EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMODG00000023328 (Gene tree)
Gene ID: 100031566
Gene Symbol: LSM10
Alias: MGC15749
Full Name: LSM10%2C U7 small nuclear RNA associated
Gene Type: protein_coding
Species: Monodelphis_domestica
Status: putative
Strand: Minus strand
Length: 372 bases
Position: chr4:419393340-419393711
Accession: 100031566
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMODP00000029510	LSM	PF01423.22	2.5e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMODT00000031084	LSM10-201	372	-	ENSMODP00000029510	123 (aa)	XP_003341185	F6V8Y0

Gene Model

Click here to download ENSMODG00000023328's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMODG00000023328's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMODG00000023328	LSM10	60	33.784	ENSMODG00000021487	SNRPD1	63	32.877
ENSMODG00000023328	LSM10	57	30.137	ENSMODG00000015177	LSM2	77	30.137

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMODG00000023328	LSM10	100	81.301	ENSG00000181817	LSM10	100	81.301	Homo_sapiens
ENSMODG00000023328	LSM10	100	83.740	ENSAMEG00000019854	LSM10	100	83.740	Ailuropoda_melanoleuca
ENSMODG00000023328	LSM10	97	71.429	ENSACIG00000015420	oscp1a	78	71.429	Amphilophus_citrinellus
ENSMODG00000023328	LSM10	96	72.034	ENSAOCG00000015618	LSM10	98	72.034	Amphiprion_ocellaris
ENSMODG00000023328	LSM10	87	72.477	ENSAOCG00000015607	LSM10	84	72.477	Amphiprion_ocellaris
ENSMODG00000023328	LSM10	96	72.034	ENSAOCG00000014654	-	98	72.034	Amphiprion_ocellaris
ENSMODG00000023328	LSM10	87	72.477	ENSAPEG00000021851	LSM10	84	72.477	Amphiprion_percula
ENSMODG00000023328	LSM10	96	72.034	ENSAPEG00000021845	-	98	72.034	Amphiprion_percula
ENSMODG00000023328	LSM10	94	67.241	ENSATEG00000006310	oscp1a	86	67.241	Anabas_testudineus
ENSMODG00000023328	LSM10	100	69.919	ENSACAG00000001231	LSM10	100	69.919	Anolis_carolinensis
ENSMODG00000023328	LSM10	98	80.992	ENSANAG00000031489	-	99	80.992	Aotus_nancymaae
ENSMODG00000023328	LSM10	100	82.114	ENSANAG00000018759	-	100	82.114	Aotus_nancymaae
ENSMODG00000023328	LSM10	98	71.074	ENSACLG00000004728	oscp1a	98	71.074	Astatotilapia_calliptera
ENSMODG00000023328	LSM10	96	67.797	ENSAMXG00000025301	oscp1a	98	67.797	Astyanax_mexicanus
ENSMODG00000023328	LSM10	98	82.645	ENSBTAG00000024096	LSM10	99	82.645	Bos_taurus
ENSMODG00000023328	LSM10	100	81.301	ENSCJAG00000044880	LSM10	100	81.301	Callithrix_jacchus
ENSMODG00000023328	LSM10	100	86.179	ENSCAFG00000003382	LSM10	100	86.179	Canis_familiaris
ENSMODG00000023328	LSM10	100	86.179	ENSCAFG00020008920	LSM10	100	86.179	Canis_lupus_dingo
ENSMODG00000023328	LSM10	98	82.645	ENSCHIG00000009398	LSM10	99	82.645	Capra_hircus
