EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMODG00000024585 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Monodelphis_domestica
Status: putative
Strand: Plus strand
Length: 5271 bases
Position: chr6:147127548-147132818
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMODP00000034717	zf-C2H2	PF00096.26	8.1e-67	1	12
ENSMODP00000034717	zf-C2H2	PF00096.26	8.1e-67	2	12
ENSMODP00000034717	zf-C2H2	PF00096.26	8.1e-67	3	12
ENSMODP00000034717	zf-C2H2	PF00096.26	8.1e-67	4	12
ENSMODP00000034717	zf-C2H2	PF00096.26	8.1e-67	5	12
ENSMODP00000034717	zf-C2H2	PF00096.26	8.1e-67	6	12
ENSMODP00000034717	zf-C2H2	PF00096.26	8.1e-67	7	12
ENSMODP00000034717	zf-C2H2	PF00096.26	8.1e-67	8	12
ENSMODP00000034717	zf-C2H2	PF00096.26	8.1e-67	9	12
ENSMODP00000034717	zf-C2H2	PF00096.26	8.1e-67	10	12
ENSMODP00000034717	zf-C2H2	PF00096.26	8.1e-67	11	12
ENSMODP00000034717	zf-C2H2	PF00096.26	8.1e-67	12	12
ENSMODP00000034717	zf-met	PF12874.7	1.7e-11	1	2
ENSMODP00000034717	zf-met	PF12874.7	1.7e-11	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMODT00000036306	-	1699	-	ENSMODP00000034717	553 (aa)	-	F6PG72

Gene Model

Click here to download ENSMODG00000024585's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMODG00000024585's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMODG00000024585	-	92	51.613	ENSMODG00000027841	ZNF768	92	51.613
ENSMODG00000024585	-	82	44.386	ENSMODG00000008516	-	100	46.190
ENSMODG00000024585	-	75	41.117	ENSMODG00000001880	-	99	41.117
ENSMODG00000024585	-	77	35.797	ENSMODG00000018942	PRDM5	69	35.797
ENSMODG00000024585	-	78	36.593	ENSMODG00000014052	-	99	36.593
ENSMODG00000024585	-	100	47.458	ENSMODG00000023146	-	99	47.458
ENSMODG00000024585	-	100	39.268	ENSMODG00000010532	-	99	39.268
ENSMODG00000024585	-	82	47.229	ENSMODG00000018622	-	98	53.086
ENSMODG00000024585	-	95	43.860	ENSMODG00000028916	-	89	43.860
ENSMODG00000024585	-	80	39.494	ENSMODG00000006238	GZF1	100	39.494
ENSMODG00000024585	-	79	35.336	ENSMODG00000017494	ZNF628	57	34.690

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMODG00000024585	-	75	54.286	ENSAOCG00000022276	-	97	54.286	Amphiprion_ocellaris
ENSMODG00000024585	-	76	44.910	ENSACLG00000026538	-	83	42.936	Astatotilapia_calliptera
ENSMODG00000024585	-	76	51.429	ENSGAGG00000020168	-	73	51.429	Gopherus_agassizii
ENSMODG00000024585	-	77	53.503	ENSGAGG00000005805	-	84	53.503	Gopherus_agassizii
ENSMODG00000024585	-	78	48.168	ENSKMAG00000002448	-	85	48.168	Kryptolebias_marmoratus
ENSMODG00000024585	-	100	47.645	ENSPCIG00000019488	-	80	47.527	Phascolarctos_cinereus
ENSMODG00000024585	-	73	32.770	ENSPFOG00000008519	-	100	32.770	Poecilia_formosa
ENSMODG00000024585	-	75	47.115	ENSPNYG00000018360	-	78	47.115	Pundamilia_nyererei
ENSMODG00000024585	-	84	46.786	ENSSLDG00000018598	-	87	46.786	Seriola_lalandi_dorsalis
ENSMODG00000024585	-	75	47.778	ENSXMAG00000022591	-	74	47.778	Xiphophorus_maculatus