EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSMODG00000023662 (Gene tree)
Gene ID: 100017327
Gene Symbol: POP7
Alias: RPP2|RPP20
Full Name: POP7 homolog%2C ribonuclease P/MRP subunit
Gene Type: protein_coding
Species: Monodelphis_domestica
Status: putative
Strand: Minus strand
Length: 429 bases
Position: chr2:257063274-257063702
Accession: 100017327
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMODP00000005631	Alba	PF01918.21	1.7e-10	1	1
ENSMODP00000005631	Rpp20	PF12328.8	5.9e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMODT00000005750	POP7-201	429	-	ENSMODP00000005631	142 (aa)	XP_007483347	F6R4U7

Gene Model

Click here to download ENSMODG00000023662's gene model file

Pathways

Pathway ID	Pathway Name	Source
mdo03008	Ribosome biogenesis in eukaryotes	KEGG
mdo03013	RNA transport	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMODG00000023662's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMODG00000023662	POP7	100	90.845	ENSG00000172336	POP7	100	87.324	Homo_sapiens
ENSMODG00000023662	POP7	92	73.485	ENSAPOG00000015722	pop7	100	67.361	Acanthochromis_polyacanthus
ENSMODG00000023662	POP7	87	76.190	ENSACIG00000022071	pop7	88	75.397	Amphilophus_citrinellus
ENSMODG00000023662	POP7	91	74.046	ENSAOCG00000021222	pop7	82	73.282	Amphiprion_ocellaris
ENSMODG00000023662	POP7	91	74.046	ENSAPEG00000018819	pop7	82	73.282	Amphiprion_percula
ENSMODG00000023662	POP7	92	73.485	ENSATEG00000017615	pop7	83	72.727	Anabas_testudineus
ENSMODG00000023662	POP7	100	90.141	ENSANAG00000019054	POP7	100	86.620	Aotus_nancymaae
ENSMODG00000023662	POP7	87	76.190	ENSACLG00000018898	pop7	79	75.397	Astatotilapia_calliptera
ENSMODG00000023662	POP7	90	73.846	ENSAMXG00000025789	pop7	88	73.846	Astyanax_mexicanus
ENSMODG00000023662	POP7	100	90.141	ENSCJAG00000015056	POP7	100	86.620	Callithrix_jacchus
ENSMODG00000023662	POP7	100	91.549	ENSCAFG00000014205	POP7	100	88.028	Canis_familiaris
ENSMODG00000023662	POP7	100	91.549	ENSCAFG00020013863	POP7	100	88.028	Canis_lupus_dingo
ENSMODG00000023662	POP7	100	90.141	ENSCHIG00000013484	POP7	100	86.620	Capra_hircus
ENSMODG00000023662	POP7	100	88.732	ENSTSYG00000035016	POP7	100	85.915	Carlito_syrichta
ENSMODG00000023662	POP7	100	92.254	ENSCPOG00000005767	POP7	100	88.732	Cavia_porcellus
ENSMODG00000023662	POP7	100	90.141	ENSCCAG00000008898	POP7	100	86.620	Cebus_capucinus
ENSMODG00000023662	POP7	100	90.141	ENSCATG00000010371	POP7	100	86.620	Cercocebus_atys
ENSMODG00000023662	POP7	100	92.254	ENSCLAG00000001541	POP7	100	88.732	Chinchilla_lanigera
ENSMODG00000023662	POP7	100	90.141	ENSCSAG00000017937	POP7	100	86.620	Chlorocebus_sabaeus
ENSMODG00000023662	POP7	100	90.845	ENSCANG00000000652	POP7	100	87.324	Colobus_angolensis_palliatus
ENSMODG00000023662	POP7	100	89.437	ENSCGRG00001010593	Pop7	100	86.620	Cricetulus_griseus_chok1gshd
ENSMODG00000023662	POP7	100	89.437	ENSCGRG00000019940	Pop7	100	86.620	Cricetulus_griseus_crigri
ENSMODG00000023662	POP7	92	73.485	ENSCSEG00000013197	pop7	96	73.282	Cynoglossus_semilaevis
