EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMODG00000024460 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Monodelphis_domestica
Status: putative
Strand: Minus strand
Length: 1353 bases
Position: chr5:278965882-278967234
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMODP00000034237	EST1_DNA_bind	PF10373.9	3.5e-13	1	1
ENSMODP00000034237	PIN_4	PF13638.6	6.2e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMODT00000035823	-	1353	-	ENSMODP00000034237	451 (aa)	-	F6YIR5

Gene Model

Click here to download ENSMODG00000024460's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMODG00000024460's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMODG00000024460	-	100	93.348	ENSMODG00000024410	-	100	93.348
ENSMODG00000024460	-	100	96.452	ENSMODG00000024463	-	100	96.452
ENSMODG00000024460	-	100	89.135	ENSMODG00000024395	-	100	89.135

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMODG00000024460	-	99	41.879	ENSG00000070366	SMG6	100	47.934	Homo_sapiens
ENSMODG00000024460	-	99	41.487	ENSTSYG00000003406	SMG6	99	41.487	Carlito_syrichta
ENSMODG00000024460	-	99	42.074	ENSCPOG00000014878	SMG6	73	49.432	Cavia_porcellus
ENSMODG00000024460	-	99	41.879	ENSCLAG00000006748	SMG6	73	48.864	Chinchilla_lanigera
ENSMODG00000024460	-	99	41.879	ENSCANG00000031764	SMG6	99	41.487	Colobus_angolensis_palliatus
ENSMODG00000024460	-	99	42.270	ENSDORG00000016614	Smg6	73	50.000	Dipodomys_ordii
ENSMODG00000024460	-	99	41.487	ENSFDAG00000015106	SMG6	73	48.295	Fukomys_damarensis
ENSMODG00000024460	-	99	41.096	ENSHGLG00000012882	SMG6	73	49.432	Heterocephalus_glaber_female
ENSMODG00000024460	-	99	41.096	ENSHGLG00100017815	SMG6	73	49.432	Heterocephalus_glaber_male
ENSMODG00000024460	-	99	42.074	ENSSTOG00000028127	SMG6	73	49.432	Ictidomys_tridecemlineatus
ENSMODG00000024460	-	85	40.312	ENSLACG00000003276	SMG6	90	46.597	Latimeria_chalumnae
ENSMODG00000024460	-	67	40.000	ENSMGAG00000017200	-	99	40.000	Meleagris_gallopavo
ENSMODG00000024460	-	99	41.879	MGP_CAROLIEiJ_G0016729	Smg6	73	48.864	Mus_caroli
ENSMODG00000024460	-	99	41.879	ENSMUSG00000038290	Smg6	73	48.864	Mus_musculus
ENSMODG00000024460	-	99	41.879	MGP_PahariEiJ_G0017866	Smg6	73	48.864	Mus_pahari
ENSMODG00000024460	-	99	41.879	MGP_SPRETEiJ_G0017572	Smg6	73	48.864	Mus_spretus
ENSMODG00000024460	-	99	40.668	ENSNGAG00000007287	Smg6	73	45.977	Nannospalax_galili
ENSMODG00000024460	-	99	41.879	ENSNLEG00000017171	SMG6	99	41.487	Nomascus_leucogenys
ENSMODG00000024460	-	99	41.602	ENSODEG00000008038	SMG6	77	47.134	Octodon_degus
ENSMODG00000024460	-	99	41.454	ENSPTIG00000008925	SMG6	99	41.454	Panthera_tigris_altaica
ENSMODG00000024460	-	99	41.879	ENSPTRG00000008544	SMG6	99	41.487	Pan_troglodytes
ENSMODG00000024460	-	99	41.683	ENSPEMG00000020707	Smg6	74	48.295	Peromyscus_maniculatus_bairdii
ENSMODG00000024460	-	99	41.879	ENSRROG00000030423	SMG6	99	41.487	Rhinopithecus_roxellana
ENSMODG00000024460	-	98	41.833	ENSSHAG00000000380	-	100	41.833	Sarcophilus_harrisii