODG00000023291	SF3B5	83	95.349	ENSLACG00000000946	SF3B5	100	95.349	Latimeria_chalumnae
ENSMODG00000023291	SF3B5	83	94.118	ENSLOCG00000017352	sf3b5	99	94.118	Lepisosteus_oculatus
ENSMODG00000023291	SF3B5	83	100.000	ENSLAFG00000032489	SF3B5	100	100.000	Loxodonta_africana
ENSMODG00000023291	SF3B5	83	100.000	ENSMFAG00000029753	SF3B5	100	100.000	Macaca_fascicularis
ENSMODG00000023291	SF3B5	83	100.000	ENSMMUG00000047691	SF3B5	100	100.000	Macaca_mulatta
ENSMODG00000023291	SF3B5	83	100.000	ENSMNEG00000028236	SF3B5	100	100.000	Macaca_nemestrina
ENSMODG00000023291	SF3B5	83	100.000	ENSMLEG00000007622	SF3B5	100	100.000	Mandrillus_leucophaeus
ENSMODG00000023291	SF3B5	83	94.118	ENSMAMG00000021639	sf3b5	99	94.118	Mastacembelus_armatus
ENSMODG00000023291	SF3B5	83	94.118	ENSMZEG00005028115	SF3B5	99	94.118	Maylandia_zebra
ENSMODG00000023291	SF3B5	83	94.118	ENSMZEG00005027408	sf3b5	99	94.118	Maylandia_zebra
ENSMODG00000023291	SF3B5	83	82.353	ENSMZEG00005027407	sf3b5	99	82.353	Maylandia_zebra
ENSMODG00000023291	SF3B5	83	97.674	ENSMGAG00000015849	SF3B5	100	97.674	Meleagris_gallopavo
ENSMODG00000023291	SF3B5	83	98.837	ENSMAUG00000008283	Sf3b5	100	98.837	Mesocricetus_auratus
ENSMODG00000023291	SF3B5	83	100.000	ENSMICG00000014922	SF3B5	100	100.000	Microcebus_murinus
ENSMODG00000023291	SF3B5	83	98.837	ENSMOCG00000001713	Sf3b5	100	98.837	Microtus_ochrogaster
ENSMODG00000023291	SF3B5	83	94.118	ENSMMOG00000007956	sf3b5	99	94.118	Mola_mola
ENSMODG00000023291	SF3B5	76	91.358	ENSMALG00000020357	sf3b5	99	91.358	Monopterus_albus
ENSMODG00000023291	SF3B5	83	98.837	MGP_CAROLIEiJ_G0015120	Sf3b5	100	98.837	Mus_caroli
ENSMODG00000023291	SF3B5	83	98.837	ENSMUSG00000078348	Sf3b5	100	98.837	Mus_musculus
ENSMODG00000023291	SF3B5	83	98.837	MGP_PahariEiJ_G0023739	Sf3b5	100	98.837	Mus_pahari
ENSMODG00000023291	SF3B5	83	98.837	MGP_SPRETEiJ_G0015928	Sf3b5	100	98.837	Mus_spretus
ENSMODG00000023291	SF3B5	83	100.000	ENSMPUG00000018379	SF3B5	100	100.000	Mustela_putorius_furo
ENSMODG00000023291	SF3B5	83	95.349	ENSMLUG00000010802	-	100	95.349	Myotis_lucifugus
ENSMODG00000023291	SF3B5	78	95.000	ENSMLUG00000025546	-	93	95.000	Myotis_lucifugus
ENSMODG00000023291	SF3B5	83	100.000	ENSMLUG00000028504	-	100	100.000	Myotis_lucifugus
ENSMODG00000023291	SF3B5	83	100.000	ENSNGAG00000010732	Sf3b5	100	100.000	Nannospalax_galili
ENSMODG00000023291	SF3B5	83	94.118	ENSNBRG00000014383	sf3b5	99	94.118	Neolamprologus_brichardi
ENSMODG00000023291	SF3B5	83	100.000	ENSNLEG00000019307	SF3B5	100	100.000	Nomascus_leucogenys
ENSMODG00000023291	SF3B5	83	100.000	ENSMEUG00000005445	-	100	100.000	Notamacropus_eugenii