ENSMODG00000023662	POP7	94	71.324	ENSCVAG00000016728	pop7	85	71.111	Cyprinodon_variegatus
ENSMODG00000023662	POP7	92	69.173	ENSDARG00000036394	pop7	84	68.657	Danio_rerio
ENSMODG00000023662	POP7	100	90.845	ENSDNOG00000031207	POP7	64	87.324	Dasypus_novemcinctus
ENSMODG00000023662	POP7	100	88.732	ENSDORG00000012512	Pop7	100	85.915	Dipodomys_ordii
ENSMODG00000023662	POP7	80	43.220	FBgn0066304	Rpp20	66	42.373	Drosophila_melanogaster
ENSMODG00000023662	POP7	100	87.324	ENSETEG00000007941	POP7	100	84.507	Echinops_telfairi
ENSMODG00000023662	POP7	100	91.549	ENSEASG00005016994	POP7	100	88.028	Equus_asinus_asinus
ENSMODG00000023662	POP7	100	91.549	ENSECAG00000010383	POP7	100	88.028	Equus_caballus
ENSMODG00000023662	POP7	83	72.500	ENSELUG00000023947	pop7	88	71.667	Esox_lucius
ENSMODG00000023662	POP7	100	91.549	ENSFCAG00000006849	POP7	100	88.028	Felis_catus
ENSMODG00000023662	POP7	100	91.549	ENSFDAG00000018839	POP7	100	88.028	Fukomys_damarensis
ENSMODG00000023662	POP7	94	72.059	ENSFHEG00000012595	pop7	85	71.852	Fundulus_heteroclitus
ENSMODG00000023662	POP7	91	72.519	ENSGAFG00000017633	pop7	82	71.756	Gambusia_affinis
ENSMODG00000023662	POP7	88	74.803	ENSGACG00000019931	pop7	79	74.016	Gasterosteus_aculeatus
ENSMODG00000023662	POP7	100	90.845	ENSGGOG00000016492	POP7	100	87.324	Gorilla_gorilla
ENSMODG00000023662	POP7	87	73.016	ENSHBUG00000011987	pop7	90	72.222	Haplochromis_burtoni
ENSMODG00000023662	POP7	100	90.141	ENSHGLG00000018118	POP7	100	86.620	Heterocephalus_glaber_female
ENSMODG00000023662	POP7	100	90.141	ENSHGLG00100007908	POP7	100	86.620	Heterocephalus_glaber_male
ENSMODG00000023662	POP7	90	73.846	ENSHCOG00000010137	pop7	82	73.846	Hippocampus_comes
ENSMODG00000023662	POP7	96	69.014	ENSIPUG00000000411	pop7	90	69.014	Ictalurus_punctatus
ENSMODG00000023662	POP7	100	90.141	ENSSTOG00000030883	POP7	100	87.324	Ictidomys_tridecemlineatus
ENSMODG00000023662	POP7	100	90.845	ENSJJAG00000003989	Pop7	100	88.028	Jaculus_jaculus
ENSMODG00000023662	POP7	91	74.046	ENSKMAG00000010696	pop7	82	73.282	Kryptolebias_marmoratus
ENSMODG00000023662	POP7	89	72.868	ENSLBEG00000008621	pop7	79	70.543	Labrus_bergylta
ENSMODG00000023662	POP7	91	74.046	ENSLBEG00000003483	pop7	89	71.756	Labrus_bergylta
ENSMODG00000023662	POP7	100	69.799	ENSLACG00000010203	POP7	100	69.128	Latimeria_chalumnae
ENSMODG00000023662	POP7	91	74.615	ENSLOCG00000017553	pop7	83	75.573	Lepisosteus_oculatus
ENSMODG00000023662	POP7	100	86.620	ENSLAFG00000030032	POP7	100	83.803	Loxodonta_africana
ENSMODG00000023662	POP7	100	90.141	ENSMFAG00000027783	POP7	100	86.620	Macaca_fascicularis
ENSMODG00000023662	POP7	100	90.141	ENSMMUG00000008581	POP7	100	86.620	Macaca_mulatta
ENSMODG00000023662	POP7	100	90.141	ENSMNEG00000037495	POP7	100	86.620	Macaca_nemestrina
ENSMODG00000023662	POP7	100	90.141	ENSMLEG00000027597	POP7	100	86.620	Mandrillus_leucophaeus
ENSMODG00000023662	POP7	100	70.139	ENSMAMG00000007258	pop7	96	70.423	Mastacembelus_armatus
