EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMODG00000025027 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Monodelphis_domestica
Status: putative
Strand: Minus strand
Length: 429 bases
Position: chr3:144610525-144610953
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMODP00000036611	RNA_pol_Rpb4	PF03874.16	1.4e-23	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMODT00000038204	-	429	-	ENSMODP00000036611	142 (aa)	-	F6WNY8

Gene Model

Click here to download ENSMODG00000025027's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMODG00000025027's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMODG00000025027	-	100	83.099	ENSMODG00000018653	-	100	83.099
ENSMODG00000025027	-	100	100.000	ENSMODG00000025026	-	100	100.000
ENSMODG00000025027	-	100	99.296	ENSMODG00000025036	-	100	99.296
ENSMODG00000025027	-	100	99.296	ENSMODG00000025034	-	100	99.296
ENSMODG00000025027	-	100	98.592	ENSMODG00000025032	-	100	98.592
ENSMODG00000025027	-	100	99.296	ENSMODG00000025033	-	100	99.296
ENSMODG00000025027	-	100	99.296	ENSMODG00000025031	-	100	99.296
ENSMODG00000025027	-	100	99.296	ENSMODG00000025029	-	100	99.296
ENSMODG00000025027	-	100	100.000	ENSMODG00000025028	-	100	100.000
ENSMODG00000025027	-	100	99.296	ENSMODG00000025035	-	100	99.296
ENSMODG00000025027	-	100	100.000	ENSMODG00000025030	-	100	100.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMODG00000025027	-	100	81.690	ENSG00000144231	POLR2D	100	81.731	Homo_sapiens
ENSMODG00000025027	-	99	75.887	ENSAPOG00000023553	polr2d	98	75.887	Acanthochromis_polyacanthus
ENSMODG00000025027	-	100	80.556	ENSAMEG00000011746	POLR2D	100	80.556	Ailuropoda_melanoleuca
ENSMODG00000025027	-	99	75.887	ENSAOCG00000007295	polr2d	98	75.887	Amphiprion_ocellaris
ENSMODG00000025027	-	99	75.887	ENSAPEG00000018714	polr2d	98	75.887	Amphiprion_percula
ENSMODG00000025027	-	100	77.083	ENSATEG00000020416	polr2d	100	77.083	Anabas_testudineus
ENSMODG00000025027	-	100	81.690	ENSACAG00000005255	POLR2D	100	81.690	Anolis_carolinensis
ENSMODG00000025027	-	100	81.690	ENSANAG00000019959	POLR2D	100	81.690	Aotus_nancymaae
ENSMODG00000025027	-	100	76.389	ENSACLG00000009919	polr2d	100	56.250	Astatotilapia_calliptera
ENSMODG00000025027	-	94	79.699	ENSAMXG00000008954	polr2d	100	76.224	Astyanax_mexicanus
ENSMODG00000025027	-	100	80.986	ENSBTAG00000053244	POLR2D	100	80.986	Bos_taurus
ENSMODG00000025027	-	99	54.930	WBGene00018391	rpb-4	99	54.930	Caenorhabditis_elegans
ENSMODG00000025027	-	100	81.690	ENSCJAG00000042216	-	100	81.690	Callithrix_jacchus
ENSMODG00000025027	-	100	80.986	ENSCJAG00000021814	-	100	80.986	Callithrix_jacchus
ENSMODG00000025027	-	100	81.690	ENSCAFG00000004311	POLR2D	100	81.690	Canis_familiaris
ENSMODG00000025027	-	100	81.690	ENSCAFG00020003617	POLR2D	100	81.690	Canis_lupus_dingo
ENSMODG00000025027	-	100	80.986	ENSCHIG00000025995	POLR2D	100	80.986	Capra_hircus
ENSMODG00000025027	-	82	82.906	ENSTSYG00000036021	POLR2D	100	82.906	Carlito_syrichta
ENSMODG00000025027	-	100	81.690	ENSCPOG00000002571	POLR2D	100	81.690	Cavia_porcellus
ENSMODG00000025027	-	100	81.690	ENSCCAG00000037709	POLR2D	100	81.690	Cebus_capucinus
ENSMODG00000025027	-	100	81.690	ENSCATG00000036749	POLR2D	100	81.690	Cercocebus_atys