ENSMODG00000023291	SF3B5	83	100.000	ENSMEUG00000005440	-	100	100.000	Notamacropus_eugenii
ENSMODG00000023291	SF3B5	83	98.837	ENSOPRG00000015107	SF3B5	100	98.837	Ochotona_princeps
ENSMODG00000023291	SF3B5	83	100.000	ENSODEG00000019507	SF3B5	100	100.000	Octodon_degus
ENSMODG00000023291	SF3B5	83	94.118	ENSONIG00000020725	sf3b5	99	94.118	Oreochromis_niloticus
ENSMODG00000023291	SF3B5	57	100.000	ENSOANG00000015301	SF3B5	97	100.000	Ornithorhynchus_anatinus
ENSMODG00000023291	SF3B5	83	100.000	ENSOCUG00000008752	SF3B5	100	100.000	Oryctolagus_cuniculus
ENSMODG00000023291	SF3B5	83	95.294	ENSORLG00000004925	sf3b5	99	95.294	Oryzias_latipes
ENSMODG00000023291	SF3B5	83	95.294	ENSORLG00020011625	sf3b5	99	95.294	Oryzias_latipes_hni
ENSMODG00000023291	SF3B5	83	95.294	ENSORLG00015017061	sf3b5	99	95.294	Oryzias_latipes_hsok
ENSMODG00000023291	SF3B5	83	95.294	ENSOMEG00000010620	sf3b5	99	95.294	Oryzias_melastigma
ENSMODG00000023291	SF3B5	83	100.000	ENSOGAG00000012152	SF3B5	100	100.000	Otolemur_garnettii
ENSMODG00000023291	SF3B5	83	96.512	ENSOARG00000002617	SF3B5	100	96.512	Ovis_aries
ENSMODG00000023291	SF3B5	77	98.734	ENSOARG00000019486	-	95	98.734	Ovis_aries
ENSMODG00000023291	SF3B5	83	100.000	ENSPPAG00000012940	SF3B5	100	100.000	Pan_paniscus
ENSMODG00000023291	SF3B5	83	100.000	ENSPPRG00000021262	SF3B5	100	100.000	Panthera_pardus
ENSMODG00000023291	SF3B5	83	100.000	ENSPTIG00000001952	SF3B5	100	100.000	Panthera_tigris_altaica
ENSMODG00000023291	SF3B5	83	100.000	ENSPTRG00000018676	SF3B5	100	100.000	Pan_troglodytes
ENSMODG00000023291	SF3B5	83	100.000	ENSPANG00000034242	SF3B5	100	100.000	Papio_anubis
ENSMODG00000023291	SF3B5	83	94.118	ENSPKIG00000006057	sf3b5	99	94.118	Paramormyrops_kingsleyae
ENSMODG00000023291	SF3B5	83	98.837	ENSPSIG00000001262	SF3B5	100	98.837	Pelodiscus_sinensis
ENSMODG00000023291	SF3B5	83	91.765	ENSPMGG00000014804	sf3b5	99	91.765	Periophthalmus_magnuspinnatus
ENSMODG00000023291	SF3B5	83	98.837	ENSPEMG00000012931	Sf3b5	100	98.837	Peromyscus_maniculatus_bairdii
ENSMODG00000023291	SF3B5	83	90.588	ENSPMAG00000010296	sf3b5	99	90.588	Petromyzon_marinus
ENSMODG00000023291	SF3B5	78	100.000	ENSPCIG00000011344	-	78	100.000	Phascolarctos_cinereus
ENSMODG00000023291	SF3B5	83	79.070	ENSPCIG00000025007	-	100	79.070	Phascolarctos_cinereus
ENSMODG00000023291	SF3B5	83	92.941	ENSPFOG00000019994	sf3b5	99	92.941	Poecilia_formosa
ENSMODG00000023291	SF3B5	83	92.941	ENSPLAG00000008412	sf3b5	99	92.941	Poecilia_latipinna
ENSMODG00000023291	SF3B5	83	92.941	ENSPMEG00000020050	sf3b5	99	92.941	Poecilia_mexicana
ENSMODG00000023291	SF3B5	83	92.941	ENSPREG00000009242	sf3b5	99	92.941	Poecilia_reticulata
