EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSMODG00000025064 (Gene tree)
Gene ID: 100018117
Gene Symbol: LIG4
Alias: -
Full Name: DNA ligase 4
Gene Type: protein_coding
Species: Monodelphis_domestica
Status: putative
Strand: Plus strand
Length: 2736 bases
Position: chr7:85657299-85660034
Accession: 100018117
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMODP00000036738	RNA_ligase	PF09414.10	3.6e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMODT00000038333	LIG4-201	2736	-	ENSMODP00000036738	911 (aa)	XP_007501369	F6SA46

Gene Model

Click here to download ENSMODG00000025064's gene model file

Pathways

Pathway ID	Pathway Name	Source
mdo03450	Non-homologous end-joining	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMODG00000025064's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMODG00000025064	LIG4	100	84.649	ENSG00000174405	LIG4	100	84.479	Homo_sapiens
ENSMODG00000025064	LIG4	99	65.680	ENSAPOG00000000866	lig4	99	65.570	Acanthochromis_polyacanthus
ENSMODG00000025064	LIG4	100	82.456	ENSAMEG00000019685	LIG4	99	81.998	Ailuropoda_melanoleuca
ENSMODG00000025064	LIG4	99	66.923	ENSACIG00000018309	lig4	99	67.033	Amphilophus_citrinellus
ENSMODG00000025064	LIG4	99	65.899	ENSAOCG00000011768	lig4	99	65.789	Amphiprion_ocellaris
ENSMODG00000025064	LIG4	99	66.009	ENSAPEG00000017815	lig4	99	65.899	Amphiprion_percula
ENSMODG00000025064	LIG4	99	65.680	ENSATEG00000005583	lig4	99	65.789	Anabas_testudineus
ENSMODG00000025064	LIG4	97	78.345	ENSAPLG00000001673	LIG4	99	77.866	Anas_platyrhynchos
ENSMODG00000025064	LIG4	99	75.768	ENSACAG00000014566	LIG4	100	75.302	Anolis_carolinensis
ENSMODG00000025064	LIG4	100	83.095	ENSANAG00000012446	LIG4	100	83.095	Aotus_nancymaae
ENSMODG00000025064	LIG4	99	66.923	ENSACLG00000027051	lig4	99	66.923	Astatotilapia_calliptera
ENSMODG00000025064	LIG4	99	65.022	ENSAMXG00000008192	lig4	94	64.590	Astyanax_mexicanus
ENSMODG00000025064	LIG4	100	82.675	ENSBTAG00000015868	LIG4	100	82.217	Bos_taurus
ENSMODG00000025064	LIG4	100	82.547	ENSCJAG00000014689	LIG4	100	82.547	Callithrix_jacchus
ENSMODG00000025064	LIG4	100	84.320	ENSCAFG00000006031	LIG4	100	83.864	Canis_familiaris
ENSMODG00000025064	LIG4	100	84.320	ENSCAFG00020021230	LIG4	100	83.864	Canis_lupus_dingo
ENSMODG00000025064	LIG4	100	82.018	ENSCHIG00000001019	LIG4	100	81.559	Capra_hircus
ENSMODG00000025064	LIG4	99	81.506	ENSCAPG00000006284	LIG4	99	81.506	Cavia_aperea
ENSMODG00000025064	LIG4	100	81.229	ENSCPOG00000014266	LIG4	100	81.229	Cavia_porcellus
