EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMODG00000023881 (Gene tree)
Gene ID: 100031257
Gene Symbol: POLR1D
Alias: MGC9850|RPA16|RPA9|RPAC2|RPO1-3
Full Name: DNA-directed RNA polymerases I and III subunit RPAC2-like
Gene Type: protein_coding
Species: Monodelphis_domestica
Status: putative
Strand: Minus strand
Length: 345 bases
Position: chr2:242057846-242058190
Accession: 100031257
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMODP00000032077	RNA_pol_L_2	PF13656.6	1.4e-29	1	1
ENSMODP00000032077	RNA_pol_L	PF01193.24	4.2e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMODT00000033653	POLR1D-201	345	-	ENSMODP00000032077	114 (aa)	XP_007483032	F7FMY8

Gene Model

Click here to download ENSMODG00000023881's gene model file

Pathways

Pathway ID	Pathway Name	Source
mdo03020	RNA polymerase	KEGG
mdo04623	Cytosolic DNA-sensing pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMODG00000023881's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMODG00000023881	POLR1D	82	31.183	ENSMODG00000013617	-	73	31.183

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMODG00000023881	POLR1D	93	84.906	ENSG00000186184	POLR1D	91	84.906	Homo_sapiens
ENSMODG00000023881	POLR1D	96	72.477	ENSAPOG00000021882	polr1d	96	74.510	Acanthochromis_polyacanthus
ENSMODG00000023881	POLR1D	93	84.906	ENSAMEG00000019095	POLR1D	85	84.906	Ailuropoda_melanoleuca
ENSMODG00000023881	POLR1D	100	73.043	ENSACIG00000013328	polr1d	100	73.043	Amphilophus_citrinellus
ENSMODG00000023881	POLR1D	100	71.930	ENSAOCG00000018500	polr1d	100	71.930	Amphiprion_ocellaris
ENSMODG00000023881	POLR1D	100	71.053	ENSAPEG00000009489	polr1d	100	71.053	Amphiprion_percula
ENSMODG00000023881	POLR1D	100	71.053	ENSATEG00000019322	polr1d	100	71.053	Anabas_testudineus
ENSMODG00000023881	POLR1D	98	70.536	ENSACAG00000015753	POLR1D	97	70.536	Anolis_carolinensis
ENSMODG00000023881	POLR1D	93	85.849	ENSANAG00000024486	POLR1D	80	85.849	Aotus_nancymaae
ENSMODG00000023881	POLR1D	100	73.684	ENSACLG00000023805	polr1d	100	73.684	Astatotilapia_calliptera
ENSMODG00000023881	POLR1D	96	72.477	ENSAMXG00000036118	polr1d	95	72.477	Astyanax_mexicanus
ENSMODG00000023881	POLR1D	93	83.019	ENSBTAG00000033252	-	80	83.019	Bos_taurus
ENSMODG00000023881	POLR1D	93	83.019	ENSBTAG00000008642	POLR1D	80	83.019	Bos_taurus
ENSMODG00000023881	POLR1D	72	41.463	WBGene00010230	rpac-19	57	41.463	Caenorhabditis_elegans
ENSMODG00000023881	POLR1D	93	84.906	ENSCJAG00000044669	POLR1D	80	84.906	Callithrix_jacchus
ENSMODG00000023881	POLR1D	93	84.906	ENSCAFG00000006755	POLR1D	80	84.906	Canis_familiaris
ENSMODG00000023881	POLR1D	93	83.962	ENSCHIG00000021910	POLR1D	80	83.962	Capra_hircus
ENSMODG00000023881	POLR1D	95	71.818	ENSTSYG00000034852	-	91	71.818	Carlito_syrichta
ENSMODG00000023881	POLR1D	93	82.075	ENSTSYG00000026817	-	80	82.075	Carlito_syrichta