ENSMODG00000023328	LSM10	100	82.927	ENSCAPG00000012567	LSM10	100	82.927	Cavia_aperea
ENSMODG00000023328	LSM10	100	82.927	ENSCPOG00000039302	LSM10	100	82.927	Cavia_porcellus
ENSMODG00000023328	LSM10	98	80.165	ENSCCAG00000008378	-	98	80.165	Cebus_capucinus
ENSMODG00000023328	LSM10	100	82.114	ENSCCAG00000018913	-	100	82.114	Cebus_capucinus
ENSMODG00000023328	LSM10	100	81.301	ENSCATG00000006589	LSM10	100	81.301	Cercocebus_atys
ENSMODG00000023328	LSM10	100	84.553	ENSCLAG00000008633	LSM10	100	84.553	Chinchilla_lanigera
ENSMODG00000023328	LSM10	100	81.301	ENSCSAG00000000134	LSM10	100	81.301	Chlorocebus_sabaeus
ENSMODG00000023328	LSM10	100	80.800	ENSCHOG00000008615	LSM10	100	80.800	Choloepus_hoffmanni
ENSMODG00000023328	LSM10	83	31.373	ENSCSAVG00000001896	-	87	31.373	Ciona_savignyi
ENSMODG00000023328	LSM10	100	81.301	ENSCANG00000019928	LSM10	100	81.301	Colobus_angolensis_palliatus
ENSMODG00000023328	LSM10	98	83.471	ENSCGRG00001004317	-	99	83.471	Cricetulus_griseus_chok1gshd
ENSMODG00000023328	LSM10	93	75.214	ENSCGRG00001022673	-	94	75.214	Cricetulus_griseus_chok1gshd
ENSMODG00000023328	LSM10	98	83.471	ENSCGRG00000014935	-	99	83.471	Cricetulus_griseus_crigri
ENSMODG00000023328	LSM10	93	75.214	ENSCGRG00000015514	-	94	75.214	Cricetulus_griseus_crigri
ENSMODG00000023328	LSM10	96	66.949	ENSCSEG00000010374	oscp1a	79	66.949	Cynoglossus_semilaevis
ENSMODG00000023328	LSM10	96	66.102	ENSCVAG00000001536	oscp1a	89	66.102	Cyprinodon_variegatus
ENSMODG00000023328	LSM10	69	72.941	ENSDARG00000109563	CABZ01074453.1	99	72.941	Danio_rerio
ENSMODG00000023328	LSM10	98	71.074	ENSDARG00000101222	oscp1a	100	71.074	Danio_rerio
ENSMODG00000023328	LSM10	99	85.246	ENSDNOG00000036662	LSM10	99	85.246	Dasypus_novemcinctus
ENSMODG00000023328	LSM10	100	81.301	ENSDORG00000007579	Lsm10	100	81.301	Dipodomys_ordii
ENSMODG00000023328	LSM10	100	82.114	ENSETEG00000005703	LSM10	100	82.114	Echinops_telfairi
ENSMODG00000023328	LSM10	91	52.679	ENSEBUG00000001312	oscp1a	92	52.679	Eptatretus_burgeri
ENSMODG00000023328	LSM10	100	84.553	ENSEASG00005012194	LSM10	100	84.553	Equus_asinus_asinus
ENSMODG00000023328	LSM10	100	85.366	ENSECAG00000005071	LSM10	100	85.366	Equus_caballus
ENSMODG00000023328	LSM10	100	82.927	ENSEEUG00000012032	LSM10	100	82.927	Erinaceus_europaeus
ENSMODG00000023328	LSM10	98	72.727	ENSELUG00000007452	oscp1a	99	72.727	Esox_lucius
ENSMODG00000023328	LSM10	100	78.049	ENSFALG00000000851	LSM10	100	78.049	Ficedula_albicollis
ENSMODG00000023328	LSM10	100	82.927	ENSFDAG00000021056	LSM10	100	82.927	Fukomys_damarensis
ENSMODG00000023328	LSM10	89	69.369	ENSFHEG00000001058	oscp1a	96	69.369	Fundulus_heteroclitus