ENSMODG00000025064	LIG4	100	82.766	ENSCCAG00000019971	LIG4	100	82.766	Cebus_capucinus
ENSMODG00000025064	LIG4	100	84.101	ENSCATG00000021075	LIG4	100	83.644	Cercocebus_atys
ENSMODG00000025064	LIG4	100	82.237	ENSCLAG00000003376	LIG4	100	81.888	Chinchilla_lanigera
ENSMODG00000025064	LIG4	100	83.882	ENSCSAG00000000211	LIG4	100	83.425	Chlorocebus_sabaeus
ENSMODG00000025064	LIG4	99	79.824	ENSCPBG00000023291	LIG4	99	79.167	Chrysemys_picta_bellii
ENSMODG00000025064	LIG4	69	44.724	ENSCING00000009536	-	93	45.440	Ciona_intestinalis
ENSMODG00000025064	LIG4	83	45.072	ENSCSAVG00000010336	-	98	44.941	Ciona_savignyi
ENSMODG00000025064	LIG4	100	83.553	ENSCANG00000005805	LIG4	100	83.095	Colobus_angolensis_palliatus
ENSMODG00000025064	LIG4	100	80.832	ENSCGRG00001012072	Lig4	100	80.482	Cricetulus_griseus_chok1gshd
ENSMODG00000025064	LIG4	100	80.832	ENSCGRG00000013417	Lig4	100	80.482	Cricetulus_griseus_crigri
ENSMODG00000025064	LIG4	97	65.878	ENSCSEG00000013905	lig4	96	65.878	Cynoglossus_semilaevis
ENSMODG00000025064	LIG4	99	66.191	ENSCVAG00000007896	lig4	99	65.604	Cyprinodon_variegatus
ENSMODG00000025064	LIG4	99	63.776	ENSDARG00000060620	lig4	99	63.516	Danio_rerio
ENSMODG00000025064	LIG4	100	84.320	ENSDNOG00000000513	LIG4	100	84.320	Dasypus_novemcinctus
ENSMODG00000025064	LIG4	100	81.559	ENSDORG00000027303	Lig4	100	81.559	Dipodomys_ordii
ENSMODG00000025064	LIG4	89	31.308	FBgn0030506	Lig4	91	31.030	Drosophila_melanogaster
ENSMODG00000025064	LIG4	99	81.285	ENSETEG00000015563	LIG4	100	81.506	Echinops_telfairi
ENSMODG00000025064	LIG4	99	43.054	ENSEBUG00000014243	lig4	98	43.054	Eptatretus_burgeri
ENSMODG00000025064	LIG4	100	84.211	ENSEASG00005022073	LIG4	100	83.644	Equus_asinus_asinus
ENSMODG00000025064	LIG4	100	83.882	ENSECAG00000003257	LIG4	100	83.315	Equus_caballus
ENSMODG00000025064	LIG4	99	66.740	ENSELUG00000006787	lig4	99	66.519	Esox_lucius
ENSMODG00000025064	LIG4	100	82.785	ENSFCAG00000031985	LIG4	100	82.327	Felis_catus
ENSMODG00000025064	LIG4	88	77.447	ENSFALG00000004214	LIG4	98	77.047	Ficedula_albicollis
ENSMODG00000025064	LIG4	100	81.998	ENSFDAG00000008973	LIG4	100	81.998	Fukomys_damarensis
ENSMODG00000025064	LIG4	99	65.423	ENSFHEG00000007398	lig4	90	65.203	Fundulus_heteroclitus
ENSMODG00000025064	LIG4	85	63.718	ENSGMOG00000012843	lig4	99	64.000	Gadus_morhua
ENSMODG00000025064	LIG4	99	76.425	ENSGALG00000016854	LIG4	99	76.180	Gallus_gallus
ENSMODG00000025064	LIG4	99	65.740	ENSGAFG00000019779	lig4	95	65.862	Gambusia_affinis
ENSMODG00000025064	LIG4	99	63.886	ENSGACG00000014135	lig4	99	63.776	Gasterosteus_aculeatus