ENSMODG00000025027	-	100	81.690	ENSCLAG00000004449	POLR2D	100	81.690	Chinchilla_lanigera
ENSMODG00000025027	-	100	81.690	ENSCSAG00000016861	POLR2D	100	81.690	Chlorocebus_sabaeus
ENSMODG00000025027	-	82	82.906	ENSCHOG00000013850	POLR2D	100	82.906	Choloepus_hoffmanni
ENSMODG00000025027	-	100	80.282	ENSCPBG00000019132	POLR2D	51	80.282	Chrysemys_picta_bellii
ENSMODG00000025027	-	90	78.125	ENSCING00000011474	-	96	78.125	Ciona_intestinalis
ENSMODG00000025027	-	90	77.344	ENSCSAVG00000008353	-	88	77.344	Ciona_savignyi
ENSMODG00000025027	-	100	81.690	ENSCANG00000043665	POLR2D	100	81.690	Colobus_angolensis_palliatus
ENSMODG00000025027	-	100	81.690	ENSCGRG00001013608	Polr2d	100	81.690	Cricetulus_griseus_chok1gshd
ENSMODG00000025027	-	82	82.906	ENSCGRG00000012624	Polr2d	100	82.906	Cricetulus_griseus_crigri
ENSMODG00000025027	-	100	76.389	ENSCSEG00000006147	polr2d	100	76.389	Cynoglossus_semilaevis
ENSMODG00000025027	-	100	76.389	ENSCVAG00000000779	polr2d	100	76.389	Cyprinodon_variegatus
ENSMODG00000025027	-	100	78.169	ENSDARG00000076509	polr2d	100	78.169	Danio_rerio
ENSMODG00000025027	-	100	80.282	ENSDNOG00000008527	POLR2D	100	80.282	Dasypus_novemcinctus
ENSMODG00000025027	-	100	81.690	ENSDORG00000026897	Polr2d	100	81.690	Dipodomys_ordii
ENSMODG00000025027	-	92	65.385	FBgn0263757	Rpb4	94	65.385	Drosophila_melanogaster
ENSMODG00000025027	-	100	77.465	ENSEBUG00000007675	polr2d	100	77.465	Eptatretus_burgeri
ENSMODG00000025027	-	100	80.986	ENSEASG00005007103	POLR2D	100	80.986	Equus_asinus_asinus
ENSMODG00000025027	-	100	81.690	ENSECAG00000000556	POLR2D	100	81.690	Equus_caballus
ENSMODG00000025027	-	99	76.596	ENSELUG00000005928	polr2d	99	76.596	Esox_lucius
ENSMODG00000025027	-	100	81.690	ENSFCAG00000027816	POLR2D	100	81.690	Felis_catus
ENSMODG00000025027	-	100	82.394	ENSFALG00000003528	POLR2D	100	82.394	Ficedula_albicollis
ENSMODG00000025027	-	100	80.986	ENSFDAG00000007217	POLR2D	100	80.986	Fukomys_damarensis
ENSMODG00000025027	-	100	80.420	ENSGMOG00000001823	polr2d	99	80.420	Gadus_morhua
ENSMODG00000025027	-	100	81.690	ENSGALG00000002057	POLR2D	100	81.690	Gallus_gallus
ENSMODG00000025027	-	100	77.083	ENSGAFG00000016932	polr2d	71	77.083	Gambusia_affinis
ENSMODG00000025027	-	100	75.694	ENSGACG00000004639	polr2d	100	75.694	Gasterosteus_aculeatus
ENSMODG00000025027	-	100	80.282	ENSGAGG00000021308	POLR2D	100	80.282	Gopherus_agassizii
ENSMODG00000025027	-	100	81.690	ENSGGOG00000004723	POLR2D	100	81.690	Gorilla_gorilla
ENSMODG00000025027	-	100	81.690	ENSHGLG00000016570	Polr2d	100	81.690	Heterocephalus_glaber_female
ENSMODG00000025027	-	100	81.690	ENSHGLG00100013785	Polr2d	100	81.690	Heterocephalus_glaber_male
ENSMODG00000025027	-	100	73.944	ENSHCOG00000006425	polr2d	100	73.944	Hippocampus_comes
ENSMODG00000025027	-	100	77.465	ENSIPUG00000011192	polr2d	100	77.465	Ictalurus_punctatus
ENSMODG00000025027	-	100	80.282	ENSSTOG00000023329	POLR2D	100	80.282	Ictidomys_tridecemlineatus
ENSMODG00000025027	-	82	76.923	ENSJJAG00000005723	-	94	76.923	Jaculus_jaculus
ENSMODG00000025027	-	100	80.986	ENSJJAG00000015053	-	100	80.986	Jaculus_jaculus
ENSMODG00000025027	-	100	73.239	ENSJJAG00000000783	-	100	73.239	Jaculus_jaculus