ENSMODG00000023881	POLR1D	57	73.846	ENSCAPG00000006058	-	66	73.846	Cavia_aperea
ENSMODG00000023881	POLR1D	58	74.242	ENSCPOG00000030450	-	67	74.242	Cavia_porcellus
ENSMODG00000023881	POLR1D	93	67.925	ENSCCAG00000020191	-	77	67.925	Cebus_capucinus
ENSMODG00000023881	POLR1D	93	86.792	ENSCCAG00000021349	-	80	86.792	Cebus_capucinus
ENSMODG00000023881	POLR1D	97	72.973	ENSCATG00000022900	-	83	72.973	Cercocebus_atys
ENSMODG00000023881	POLR1D	93	84.906	ENSCATG00000030710	-	80	84.906	Cercocebus_atys
ENSMODG00000023881	POLR1D	97	80.180	ENSCLAG00000017623	POLR1D	90	80.180	Chinchilla_lanigera
ENSMODG00000023881	POLR1D	88	86.000	ENSCPBG00000004719	POLR1D	99	86.000	Chrysemys_picta_bellii
ENSMODG00000023881	POLR1D	93	82.075	ENSCANG00000037694	-	80	82.075	Colobus_angolensis_palliatus
ENSMODG00000023881	POLR1D	93	84.906	ENSCANG00000028632	-	80	84.906	Colobus_angolensis_palliatus
ENSMODG00000023881	POLR1D	93	84.906	ENSCGRG00001021251	Polr1d	80	84.906	Cricetulus_griseus_chok1gshd
ENSMODG00000023881	POLR1D	93	84.906	ENSCGRG00000011639	Polr1d	80	84.906	Cricetulus_griseus_crigri
ENSMODG00000023881	POLR1D	92	74.286	ENSCSEG00000018268	polr1d	94	71.818	Cynoglossus_semilaevis
ENSMODG00000023881	POLR1D	100	72.807	ENSCVAG00000018527	polr1d	100	72.807	Cyprinodon_variegatus
ENSMODG00000023881	POLR1D	96	69.091	ENSDARG00000037570	polr1d	97	69.091	Danio_rerio
ENSMODG00000023881	POLR1D	93	83.962	ENSDNOG00000046247	-	79	83.962	Dasypus_novemcinctus
ENSMODG00000023881	POLR1D	93	84.906	ENSDNOG00000043676	-	80	84.906	Dasypus_novemcinctus
ENSMODG00000023881	POLR1D	93	83.019	ENSDORG00000029155	Polr1d	80	83.019	Dipodomys_ordii
ENSMODG00000023881	POLR1D	96	37.168	FBgn0086447	l(2)37Cg	94	39.000	Drosophila_melanogaster
ENSMODG00000023881	POLR1D	97	78.378	ENSETEG00000012797	POLR1D	90	78.378	Echinops_telfairi
ENSMODG00000023881	POLR1D	85	67.010	ENSEBUG00000011748	polr1d	66	67.010	Eptatretus_burgeri
ENSMODG00000023881	POLR1D	93	84.906	ENSEASG00005022487	POLR1D	82	84.906	Equus_asinus_asinus
ENSMODG00000023881	POLR1D	92	84.762	ENSEEUG00000013144	POLR1D	85	84.762	Erinaceus_europaeus
ENSMODG00000023881	POLR1D	94	71.963	ENSELUG00000005105	rpac2	94	71.963	Esox_lucius
ENSMODG00000023881	POLR1D	93	84.906	ENSFCAG00000030162	POLR1D	80	84.906	Felis_catus
ENSMODG00000023881	POLR1D	88	80.000	ENSFALG00000011463	POLR1D	99	80.000	Ficedula_albicollis
ENSMODG00000023881	POLR1D	93	82.075	ENSFDAG00000004463	POLR1D	80	82.075	Fukomys_damarensis
ENSMODG00000023881	POLR1D	100	73.684	ENSFHEG00000015410	polr1d	99	73.684	Fundulus_heteroclitus
ENSMODG00000023881	POLR1D	61	72.464	ENSGALG00000007470	POLR1D	68	72.464	Gallus_gallus
ENSMODG00000023881	POLR1D	100	75.439	ENSGAFG00000001693	polr1d	100	75.439	Gambusia_affinis
ENSMODG00000023881	POLR1D	96	72.477	ENSGACG00000018585	polr1d	92	72.477	Gasterosteus_aculeatus
ENSMODG00000023881	POLR1D	100	85.088	ENSGAGG00000008503	POLR1D	100	85.088	Gopherus_agassizii