ENSMODG00000023291	SF3B5	83	100.000	ENSPPYG00000017068	SF3B5	100	100.000	Pongo_abelii
ENSMODG00000023291	SF3B5	83	100.000	ENSPCAG00000009332	SF3B5	100	100.000	Procavia_capensis
ENSMODG00000023291	SF3B5	83	100.000	ENSPCOG00000013754	SF3B5	100	100.000	Propithecus_coquereli
ENSMODG00000023291	SF3B5	83	94.118	ENSPNYG00000002075	sf3b5	99	94.118	Pundamilia_nyererei
ENSMODG00000023291	SF3B5	83	96.471	ENSPNAG00000004942	sf3b5	99	96.471	Pygocentrus_nattereri
ENSMODG00000023291	SF3B5	83	98.837	ENSRNOG00000014908	Sf3b5	100	98.837	Rattus_norvegicus
ENSMODG00000023291	SF3B5	83	100.000	ENSRBIG00000006301	SF3B5	100	100.000	Rhinopithecus_bieti
ENSMODG00000023291	SF3B5	83	100.000	ENSRROG00000037067	SF3B5	100	100.000	Rhinopithecus_roxellana
ENSMODG00000023291	SF3B5	83	100.000	ENSSBOG00000006122	SF3B5	100	100.000	Saimiri_boliviensis_boliviensis
ENSMODG00000023291	SF3B5	83	98.837	ENSSHAG00000015670	SF3B5	100	98.837	Sarcophilus_harrisii
ENSMODG00000023291	SF3B5	83	95.294	ENSSFOG00015015767	sf3b5	99	95.294	Scleropages_formosus
ENSMODG00000023291	SF3B5	83	91.765	ENSSMAG00000018852	sf3b5	99	91.765	Scophthalmus_maximus
ENSMODG00000023291	SF3B5	83	92.941	ENSSDUG00000018161	sf3b5	99	92.941	Seriola_dumerili
ENSMODG00000023291	SF3B5	83	92.941	ENSSLDG00000014547	sf3b5	99	92.941	Seriola_lalandi_dorsalis
ENSMODG00000023291	SF3B5	83	100.000	ENSSARG00000007820	SF3B5	100	100.000	Sorex_araneus
ENSMODG00000023291	SF3B5	83	91.765	ENSSPAG00000009244	sf3b5	99	91.765	Stegastes_partitus
ENSMODG00000023291	SF3B5	83	91.765	ENSSPAG00000017371	-	99	91.765	Stegastes_partitus
ENSMODG00000023291	SF3B5	83	100.000	ENSSSCG00000035578	SF3B5	100	100.000	Sus_scrofa
ENSMODG00000023291	SF3B5	83	97.674	ENSTGUG00000010810	SF3B5	100	97.674	Taeniopygia_guttata
ENSMODG00000023291	SF3B5	83	90.698	ENSTRUG00000005577	sf3b5	100	90.698	Takifugu_rubripes
ENSMODG00000023291	SF3B5	83	90.698	ENSTNIG00000001265	sf3b5	100	90.698	Tetraodon_nigroviridis
ENSMODG00000023291	SF3B5	83	98.837	ENSTBEG00000003072	SF3B5	100	98.837	Tupaia_belangeri
ENSMODG00000023291	SF3B5	83	100.000	ENSTTRG00000008817	SF3B5	100	100.000	Tursiops_truncatus
ENSMODG00000023291	SF3B5	83	100.000	ENSUAMG00000027296	SF3B5	100	100.000	Ursus_americanus
ENSMODG00000023291	SF3B5	83	100.000	ENSUMAG00000005448	SF3B5	100	100.000	Ursus_maritimus
ENSMODG00000023291	SF3B5	83	100.000	ENSVPAG00000003826	SF3B5	100	100.000	Vicugna_pacos
ENSMODG00000023291	SF3B5	83	100.000	ENSVVUG00000004703	SF3B5	100	100.000	Vulpes_vulpes
ENSMODG00000023291	SF3B5	83	95.349	ENSXETG00000021409	sf3b5	100	95.349	Xenopus_tropicalis
ENSMODG00000023291	SF3B5	83	92.941	ENSXMAG00000019971	sf3b5	99	92.941	Xiphophorus_maculatus