ENSMODG00000023328	LSM10	89	66.055	ENSGMOG00000019832	oscp1a	92	66.055	Gadus_morhua
ENSMODG00000023328	LSM10	100	80.488	ENSGALG00000002127	LSM10	100	80.488	Gallus_gallus
ENSMODG00000023328	LSM10	94	61.345	ENSGAFG00000016445	oscp1a	95	61.345	Gambusia_affinis
ENSMODG00000023328	LSM10	99	66.393	ENSGACG00000002329	oscp1a	99	66.393	Gasterosteus_aculeatus
ENSMODG00000023328	LSM10	100	77.236	ENSGAGG00000024848	LSM10	100	77.236	Gopherus_agassizii
ENSMODG00000023328	LSM10	100	81.301	ENSGGOG00000003556	LSM10	100	81.301	Gorilla_gorilla
ENSMODG00000023328	LSM10	98	71.074	ENSHBUG00000001722	oscp1a	98	71.074	Haplochromis_burtoni
ENSMODG00000023328	LSM10	100	82.927	ENSHGLG00000011625	LSM10	100	82.927	Heterocephalus_glaber_female
ENSMODG00000023328	LSM10	100	82.927	ENSHGLG00100001769	LSM10	100	82.927	Heterocephalus_glaber_male
ENSMODG00000023328	LSM10	86	67.925	ENSIPUG00000005808	oscp1a	92	67.925	Ictalurus_punctatus
ENSMODG00000023328	LSM10	100	83.740	ENSSTOG00000000606	LSM10	100	83.740	Ictidomys_tridecemlineatus
ENSMODG00000023328	LSM10	96	69.492	ENSKMAG00000012143	oscp1a	98	69.492	Kryptolebias_marmoratus
ENSMODG00000023328	LSM10	98	66.667	ENSLBEG00000017764	oscp1a	98	66.667	Labrus_bergylta
ENSMODG00000023328	LSM10	100	73.171	ENSLACG00000015904	LSM10	95	73.171	Latimeria_chalumnae
ENSMODG00000023328	LSM10	95	72.650	ENSLOCG00000018277	oscp1a	96	72.650	Lepisosteus_oculatus
ENSMODG00000023328	LSM10	100	82.927	ENSLAFG00000009600	LSM10	100	82.927	Loxodonta_africana
ENSMODG00000023328	LSM10	100	81.301	ENSMFAG00000009115	LSM10	100	81.301	Macaca_fascicularis
ENSMODG00000023328	LSM10	100	81.301	ENSMMUG00000017338	LSM10	100	81.301	Macaca_mulatta
ENSMODG00000023328	LSM10	100	81.301	ENSMNEG00000020023	LSM10	100	81.301	Macaca_nemestrina
ENSMODG00000023328	LSM10	100	81.301	ENSMLEG00000025150	LSM10	100	81.301	Mandrillus_leucophaeus
ENSMODG00000023328	LSM10	100	68.293	ENSMAMG00000004427	oscp1a	100	68.293	Mastacembelus_armatus
ENSMODG00000023328	LSM10	98	71.074	ENSMZEG00005026307	oscp1a	98	71.074	Maylandia_zebra
ENSMODG00000023328	LSM10	100	78.862	ENSMGAG00000015707	LSM10	100	78.862	Meleagris_gallopavo
ENSMODG00000023328	LSM10	98	83.471	ENSMAUG00000016624	Lsm10	99	83.471	Mesocricetus_auratus
ENSMODG00000023328	LSM10	98	82.645	ENSMOCG00000021943	Lsm10	99	82.645	Microtus_ochrogaster
ENSMODG00000023328	LSM10	98	67.769	ENSMMOG00000013597	oscp1a	90	67.769	Mola_mola
ENSMODG00000023328	LSM10	52	70.312	ENSMALG00000012661	oscp1a	50	70.312	Monopterus_albus
ENSMODG00000023328	LSM10	98	81.818	MGP_CAROLIEiJ_G0026467	Lsm10	100	83.871	Mus_caroli
ENSMODG00000023328	LSM10	98	82.645	ENSMUSG00000050188	Lsm10	100	84.946	Mus_musculus