ENSMODG00000023881	POLR1D	93	84.906	ENSGGOG00000004235	POLR1D	80	84.906	Gorilla_gorilla
ENSMODG00000023881	POLR1D	100	73.684	ENSHBUG00000002111	polr1d	100	73.684	Haplochromis_burtoni
ENSMODG00000023881	POLR1D	93	81.132	ENSHGLG00000003202	POLR1D	80	81.132	Heterocephalus_glaber_female
ENSMODG00000023881	POLR1D	93	81.132	ENSHGLG00100009393	POLR1D	80	81.132	Heterocephalus_glaber_male
ENSMODG00000023881	POLR1D	100	70.175	ENSHCOG00000003258	polr1d	100	70.175	Hippocampus_comes
ENSMODG00000023881	POLR1D	96	76.147	ENSIPUG00000014810	polr1d	95	76.147	Ictalurus_punctatus
ENSMODG00000023881	POLR1D	93	84.906	ENSSTOG00000013877	POLR1D	80	84.906	Ictidomys_tridecemlineatus
ENSMODG00000023881	POLR1D	93	82.075	ENSJJAG00000022671	-	88	82.075	Jaculus_jaculus
ENSMODG00000023881	POLR1D	95	67.593	ENSJJAG00000021667	-	63	67.593	Jaculus_jaculus
ENSMODG00000023881	POLR1D	100	69.298	ENSKMAG00000015256	polr1d	100	69.298	Kryptolebias_marmoratus
ENSMODG00000023881	POLR1D	100	74.561	ENSLBEG00000015919	polr1d	100	74.561	Labrus_bergylta
ENSMODG00000023881	POLR1D	95	73.148	ENSLACG00000006810	POLR1D	89	73.148	Latimeria_chalumnae
ENSMODG00000023881	POLR1D	61	84.058	ENSLOCG00000014976	polr1d	93	84.058	Lepisosteus_oculatus
ENSMODG00000023881	POLR1D	95	84.259	ENSLAFG00000032290	POLR1D	81	84.259	Loxodonta_africana
ENSMODG00000023881	POLR1D	93	84.906	ENSMFAG00000045264	POLR1D	82	84.906	Macaca_fascicularis
ENSMODG00000023881	POLR1D	93	84.906	ENSMMUG00000020386	POLR1D	91	84.906	Macaca_mulatta
ENSMODG00000023881	POLR1D	69	83.544	ENSMMUG00000041570	-	71	83.544	Macaca_mulatta
ENSMODG00000023881	POLR1D	93	84.906	ENSMNEG00000008630	-	80	84.906	Macaca_nemestrina
ENSMODG00000023881	POLR1D	93	69.811	ENSMNEG00000038120	-	78	69.811	Macaca_nemestrina
ENSMODG00000023881	POLR1D	93	76.415	ENSMLEG00000032251	-	79	76.415	Mandrillus_leucophaeus
ENSMODG00000023881	POLR1D	93	84.906	ENSMLEG00000041048	-	80	84.906	Mandrillus_leucophaeus
ENSMODG00000023881	POLR1D	90	74.757	ENSMAMG00000014834	polr1d	96	74.757	Mastacembelus_armatus
ENSMODG00000023881	POLR1D	89	78.431	ENSMZEG00005006638	polr1d	90	78.431	Maylandia_zebra
ENSMODG00000023881	POLR1D	81	81.522	ENSMGAG00000005322	POLR1D	84	81.522	Meleagris_gallopavo
ENSMODG00000023881	POLR1D	93	84.906	ENSMAUG00000001946	Polr1d	80	84.906	Mesocricetus_auratus
ENSMODG00000023881	POLR1D	97	65.766	ENSMICG00000007349	-	83	65.766	Microcebus_murinus
ENSMODG00000023881	POLR1D	93	83.962	ENSMICG00000016883	-	80	83.962	Microcebus_murinus
ENSMODG00000023881	POLR1D	93	83.962	ENSMOCG00000021288	Polr1d	80	83.962	Microtus_ochrogaster
ENSMODG00000023881	POLR1D	100	71.930	ENSMMOG00000009605	polr1d	100	71.930	Mola_mola
ENSMODG00000023881	POLR1D	100	69.298	ENSMALG00000010652	polr1d	100	69.298	Monopterus_albus
ENSMODG00000023881	POLR1D	97	77.477	MGP_CAROLIEiJ_G0028034	Polr1d	83	77.477	Mus_caroli