ENSMODG00000025027	-	85	78.333	ENSKMAG00000010677	polr2d	68	78.333	Kryptolebias_marmoratus
ENSMODG00000025027	-	100	80.282	ENSLACG00000017253	POLR2D	100	80.282	Latimeria_chalumnae
ENSMODG00000025027	-	100	77.778	ENSLOCG00000009106	polr2d	100	77.778	Lepisosteus_oculatus
ENSMODG00000025027	-	100	80.986	ENSLAFG00000001848	POLR2D	100	80.986	Loxodonta_africana
ENSMODG00000025027	-	100	81.690	ENSMFAG00000031937	POLR2D	100	81.690	Macaca_fascicularis
ENSMODG00000025027	-	100	81.690	ENSMMUG00000001989	POLR2D	100	81.690	Macaca_mulatta
ENSMODG00000025027	-	100	81.690	ENSMNEG00000035505	POLR2D	100	81.690	Macaca_nemestrina
ENSMODG00000025027	-	100	81.690	ENSMLEG00000035827	POLR2D	100	81.690	Mandrillus_leucophaeus
ENSMODG00000025027	-	100	81.690	ENSMGAG00000001248	POLR2D	100	81.690	Meleagris_gallopavo
ENSMODG00000025027	-	100	80.986	ENSMAUG00000014518	Polr2d	100	80.986	Mesocricetus_auratus
ENSMODG00000025027	-	100	80.986	ENSMICG00000009931	POLR2D	100	80.986	Microcebus_murinus
ENSMODG00000025027	-	100	79.577	ENSMOCG00000019367	Polr2d	100	79.577	Microtus_ochrogaster
ENSMODG00000025027	-	100	77.083	ENSMALG00000018266	polr2d	100	77.083	Monopterus_albus
ENSMODG00000025027	-	100	81.690	MGP_CAROLIEiJ_G0022066	Polr2d	100	81.690	Mus_caroli
ENSMODG00000025027	-	100	81.690	ENSMUSG00000024258	Polr2d	100	81.690	Mus_musculus
ENSMODG00000025027	-	100	81.690	MGP_PahariEiJ_G0018800	Polr2d	100	81.690	Mus_pahari
ENSMODG00000025027	-	100	81.690	MGP_SPRETEiJ_G0022977	Polr2d	100	81.690	Mus_spretus
ENSMODG00000025027	-	100	81.690	ENSMPUG00000016685	POLR2D	100	81.690	Mustela_putorius_furo
ENSMODG00000025027	-	83	83.051	ENSMLUG00000006862	POLR2D	100	83.051	Myotis_lucifugus
ENSMODG00000025027	-	100	81.690	ENSNGAG00000014862	Polr2d	100	81.690	Nannospalax_galili
ENSMODG00000025027	-	100	81.690	ENSNLEG00000027191	POLR2D	100	81.690	Nomascus_leucogenys
ENSMODG00000025027	-	82	82.906	ENSOPRG00000005327	POLR2D	100	82.906	Ochotona_princeps
ENSMODG00000025027	-	100	81.690	ENSODEG00000005262	POLR2D	100	81.690	Octodon_degus
ENSMODG00000025027	-	100	77.083	ENSONIG00000017290	polr2d	100	77.083	Oreochromis_niloticus
ENSMODG00000025027	-	83	83.898	ENSOANG00000013216	POLR2D	100	83.898	Ornithorhynchus_anatinus
ENSMODG00000025027	-	100	80.282	ENSOCUG00000023403	-	100	80.282	Oryctolagus_cuniculus
ENSMODG00000025027	-	100	75.524	ENSOCUG00000021449	-	100	75.524	Oryctolagus_cuniculus
ENSMODG00000025027	-	100	73.611	ENSORLG00000005266	polr2d	100	73.611	Oryzias_latipes
ENSMODG00000025027	-	100	73.611	ENSORLG00020006647	polr2d	100	73.611	Oryzias_latipes_hni
ENSMODG00000025027	-	100	73.611	ENSORLG00015003222	polr2d	100	73.611	Oryzias_latipes_hsok
ENSMODG00000025027	-	100	74.306	ENSOMEG00000018915	polr2d	100	74.306	Oryzias_melastigma
ENSMODG00000025027	-	100	79.861	ENSOGAG00000017118	POLR2D	100	79.861	Otolemur_garnettii
ENSMODG00000025027	-	100	80.986	ENSOARG00000015995	POLR2D	100	80.986	Ovis_aries
ENSMODG00000025027	-	100	81.690	ENSPPRG00000020222	POLR2D	100	81.690	Panthera_pardus
ENSMODG00000025027	-	100	81.690	ENSPTIG00000018618	POLR2D	100	81.690	Panthera_tigris_altaica
ENSMODG00000025027	-	100	81.690	ENSPTRG00000012436	POLR2D	100	81.690	Pan_troglodytes
ENSMODG00000025027	-	100	81.690	ENSPANG00000018602	POLR2D	100	81.690	Papio_anubis