ENSMODG00000023328	LSM10	98	82.645	MGP_PahariEiJ_G0028798	Lsm10	100	84.946	Mus_pahari
ENSMODG00000023328	LSM10	98	82.645	MGP_SPRETEiJ_G0027446	Lsm10	100	84.946	Mus_spretus
ENSMODG00000023328	LSM10	100	86.179	ENSMPUG00000018593	LSM10	100	86.179	Mustela_putorius_furo
ENSMODG00000023328	LSM10	100	81.301	ENSMLUG00000023895	LSM10	100	81.301	Myotis_lucifugus
ENSMODG00000023328	LSM10	100	81.301	ENSNGAG00000015011	Lsm10	100	81.301	Nannospalax_galili
ENSMODG00000023328	LSM10	99	71.311	ENSNBRG00000014306	oscp1a	98	71.311	Neolamprologus_brichardi
ENSMODG00000023328	LSM10	100	81.301	ENSNLEG00000033754	LSM10	100	81.301	Nomascus_leucogenys
ENSMODG00000023328	LSM10	100	99.187	ENSMEUG00000006313	LSM10	100	99.187	Notamacropus_eugenii
ENSMODG00000023328	LSM10	100	84.553	ENSOPRG00000001699	LSM10	100	84.553	Ochotona_princeps
ENSMODG00000023328	LSM10	100	84.553	ENSODEG00000019161	LSM10	100	84.553	Octodon_degus
ENSMODG00000023328	LSM10	100	71.545	ENSONIG00000020904	oscp1a	100	71.545	Oreochromis_niloticus
ENSMODG00000023328	LSM10	100	82.927	ENSOANG00000002066	LSM10	100	82.927	Ornithorhynchus_anatinus
ENSMODG00000023328	LSM10	100	83.740	ENSOCUG00000005333	LSM10	100	83.740	Oryctolagus_cuniculus
ENSMODG00000023328	LSM10	97	70.588	ENSORLG00000009504	oscp1a	98	70.588	Oryzias_latipes
ENSMODG00000023328	LSM10	97	70.588	ENSORLG00020016201	oscp1a	98	70.588	Oryzias_latipes_hni
ENSMODG00000023328	LSM10	97	68.908	ENSORLG00015007794	oscp1a	98	68.908	Oryzias_latipes_hsok
ENSMODG00000023328	LSM10	100	83.740	ENSOGAG00000002653	LSM10	100	83.740	Otolemur_garnettii
ENSMODG00000023328	LSM10	98	82.645	ENSOARG00000009596	LSM10	99	82.645	Ovis_aries
ENSMODG00000023328	LSM10	100	81.301	ENSPPAG00000023465	LSM10	100	81.301	Pan_paniscus
ENSMODG00000023328	LSM10	100	86.179	ENSPPRG00000014619	LSM10	100	86.179	Panthera_pardus
ENSMODG00000023328	LSM10	100	86.179	ENSPTIG00000004613	LSM10	100	86.179	Panthera_tigris_altaica
ENSMODG00000023328	LSM10	100	81.301	ENSPTRG00000000539	LSM10	100	81.301	Pan_troglodytes
ENSMODG00000023328	LSM10	100	81.301	ENSPANG00000023172	LSM10	100	81.301	Papio_anubis
ENSMODG00000023328	LSM10	98	68.333	ENSPKIG00000003728	oscp1a	97	68.333	Paramormyrops_kingsleyae
ENSMODG00000023328	LSM10	100	77.236	ENSPSIG00000000590	LSM10	100	77.236	Pelodiscus_sinensis
ENSMODG00000023328	LSM10	63	67.532	ENSPMGG00000015718	oscp1a	100	67.532	Periophthalmus_magnuspinnatus
ENSMODG00000023328	LSM10	84	99.029	ENSPCIG00000014865	LSM10	76	99.029	Phascolarctos_cinereus
ENSMODG00000023328	LSM10	91	70.536	ENSPFOG00000020490	oscp1a	95	70.536	Poecilia_formosa
ENSMODG00000023328	LSM10	94	68.103	ENSPLAG00000016537	oscp1a	89	68.103	Poecilia_latipinna