ENSMODG00000023881	POLR1D	97	77.477	ENSMUSG00000029642	Polr1d	83	77.477	Mus_musculus
ENSMODG00000023881	POLR1D	93	80.189	MGP_PahariEiJ_G0024600	Polr1d	80	80.189	Mus_pahari
ENSMODG00000023881	POLR1D	97	77.477	MGP_SPRETEiJ_G0029032	Polr1d	83	77.477	Mus_spretus
ENSMODG00000023881	POLR1D	95	76.852	ENSMLUG00000004118	-	81	76.852	Myotis_lucifugus
ENSMODG00000023881	POLR1D	93	83.962	ENSMLUG00000027169	-	80	83.962	Myotis_lucifugus
ENSMODG00000023881	POLR1D	97	83.784	ENSNGAG00000006014	Polr1d	96	83.784	Nannospalax_galili
ENSMODG00000023881	POLR1D	100	73.684	ENSNBRG00000020327	polr1d	100	73.684	Neolamprologus_brichardi
ENSMODG00000023881	POLR1D	93	84.906	ENSNLEG00000000358	POLR1D	80	84.906	Nomascus_leucogenys
ENSMODG00000023881	POLR1D	92	82.857	ENSODEG00000005294	-	79	82.857	Octodon_degus
ENSMODG00000023881	POLR1D	92	68.571	ENSODEG00000014801	-	76	68.571	Octodon_degus
ENSMODG00000023881	POLR1D	95	90.741	ENSOANG00000008708	-	100	90.741	Ornithorhynchus_anatinus
ENSMODG00000023881	POLR1D	97	81.982	ENSOCUG00000015706	POLR1D	68	81.982	Oryctolagus_cuniculus
ENSMODG00000023881	POLR1D	100	69.298	ENSORLG00000010257	polr1d	100	69.298	Oryzias_latipes
ENSMODG00000023881	POLR1D	100	69.298	ENSORLG00020000533	polr1d	77	69.298	Oryzias_latipes_hni
ENSMODG00000023881	POLR1D	100	70.175	ENSORLG00015013267	polr1d	75	70.175	Oryzias_latipes_hsok
ENSMODG00000023881	POLR1D	100	69.298	ENSOMEG00000014912	polr1d	76	69.298	Oryzias_melastigma
ENSMODG00000023881	POLR1D	97	82.883	ENSOGAG00000014601	POLR1D	83	82.883	Otolemur_garnettii
ENSMODG00000023881	POLR1D	93	83.962	ENSOARG00000017005	POLR1D	82	83.962	Ovis_aries
ENSMODG00000023881	POLR1D	93	84.906	ENSPPAG00000028138	POLR1D	80	84.906	Pan_paniscus
ENSMODG00000023881	POLR1D	93	84.906	ENSPPRG00000003381	POLR1D	80	84.906	Panthera_pardus
ENSMODG00000023881	POLR1D	97	81.982	ENSPTIG00000018137	POLR1D	83	81.982	Panthera_tigris_altaica
ENSMODG00000023881	POLR1D	93	84.906	ENSPTRG00000005734	POLR1D	80	84.906	Pan_troglodytes
ENSMODG00000023881	POLR1D	93	84.906	ENSPANG00000020259	-	80	84.906	Papio_anubis
ENSMODG00000023881	POLR1D	93	73.585	ENSPANG00000035051	-	79	73.585	Papio_anubis
ENSMODG00000023881	POLR1D	86	74.490	ENSPKIG00000021891	polr1d	95	59.504	Paramormyrops_kingsleyae
ENSMODG00000023881	POLR1D	100	81.579	ENSPSIG00000011822	POLR1D	88	81.579	Pelodiscus_sinensis
ENSMODG00000023881	POLR1D	96	69.725	ENSPMGG00000010359	polr1d	95	69.725	Periophthalmus_magnuspinnatus
ENSMODG00000023881	POLR1D	96	62.385	ENSPMGG00000012998	POLR1D	80	62.385	Periophthalmus_magnuspinnatus
ENSMODG00000023881	POLR1D	93	83.962	ENSPEMG00000006336	-	82	83.962	Peromyscus_maniculatus_bairdii
ENSMODG00000023881	POLR1D	89	61.765	ENSPMAG00000004228	polr1d	86	61.765	Petromyzon_marinus
ENSMODG00000023881	POLR1D	100	99.123	ENSPCIG00000001673	POLR1D	100	99.123	Phascolarctos_cinereus
