EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMODG00000023873 (Gene tree)
Gene ID: 100020787
Gene Symbol: -
Alias: MGC45806
Full Name: RAB42%2C member RAS oncogene family
Gene Type: protein_coding
Species: Monodelphis_domestica
Status: putative
Strand: Plus strand
Length: 10527 bases
Position: chr4:367759495-367770021
Accession: 100020787
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMODP00000032039	MMR_HSR1	PF01926.23	4.5e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMODT00000033613	-	1331	-	ENSMODP00000032039	219 (aa)	XP_007491537	F7G9V9

Gene Model

Click here to download ENSMODG00000023873's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMODG00000023873's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMODG00000023873	-	96	35.349	ENSMODG00000025362	-	99	35.349
ENSMODG00000023873	-	77	35.882	ENSMODG00000004590	NRAS	94	34.973
ENSMODG00000023873	-	93	41.429	ENSMODG00000009810	RAB11A	93	41.429
ENSMODG00000023873	-	90	30.808	ENSMODG00000021443	RAB31	96	30.808
ENSMODG00000023873	-	87	38.947	ENSMODG00000008253	RAB18	90	38.947
ENSMODG00000023873	-	94	30.476	ENSMODG00000008095	RAB7A	96	30.476
ENSMODG00000023873	-	63	53.237	ENSMODG00000016498	-	86	53.237
ENSMODG00000023873	-	78	38.012	ENSMODG00000009675	RAB15	90	35.323
ENSMODG00000023873	-	84	42.703	ENSMODG00000006121	RAB2B	84	42.703
ENSMODG00000023873	-	76	42.515	ENSMODG00000017295	-	68	42.515
ENSMODG00000023873	-	77	38.857	ENSMODG00000013269	RAB33A	72	38.857
ENSMODG00000023873	-	73	33.962	ENSMODG00000018720	RAB23	70	33.333
ENSMODG00000023873	-	93	38.164	ENSMODG00000003841	-	93	38.164
ENSMODG00000023873	-	88	34.375	ENSMODG00000014793	RAB5A	84	38.994
ENSMODG00000023873	-	79	36.782	ENSMODG00000021452	RAB12	50	36.782
ENSMODG00000023873	-	75	34.940	ENSMODG00000001915	RAB7B	81	34.940
ENSMODG00000023873	-	63	35.507	ENSMODG00000016580	HRAS	71	33.548
ENSMODG00000023873	-	84	41.622	ENSMODG00000008556	RAB2A	85	41.622
ENSMODG00000023873	-	72	43.038	ENSMODG00000004506	RAB30	76	43.038
ENSMODG00000023873	-	97	34.842	ENSMODG00000000118	RAB33B	91	34.842
ENSMODG00000023873	-	79	36.416	ENSMODG00000008949	RAB17	78	36.416
ENSMODG00000023873	-	79	35.838	ENSMODG00000018326	CRACR2A	98	35.838
ENSMODG00000023873	-	87	41.885	ENSMODG00000016955	RAB25	87	41.885
ENSMODG00000023873	-	71	36.129	ENSMODG00000025248	-	89	34.302
ENSMODG00000023873	-	79	40.000	ENSMODG00000022797	-	84	40.000
ENSMODG00000023873	-	71	36.129	ENSMODG00000017458	KRAS	89	34.302
ENSMODG00000023873	-	94	39.524	ENSMODG00000019649	RAB14	95	39.524
ENSMODG00000023873	-	95	33.178	ENSMODG00000018494	RAB6B	95	33.178
ENSMODG00000023873	-	88	39.500	ENSMODG00000008371	-	95	39.500
ENSMODG00000023873	-	88	38.021	ENSMODG00000024936	-	91	38.021
ENSMODG00000023873	-	79	43.678	ENSMODG00000003340	RAB1A	83	43.678
ENSMODG00000023873	-	90	31.313	ENSMODG00000016544	RAB22A	96	31.313
ENSMODG00000023873	-	75	41.420	ENSMODG00000011531	RAB9B	82	41.420
ENSMODG00000023873	-	95	34.135	ENSMODG00000007600	RAB6A	95	34.135

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMODG00000023873	-	96	63.981	ENSANAG00000035487	-	98	63.981	Aotus_nancymaae
ENSMODG00000023873	-	96	61.395	ENSBTAG00000021525	-	98	61.395	Bos_taurus
ENSMODG00000023873	-	95	59.420	ENSCPBG00000011245	RAB42	99	59.223	Chrysemys_picta_bellii
ENSMODG00000023873	-	98	64.815	ENSCGRG00001019426	Rab42	99	64.815	Cricetulus_griseus_chok1gshd
ENSMODG00000023873	-	95	64.929	ENSDORG00000023607	Rab42	97	64.929	Dipodomys_ordii
ENSMODG00000023873	-	95	67.453	ENSFCAG00000037124	-	97	67.925	Felis_catus
ENSMODG00000023873	-	97	57.547	ENSGAGG00000004921	RAB42	100	57.547	Gopherus_agassizii
ENSMODG00000023873	-	95	66.351	ENSSTOG00000000084	-	97	66.351	Ictidomys_tridecemlineatus
ENSMODG00000023873	-	98	65.741	ENSMAUG00000020223	Rab42	99	65.741	Mesocricetus_auratus
ENSMODG00000023873	-	95	64.623	ENSMICG00000029915	-	97	65.094	Microcebus_murinus
ENSMODG00000023873	-	98	65.116	ENSMOCG00000021639	Rab42	99	65.116	Microtus_ochrogaster
ENSMODG00000023873	-	98	64.516	ENSNGAG00000015676	Rab42	99	64.516	Nannospalax_galili
ENSMODG00000023873	-	95	64.151	ENSOGAG00000006951	-	97	64.623	Otolemur_garnettii
ENSMODG00000023873	-	95	59.809	ENSPSIG00000006831	RAB42	93	59.809	Pelodiscus_sinensis
ENSMODG00000023873	-	95	65.094	ENSPCOG00000008605	-	97	65.566	Propithecus_coquereli
ENSMODG00000023873	-	95	65.700	ENSSARG00000007565	-	100	65.700	Sorex_araneus
ENSMODG00000023873	-	97	58.140	ENSSPUG00000010337	RAB42	99	58.140	Sphenodon_punctatus
ENSMODG00000023873	-	95	63.551	ENSSSCG00000030432	-	97	63.551	Sus_scrofa