EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMODG00000024463 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Monodelphis_domestica
Status: putative
Strand: Plus strand
Length: 1353 bases
Position: chr5:275573330-275574682
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMODP00000034239	EST1_DNA_bind	PF10373.9	1.5e-15	1	1
ENSMODP00000034239	PIN_4	PF13638.6	4.9e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMODT00000035825	-	1353	-	ENSMODP00000034239	451 (aa)	-	F6YIQ0

Gene Model

Click here to download ENSMODG00000024463's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMODG00000024463's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMODG00000024463	-	100	96.452	ENSMODG00000024460	-	100	96.452
ENSMODG00000024463	-	100	90.022	ENSMODG00000024395	-	100	90.022
ENSMODG00000024463	-	100	92.905	ENSMODG00000024410	-	100	92.905

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMODG00000024463	-	99	42.074	ENSG00000070366	SMG6	100	49.587	Homo_sapiens
ENSMODG00000024463	-	99	41.879	ENSTSYG00000003406	SMG6	99	40.971	Carlito_syrichta
ENSMODG00000024463	-	99	41.961	ENSCPOG00000014878	SMG6	73	47.222	Cavia_porcellus
ENSMODG00000024463	-	99	42.074	ENSCLAG00000006748	SMG6	73	46.667	Chinchilla_lanigera
ENSMODG00000024463	-	61	30.909	ENSCSAVG00000007638	-	94	30.909	Ciona_savignyi
ENSMODG00000024463	-	99	42.074	ENSCANG00000031764	SMG6	99	41.683	Colobus_angolensis_palliatus
ENSMODG00000024463	-	99	42.270	ENSDORG00000016614	Smg6	73	49.432	Dipodomys_ordii
ENSMODG00000024463	-	99	41.096	ENSFDAG00000015106	SMG6	73	46.111	Fukomys_damarensis
ENSMODG00000024463	-	99	41.487	ENSHGLG00000012882	SMG6	73	50.000	Heterocephalus_glaber_female
ENSMODG00000024463	-	99	41.487	ENSHGLG00100017815	SMG6	73	50.000	Heterocephalus_glaber_male
ENSMODG00000024463	-	99	42.074	ENSSTOG00000028127	SMG6	73	49.432	Ictidomys_tridecemlineatus
ENSMODG00000024463	-	85	40.179	ENSLACG00000003276	SMG6	90	46.597	Latimeria_chalumnae
ENSMODG00000024463	-	67	39.178	ENSMGAG00000017200	-	99	39.178	Meleagris_gallopavo
ENSMODG00000024463	-	99	42.074	MGP_CAROLIEiJ_G0016729	Smg6	83	45.545	Mus_caroli
ENSMODG00000024463	-	99	42.074	ENSMUSG00000038290	Smg6	73	48.864	Mus_musculus
ENSMODG00000024463	-	99	42.074	MGP_PahariEiJ_G0017866	Smg6	81	45.918	Mus_pahari
ENSMODG00000024463	-	99	42.074	MGP_SPRETEiJ_G0017572	Smg6	73	48.864	Mus_spretus
ENSMODG00000024463	-	99	41.061	ENSNGAG00000007287	Smg6	73	45.977	Nannospalax_galili
ENSMODG00000024463	-	99	42.074	ENSNLEG00000017171	SMG6	99	41.683	Nomascus_leucogenys
ENSMODG00000024463	-	99	41.683	ENSODEG00000008038	SMG6	77	48.077	Octodon_degus
ENSMODG00000024463	-	99	41.650	ENSPTIG00000008925	SMG6	99	41.650	Panthera_tigris_altaica
ENSMODG00000024463	-	99	42.074	ENSPTRG00000008544	SMG6	99	41.683	Pan_troglodytes
ENSMODG00000024463	-	99	41.879	ENSPEMG00000020707	Smg6	74	48.295	Peromyscus_maniculatus_bairdii
ENSMODG00000024463	-	99	42.074	ENSRROG00000030423	SMG6	99	41.683	Rhinopithecus_roxellana
ENSMODG00000024463	-	98	41.434	ENSSHAG00000000380	-	100	41.235	Sarcophilus_harrisii