ENSMODG00000023881	POLR1D	100	75.439	ENSPFOG00000023343	polr1d	100	75.862	Poecilia_formosa
ENSMODG00000023881	POLR1D	100	75.439	ENSPLAG00000009675	polr1d	100	75.439	Poecilia_latipinna
ENSMODG00000023881	POLR1D	100	75.439	ENSPMEG00000004628	polr1d	100	75.439	Poecilia_mexicana
ENSMODG00000023881	POLR1D	100	75.439	ENSPREG00000022032	polr1d	100	75.439	Poecilia_reticulata
ENSMODG00000023881	POLR1D	93	82.075	ENSPCOG00000028175	POLR1D	80	82.075	Propithecus_coquereli
ENSMODG00000023881	POLR1D	100	73.684	ENSPNYG00000000107	polr1d	100	73.684	Pundamilia_nyererei
ENSMODG00000023881	POLR1D	96	66.055	ENSPNAG00000001512	polr1d	92	66.055	Pygocentrus_nattereri
ENSMODG00000023881	POLR1D	93	81.132	ENSRBIG00000000336	-	80	81.132	Rhinopithecus_bieti
ENSMODG00000023881	POLR1D	93	84.906	ENSRBIG00000036378	-	80	84.906	Rhinopithecus_bieti
ENSMODG00000023881	POLR1D	93	82.075	ENSRROG00000026751	-	80	82.075	Rhinopithecus_roxellana
ENSMODG00000023881	POLR1D	93	84.906	ENSRROG00000042232	-	80	84.906	Rhinopithecus_roxellana
ENSMODG00000023881	POLR1D	87	52.525	YNL113W	RPC19	72	52.941	Saccharomyces_cerevisiae
ENSMODG00000023881	POLR1D	83	78.947	ENSSBOG00000030146	-	70	78.947	Saimiri_boliviensis_boliviensis
ENSMODG00000023881	POLR1D	93	85.849	ENSSBOG00000028482	-	80	85.849	Saimiri_boliviensis_boliviensis
ENSMODG00000023881	POLR1D	96	97.273	ENSSHAG00000001190	POLR1D	85	97.273	Sarcophilus_harrisii
ENSMODG00000023881	POLR1D	93	78.302	ENSSFOG00015011375	polr1d	93	78.302	Scleropages_formosus
ENSMODG00000023881	POLR1D	100	71.930	ENSSMAG00000011861	polr1d	100	71.930	Scophthalmus_maximus
ENSMODG00000023881	POLR1D	100	71.053	ENSSDUG00000011930	polr1d	100	71.053	Seriola_dumerili
ENSMODG00000023881	POLR1D	92	73.333	ENSSLDG00000023871	polr1d	89	73.333	Seriola_lalandi_dorsalis
ENSMODG00000023881	POLR1D	93	83.962	ENSSARG00000007840	POLR1D	80	83.962	Sorex_araneus
ENSMODG00000023881	POLR1D	92	79.048	ENSSPUG00000005786	POLR1D	96	75.893	Sphenodon_punctatus
ENSMODG00000023881	POLR1D	100	73.684	ENSSPAG00000011764	polr1d	100	73.684	Stegastes_partitus
ENSMODG00000023881	POLR1D	93	83.019	ENSSSCG00000009310	POLR1D	80	83.019	Sus_scrofa
ENSMODG00000023881	POLR1D	84	81.250	ENSTGUG00000005450	POLR1D	100	81.250	Taeniopygia_guttata
ENSMODG00000023881	POLR1D	100	68.421	ENSTRUG00000019741	polr1d	100	68.421	Takifugu_rubripes
ENSMODG00000023881	POLR1D	97	81.982	ENSTBEG00000007006	POLR1D	90	81.982	Tupaia_belangeri
ENSMODG00000023881	POLR1D	93	84.906	ENSUAMG00000011413	POLR1D	80	84.906	Ursus_americanus
ENSMODG00000023881	POLR1D	93	84.906	ENSUMAG00000016968	POLR1D	83	84.906	Ursus_maritimus
ENSMODG00000023881	POLR1D	93	84.906	ENSVVUG00000009216	POLR1D	80	84.906	Vulpes_vulpes
ENSMODG00000023881	POLR1D	88	81.000	ENSXCOG00000011731	polr1d	77	81.000	Xiphophorus_couchianus
ENSMODG00000023881	POLR1D	88	81.000	ENSXMAG00000017538	polr1d	77	81.000	Xiphophorus_maculatus