EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMODG00000024395 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Monodelphis_domestica
Status: putative
Strand: Minus strand
Length: 1350 bases
Position: chr5:285934168-285935517
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMODP00000033973	EST1_DNA_bind	PF10373.9	2.6e-13	1	1
ENSMODP00000033973	PIN_4	PF13638.6	4.2e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMODT00000035559	-	1350	-	ENSMODP00000033973	450 (aa)	-	F6Z493

Gene Model

Click here to download ENSMODG00000024395's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMODG00000024395's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMODG00000024395	-	100	90.022	ENSMODG00000024463	-	100	90.022
ENSMODG00000024395	-	100	89.135	ENSMODG00000024460	-	100	89.135
ENSMODG00000024395	-	100	90.244	ENSMODG00000024410	-	100	90.244

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMODG00000024395	-	98	52.790	ENSG00000070366	SMG6	100	51.240	Homo_sapiens
ENSMODG00000024395	-	99	40.705	ENSTSYG00000003406	SMG6	87	51.502	Carlito_syrichta
ENSMODG00000024395	-	99	40.900	ENSCPOG00000014878	SMG6	73	50.568	Cavia_porcellus
ENSMODG00000024395	-	99	40.705	ENSCLAG00000006748	SMG6	81	46.154	Chinchilla_lanigera
ENSMODG00000024395	-	98	52.361	ENSCANG00000031764	SMG6	87	51.931	Colobus_angolensis_palliatus
ENSMODG00000024395	-	99	40.900	ENSDORG00000016614	Smg6	81	46.667	Dipodomys_ordii
ENSMODG00000024395	-	99	40.117	ENSFDAG00000015106	SMG6	81	45.128	Fukomys_damarensis
ENSMODG00000024395	-	99	40.509	ENSHGLG00000012882	SMG6	81	46.667	Heterocephalus_glaber_female
ENSMODG00000024395	-	99	40.509	ENSHGLG00100017815	SMG6	81	46.667	Heterocephalus_glaber_male
ENSMODG00000024395	-	99	40.900	ENSSTOG00000028127	SMG6	81	46.667	Ictidomys_tridecemlineatus
ENSMODG00000024395	-	85	40.179	ENSLACG00000003276	SMG6	95	39.955	Latimeria_chalumnae
ENSMODG00000024395	-	68	35.342	ENSMGAG00000017200	-	99	35.342	Meleagris_gallopavo
ENSMODG00000024395	-	99	40.509	MGP_CAROLIEiJ_G0016729	Smg6	81	45.641	Mus_caroli
ENSMODG00000024395	-	99	40.509	ENSMUSG00000038290	Smg6	81	45.641	Mus_musculus
ENSMODG00000024395	-	99	40.509	MGP_PahariEiJ_G0017866	Smg6	81	45.641	Mus_pahari
ENSMODG00000024395	-	99	40.509	MGP_SPRETEiJ_G0017572	Smg6	81	45.641	Mus_spretus
ENSMODG00000024395	-	98	49.784	ENSNGAG00000007287	Smg6	81	43.523	Nannospalax_galili
ENSMODG00000024395	-	98	52.790	ENSNLEG00000017171	SMG6	87	52.361	Nomascus_leucogenys
ENSMODG00000024395	-	99	40.234	ENSODEG00000008038	SMG6	77	48.408	Octodon_degus
ENSMODG00000024395	-	99	40.705	ENSPTIG00000008925	SMG6	87	50.633	Panthera_tigris_altaica
ENSMODG00000024395	-	98	52.790	ENSPTRG00000008544	SMG6	87	52.361	Pan_troglodytes
ENSMODG00000024395	-	99	40.509	ENSPEMG00000020707	Smg6	82	45.641	Peromyscus_maniculatus_bairdii
ENSMODG00000024395	-	98	52.361	ENSRROG00000030423	SMG6	99	41.096	Rhinopithecus_roxellana
ENSMODG00000024395	-	98	42.032	ENSSHAG00000000380	-	100	42.430	Sarcophilus_harrisii