ENSMODG00000023662	POP7	87	73.016	ENSMZEG00005005138	pop7	90	72.222	Maylandia_zebra
ENSMODG00000023662	POP7	95	72.993	ENSMZEG00005022194	-	88	72.263	Maylandia_zebra
ENSMODG00000023662	POP7	100	88.028	ENSMAUG00000015820	Pop7	100	85.915	Mesocricetus_auratus
ENSMODG00000023662	POP7	100	91.549	ENSMICG00000009398	POP7	100	88.028	Microcebus_murinus
ENSMODG00000023662	POP7	100	90.141	ENSMOCG00000013694	Pop7	100	87.324	Microtus_ochrogaster
ENSMODG00000023662	POP7	91	71.756	ENSMMOG00000014095	pop7	90	73.282	Mola_mola
ENSMODG00000023662	POP7	88	75.591	ENSMALG00000011180	pop7	92	75.397	Monopterus_albus
ENSMODG00000023662	POP7	100	89.437	MGP_CAROLIEiJ_G0027876	Pop7	100	86.620	Mus_caroli
ENSMODG00000023662	POP7	100	89.437	ENSMUSG00000029715	Pop7	100	86.620	Mus_musculus
ENSMODG00000023662	POP7	100	91.549	MGP_PahariEiJ_G0024462	Pop7	100	88.028	Mus_pahari
ENSMODG00000023662	POP7	100	89.437	MGP_SPRETEiJ_G0028881	Pop7	100	86.620	Mus_spretus
ENSMODG00000023662	POP7	100	90.141	ENSMPUG00000019765	POP7	100	86.620	Mustela_putorius_furo
ENSMODG00000023662	POP7	100	88.028	ENSMLUG00000010110	POP7	100	84.507	Myotis_lucifugus
ENSMODG00000023662	POP7	100	88.732	ENSNGAG00000021630	Pop7	100	85.211	Nannospalax_galili
ENSMODG00000023662	POP7	89	74.419	ENSNBRG00000006286	pop7	89	73.643	Neolamprologus_brichardi
ENSMODG00000023662	POP7	100	90.141	ENSNLEG00000011939	POP7	100	87.324	Nomascus_leucogenys
ENSMODG00000023662	POP7	53	92.000	ENSOPRG00000015185	POP7	100	92.000	Ochotona_princeps
ENSMODG00000023662	POP7	100	92.254	ENSODEG00000020363	POP7	100	88.732	Octodon_degus
ENSMODG00000023662	POP7	100	82.394	ENSOANG00000001658	POP7	100	82.394	Ornithorhynchus_anatinus
ENSMODG00000023662	POP7	100	90.141	ENSOCUG00000007818	POP7	100	86.620	Oryctolagus_cuniculus
ENSMODG00000023662	POP7	89	74.419	ENSORLG00000003594	pop7	88	73.643	Oryzias_latipes
ENSMODG00000023662	POP7	94	73.333	ENSORLG00020017530	pop7	79	72.593	Oryzias_latipes_hni
ENSMODG00000023662	POP7	94	72.593	ENSORLG00015015310	pop7	93	71.852	Oryzias_latipes_hsok
ENSMODG00000023662	POP7	88	76.378	ENSOMEG00000003667	pop7	81	75.591	Oryzias_melastigma
ENSMODG00000023662	POP7	100	90.141	ENSOGAG00000009340	POP7	100	87.324	Otolemur_garnettii
ENSMODG00000023662	POP7	100	90.845	ENSPPAG00000015339	POP7	100	87.324	Pan_paniscus
ENSMODG00000023662	POP7	100	91.549	ENSPPRG00000018408	POP7	100	88.028	Panthera_pardus
ENSMODG00000023662	POP7	100	91.549	ENSPTIG00000005807	POP7	100	88.028	Panthera_tigris_altaica
ENSMODG00000023662	POP7	100	90.845	ENSPTRG00000019504	POP7	100	87.324	Pan_troglodytes
ENSMODG00000023662	POP7	100	90.845	ENSPTRG00000047460	-	100	87.324	Pan_troglodytes
ENSMODG00000023662	POP7	100	90.141	ENSPANG00000006196	POP7	100	86.620	Papio_anubis
ENSMODG00000023662	POP7	94	71.852	ENSPKIG00000019869	pop7	76	71.111	Paramormyrops_kingsleyae
ENSMODG00000023662	POP7	75	72.222	ENSPSIG00000000415	POP7	92	70.400	Pelodiscus_sinensis
ENSMODG00000023662	POP7	96	71.223	ENSPMGG00000011142	pop7	96	70.504	Periophthalmus_magnuspinnatus