ENSMODG00000025027	-	99	78.873	ENSPKIG00000012166	polr2d	99	78.873	Paramormyrops_kingsleyae
ENSMODG00000025027	-	83	83.898	ENSPSIG00000002873	POLR2D	100	83.898	Pelodiscus_sinensis
ENSMODG00000025027	-	100	81.690	ENSPEMG00000018244	Polr2d	100	81.690	Peromyscus_maniculatus_bairdii
ENSMODG00000025027	-	100	74.648	ENSPMAG00000005021	polr2d	99	74.648	Petromyzon_marinus
ENSMODG00000025027	-	100	77.083	ENSPFOG00000008969	polr2d	100	77.083	Poecilia_formosa
ENSMODG00000025027	-	100	77.083	ENSPLAG00000017210	polr2d	100	77.083	Poecilia_latipinna
ENSMODG00000025027	-	100	77.083	ENSPMEG00000005160	polr2d	100	77.083	Poecilia_mexicana
ENSMODG00000025027	-	73	79.808	ENSPREG00000021862	polr2d	100	79.808	Poecilia_reticulata
ENSMODG00000025027	-	100	81.690	ENSPPYG00000012759	POLR2D	100	81.690	Pongo_abelii
ENSMODG00000025027	-	100	80.986	ENSPCAG00000001396	POLR2D	100	80.986	Procavia_capensis
ENSMODG00000025027	-	100	80.986	ENSPCOG00000022076	POLR2D	100	80.986	Propithecus_coquereli
ENSMODG00000025027	-	100	80.986	ENSPVAG00000004002	POLR2D	100	80.986	Pteropus_vampyrus
ENSMODG00000025027	-	100	77.622	ENSPNAG00000018246	polr2d	100	77.622	Pygocentrus_nattereri
ENSMODG00000025027	-	100	81.690	ENSRNOG00000016231	Polr2d	100	81.690	Rattus_norvegicus
ENSMODG00000025027	-	100	81.690	ENSRBIG00000039326	POLR2D	100	81.690	Rhinopithecus_bieti
ENSMODG00000025027	-	100	81.690	ENSRROG00000023289	POLR2D	100	81.690	Rhinopithecus_roxellana
ENSMODG00000025027	-	100	82.394	ENSSHAG00000014817	-	100	82.394	Sarcophilus_harrisii
ENSMODG00000025027	-	92	81.538	ENSSFOG00015024204	polr2d	100	77.778	Scleropages_formosus
ENSMODG00000025027	-	100	77.083	ENSSDUG00000006060	polr2d	100	77.083	Seriola_dumerili
ENSMODG00000025027	-	95	78.519	ENSSLDG00000024485	polr2d	100	76.552	Seriola_lalandi_dorsalis
ENSMODG00000025027	-	82	82.051	ENSSARG00000009037	POLR2D	100	82.051	Sorex_araneus
ENSMODG00000025027	-	100	81.690	ENSSPUG00000014915	POLR2D	100	81.690	Sphenodon_punctatus
ENSMODG00000025027	-	100	77.083	ENSSPAG00000013386	polr2d	100	77.083	Stegastes_partitus
ENSMODG00000025027	-	100	81.690	ENSSSCG00000039230	POLR2D	100	81.690	Sus_scrofa
ENSMODG00000025027	-	100	81.690	ENSTGUG00000005773	POLR2D	99	81.690	Taeniopygia_guttata
ENSMODG00000025027	-	100	76.761	ENSTRUG00000004740	polr2d	100	76.761	Takifugu_rubripes
ENSMODG00000025027	-	100	76.761	ENSTNIG00000011210	polr2d	100	76.761	Tetraodon_nigroviridis
ENSMODG00000025027	-	82	82.906	ENSTBEG00000006081	POLR2D	100	82.906	Tupaia_belangeri
ENSMODG00000025027	-	82	82.906	ENSTTRG00000010055	POLR2D	100	82.906	Tursiops_truncatus
ENSMODG00000025027	-	91	82.171	ENSUAMG00000024374	POLR2D	98	82.171	Ursus_americanus
ENSMODG00000025027	-	83	82.203	ENSUMAG00000008280	POLR2D	100	81.731	Ursus_maritimus
ENSMODG00000025027	-	82	82.906	ENSVPAG00000007239	POLR2D	100	82.906	Vicugna_pacos
ENSMODG00000025027	-	100	81.690	ENSVVUG00000008616	POLR2D	100	81.690	Vulpes_vulpes
ENSMODG00000025027	-	100	76.056	ENSXETG00000002955	polr2d	100	76.056	Xenopus_tropicalis
ENSMODG00000025027	-	73	79.808	ENSXCOG00000012668	polr2d	100	79.808	Xiphophorus_couchianus
ENSMODG00000025027	-	73	79.808	ENSXMAG00000014031	polr2d	100	79.808	Xiphophorus_maculatus