ENSMODG00000025064	LIG4	100	84.539	ENSGGOG00000027771	LIG4	100	84.083	Gorilla_gorilla
ENSMODG00000025064	LIG4	99	66.703	ENSHBUG00000006245	lig4	99	66.703	Haplochromis_burtoni
ENSMODG00000025064	LIG4	100	81.888	ENSHGLG00000000718	LIG4	100	81.888	Heterocephalus_glaber_female
ENSMODG00000025064	LIG4	100	81.888	ENSHGLG00100003265	LIG4	100	81.888	Heterocephalus_glaber_male
ENSMODG00000025064	LIG4	99	64.286	ENSHCOG00000012010	lig4	99	64.176	Hippocampus_comes
ENSMODG00000025064	LIG4	99	66.261	ENSIPUG00000013748	lig4	98	66.113	Ictalurus_punctatus
ENSMODG00000025064	LIG4	100	82.346	ENSSTOG00000024303	LIG4	100	81.998	Ictidomys_tridecemlineatus
ENSMODG00000025064	LIG4	100	80.132	ENSJJAG00000006750	Lig4	100	80.132	Jaculus_jaculus
ENSMODG00000025064	LIG4	99	65.376	ENSKMAG00000001149	lig4	99	65.376	Kryptolebias_marmoratus
ENSMODG00000025064	LIG4	91	65.666	ENSLBEG00000014578	lig4	100	65.786	Labrus_bergylta
ENSMODG00000025064	LIG4	99	73.047	ENSLACG00000003282	LIG4	99	72.687	Latimeria_chalumnae
ENSMODG00000025064	LIG4	99	70.208	ENSLOCG00000008901	lig4	98	69.956	Lepisosteus_oculatus
ENSMODG00000025064	LIG4	100	82.694	ENSLAFG00000031152	LIG4	100	82.694	Loxodonta_africana
ENSMODG00000025064	LIG4	100	84.101	ENSMFAG00000037235	LIG4	100	83.644	Macaca_fascicularis
ENSMODG00000025064	LIG4	100	83.882	ENSMMUG00000008874	LIG4	100	83.425	Macaca_mulatta
ENSMODG00000025064	LIG4	100	84.101	ENSMNEG00000023575	LIG4	100	83.644	Macaca_nemestrina
ENSMODG00000025064	LIG4	100	83.991	ENSMLEG00000026720	LIG4	100	83.535	Mandrillus_leucophaeus
ENSMODG00000025064	LIG4	99	66.301	ENSMAMG00000008472	lig4	99	66.411	Mastacembelus_armatus
ENSMODG00000025064	LIG4	99	66.813	ENSMZEG00005001855	lig4	99	66.813	Maylandia_zebra
ENSMODG00000025064	LIG4	99	77.067	ENSMGAG00000015532	LIG4	99	76.821	Meleagris_gallopavo
ENSMODG00000025064	LIG4	100	78.838	ENSMOCG00000019000	Lig4	100	78.485	Microtus_ochrogaster
ENSMODG00000025064	LIG4	99	64.615	ENSMMOG00000004390	lig4	99	64.615	Mola_mola
ENSMODG00000025064	LIG4	99	65.639	ENSMALG00000008555	lig4	99	65.639	Monopterus_albus
ENSMODG00000025064	LIG4	100	81.031	MGP_CAROLIEiJ_G0030809	Lig4	100	80.571	Mus_caroli
ENSMODG00000025064	LIG4	100	80.921	ENSMUSG00000049717	Lig4	100	80.461	Mus_musculus
ENSMODG00000025064	LIG4	100	81.360	MGP_PahariEiJ_G0021270	Lig4	100	80.900	Mus_pahari
ENSMODG00000025064	LIG4	100	81.031	MGP_SPRETEiJ_G0031917	Lig4	100	80.571	Mus_spretus
ENSMODG00000025064	LIG4	100	82.456	ENSMPUG00000018675	LIG4	100	81.998	Mustela_putorius_furo
ENSMODG00000025064	LIG4	100	83.443	ENSMLUG00000001267	LIG4	100	82.876	Myotis_lucifugus