ENSMODG00000023662	POP7	100	90.141	ENSPEMG00000011583	Pop7	100	87.324	Peromyscus_maniculatus_bairdii
ENSMODG00000023662	POP7	100	95.775	ENSPCIG00000000517	POP7	72	95.775	Phascolarctos_cinereus
ENSMODG00000023662	POP7	91	72.519	ENSPFOG00000019976	pop7	82	71.756	Poecilia_formosa
ENSMODG00000023662	POP7	91	72.519	ENSPLAG00000007700	pop7	82	71.756	Poecilia_latipinna
ENSMODG00000023662	POP7	91	72.519	ENSPMEG00000010673	pop7	82	71.756	Poecilia_mexicana
ENSMODG00000023662	POP7	91	72.519	ENSPREG00000015137	pop7	82	71.756	Poecilia_reticulata
ENSMODG00000023662	POP7	100	90.845	ENSPPYG00000017426	POP7	100	87.324	Pongo_abelii
ENSMODG00000023662	POP7	100	87.324	ENSPCAG00000010445	POP7	100	83.803	Procavia_capensis
ENSMODG00000023662	POP7	100	91.549	ENSPCOG00000009302	POP7	100	88.028	Propithecus_coquereli
ENSMODG00000023662	POP7	85	85.124	ENSPCOG00000018009	-	88	82.645	Propithecus_coquereli
ENSMODG00000023662	POP7	87	73.016	ENSPNYG00000000975	pop7	90	72.222	Pundamilia_nyererei
ENSMODG00000023662	POP7	87	74.603	ENSPNAG00000007206	pop7	86	74.603	Pygocentrus_nattereri
ENSMODG00000023662	POP7	100	90.141	ENSRNOG00000025310	Pop7	100	87.324	Rattus_norvegicus
ENSMODG00000023662	POP7	100	90.845	ENSRBIG00000002671	POP7	100	87.324	Rhinopithecus_bieti
ENSMODG00000023662	POP7	100	91.549	ENSRROG00000028543	POP7	100	88.028	Rhinopithecus_roxellana
ENSMODG00000023662	POP7	100	88.028	ENSSBOG00000005173	POP7	100	84.507	Saimiri_boliviensis_boliviensis
ENSMODG00000023662	POP7	100	95.775	ENSSHAG00000001026	POP7	100	95.775	Sarcophilus_harrisii
ENSMODG00000023662	POP7	89	73.438	ENSSFOG00015007957	pop7	85	72.093	Scleropages_formosus
ENSMODG00000023662	POP7	90	73.077	ENSSMAG00000015536	pop7	91	72.308	Scophthalmus_maximus
ENSMODG00000023662	POP7	99	70.629	ENSSDUG00000022172	pop7	90	69.930	Seriola_dumerili
ENSMODG00000023662	POP7	82	71.429	ENSSLDG00000019818	pop7	91	70.588	Seriola_lalandi_dorsalis
ENSMODG00000023662	POP7	90	73.846	ENSSPAG00000000652	pop7	76	73.077	Stegastes_partitus
ENSMODG00000023662	POP7	100	90.845	ENSSSCG00000007672	POP7	100	88.028	Sus_scrofa
ENSMODG00000023662	POP7	92	71.212	ENSTRUG00000023845	pop7	82	73.282	Takifugu_rubripes
ENSMODG00000023662	POP7	99	68.310	ENSTRUG00000024340	-	99	69.718	Takifugu_rubripes
ENSMODG00000023662	POP7	98	68.085	ENSTNIG00000001259	pop7	88	69.504	Tetraodon_nigroviridis
ENSMODG00000023662	POP7	100	90.845	ENSTBEG00000001849	POP7	100	88.028	Tupaia_belangeri
ENSMODG00000023662	POP7	100	90.141	ENSTTRG00000011012	POP7	100	86.620	Tursiops_truncatus
ENSMODG00000023662	POP7	100	90.845	ENSUAMG00000028076	POP7	100	87.324	Ursus_americanus
ENSMODG00000023662	POP7	100	90.845	ENSUMAG00000010895	POP7	100	87.324	Ursus_maritimus
ENSMODG00000023662	POP7	100	91.549	ENSVVUG00000023472	POP7	100	88.028	Vulpes_vulpes
ENSMODG00000023662	POP7	91	70.992	ENSXCOG00000012016	pop7	81	70.229	Xiphophorus_couchianus
ENSMODG00000023662	POP7	91	72.519	ENSXMAG00000019746	pop7	82	71.756	Xiphophorus_maculatus