ENSMODG00000023328	LSM10	88	71.296	ENSPMEG00000000174	oscp1a	94	71.296	Poecilia_mexicana
ENSMODG00000023328	LSM10	94	67.241	ENSPREG00000009899	oscp1a	89	67.241	Poecilia_reticulata
ENSMODG00000023328	LSM10	100	81.301	ENSPPYG00000001539	LSM10	100	81.301	Pongo_abelii
ENSMODG00000023328	LSM10	96	82.203	ENSPCAG00000002520	LSM10	97	82.203	Procavia_capensis
ENSMODG00000023328	LSM10	100	82.927	ENSPVAG00000008644	LSM10	100	82.927	Pteropus_vampyrus
ENSMODG00000023328	LSM10	98	71.074	ENSPNYG00000003138	oscp1a	98	71.074	Pundamilia_nyererei
ENSMODG00000023328	LSM10	95	64.957	ENSPNAG00000028829	oscp1a	97	64.957	Pygocentrus_nattereri
ENSMODG00000023328	LSM10	98	81.818	ENSRNOG00000025716	Lsm10	99	81.818	Rattus_norvegicus
ENSMODG00000023328	LSM10	100	81.301	ENSRBIG00000001561	LSM10	100	81.301	Rhinopithecus_bieti
ENSMODG00000023328	LSM10	100	81.301	ENSRROG00000011414	LSM10	100	81.301	Rhinopithecus_roxellana
ENSMODG00000023328	LSM10	100	82.114	ENSSBOG00000036413	-	100	82.114	Saimiri_boliviensis_boliviensis
ENSMODG00000023328	LSM10	100	98.374	ENSSHAG00000018056	LSM10	100	98.374	Sarcophilus_harrisii
ENSMODG00000023328	LSM10	98	68.595	ENSSFOG00015019954	lsm10	99	68.595	Scleropages_formosus
ENSMODG00000023328	LSM10	96	68.644	ENSSMAG00000001297	oscp1a	100	68.644	Scophthalmus_maximus
ENSMODG00000023328	LSM10	100	67.742	ENSSDUG00000007090	oscp1a	100	67.742	Seriola_dumerili
ENSMODG00000023328	LSM10	97	68.908	ENSSLDG00000000800	oscp1a	98	68.908	Seriola_lalandi_dorsalis
ENSMODG00000023328	LSM10	100	82.400	ENSSARG00000004211	LSM10	100	83.200	Sorex_araneus
ENSMODG00000023328	LSM10	97	71.429	ENSSPAG00000009229	oscp1a	98	71.429	Stegastes_partitus
ENSMODG00000023328	LSM10	100	82.114	ENSSSCG00000038916	LSM10	100	82.114	Sus_scrofa
ENSMODG00000023328	LSM10	99	79.508	ENSTGUG00000001600	-	100	79.508	Taeniopygia_guttata
ENSMODG00000023328	LSM10	99	78.689	ENSTGUG00000001602	-	100	78.689	Taeniopygia_guttata
ENSMODG00000023328	LSM10	98	67.769	ENSTRUG00000010531	oscp1a	98	67.769	Takifugu_rubripes
ENSMODG00000023328	LSM10	100	82.927	ENSTBEG00000016674	LSM10	100	82.927	Tupaia_belangeri
ENSMODG00000023328	LSM10	100	84.553	ENSUAMG00000020265	LSM10	100	84.553	Ursus_americanus
ENSMODG00000023328	LSM10	100	84.553	ENSUMAG00000001438	LSM10	57	84.553	Ursus_maritimus
ENSMODG00000023328	LSM10	100	86.179	ENSVVUG00000023209	LSM10	100	86.179	Vulpes_vulpes
ENSMODG00000023328	LSM10	100	69.106	ENSXETG00000027631	lsm10	100	69.106	Xenopus_tropicalis
ENSMODG00000023328	LSM10	94	65.517	ENSXCOG00000018776	oscp1a	73	65.517	Xiphophorus_couchianus
ENSMODG00000023328	LSM10	88	68.519	ENSXMAG00000019963	oscp1a	86	68.519	Xiphophorus_maculatus