ENSMODG00000025064	LIG4	100	80.900	ENSNGAG00000013258	Lig4	100	80.900	Nannospalax_galili
ENSMODG00000025064	LIG4	99	66.813	ENSNBRG00000021252	lig4	99	66.813	Neolamprologus_brichardi
ENSMODG00000025064	LIG4	100	84.211	ENSNLEG00000007888	LIG4	100	83.754	Nomascus_leucogenys
ENSMODG00000025064	LIG4	100	81.250	ENSOPRG00000005765	LIG4	100	80.790	Ochotona_princeps
ENSMODG00000025064	LIG4	100	80.022	ENSODEG00000019683	LIG4	100	80.022	Octodon_degus
ENSMODG00000025064	LIG4	99	66.593	ENSONIG00000011969	lig4	98	66.703	Oreochromis_niloticus
ENSMODG00000025064	LIG4	100	83.425	ENSOCUG00000015734	LIG4	100	83.425	Oryctolagus_cuniculus
ENSMODG00000025064	LIG4	99	65.011	ENSORLG00000004041	lig4	99	65.011	Oryzias_latipes
ENSMODG00000025064	LIG4	99	65.011	ENSORLG00020019607	lig4	99	65.011	Oryzias_latipes_hni
ENSMODG00000025064	LIG4	99	65.121	ENSORLG00015017754	lig4	99	65.121	Oryzias_latipes_hsok
ENSMODG00000025064	LIG4	74	69.379	ENSOMEG00000003459	lig4	98	68.741	Oryzias_melastigma
ENSMODG00000025064	LIG4	100	83.461	ENSOGAG00000032120	LIG4	99	83.004	Otolemur_garnettii
ENSMODG00000025064	LIG4	82	83.780	ENSOARG00000005590	LIG4	98	83.221	Ovis_aries
ENSMODG00000025064	LIG4	100	84.649	ENSPPAG00000032998	LIG4	100	84.193	Pan_paniscus
ENSMODG00000025064	LIG4	100	83.224	ENSPPRG00000017804	LIG4	100	82.766	Panthera_pardus
ENSMODG00000025064	LIG4	100	83.114	ENSPTIG00000010051	LIG4	100	82.656	Panthera_tigris_altaica
ENSMODG00000025064	LIG4	100	84.539	ENSPTRG00000006025	LIG4	100	84.083	Pan_troglodytes
ENSMODG00000025064	LIG4	100	84.211	ENSPANG00000007562	LIG4	100	83.754	Papio_anubis
ENSMODG00000025064	LIG4	99	66.374	ENSPKIG00000011645	lig4	98	66.007	Paramormyrops_kingsleyae
ENSMODG00000025064	LIG4	99	79.144	ENSPSIG00000001504	LIG4	99	78.791	Pelodiscus_sinensis
ENSMODG00000025064	LIG4	99	63.596	ENSPMGG00000013486	lig4	99	63.596	Periophthalmus_magnuspinnatus
ENSMODG00000025064	LIG4	100	80.394	ENSPEMG00000000076	Lig4	100	80.044	Peromyscus_maniculatus_bairdii
ENSMODG00000025064	LIG4	100	92.426	ENSPCIG00000021882	LIG4	100	92.426	Phascolarctos_cinereus
ENSMODG00000025064	LIG4	99	66.000	ENSPFOG00000000797	lig4	99	65.752	Poecilia_formosa
ENSMODG00000025064	LIG4	99	65.889	ENSPLAG00000001196	lig4	99	65.642	Poecilia_latipinna
ENSMODG00000025064	LIG4	99	66.000	ENSPMEG00000021353	lig4	99	65.752	Poecilia_mexicana
ENSMODG00000025064	LIG4	99	65.889	ENSPREG00000007323	lig4	99	65.642	Poecilia_reticulata
ENSMODG00000025064	LIG4	100	84.101	ENSPPYG00000005540	LIG4	100	83.644	Pongo_abelii
ENSMODG00000025064	LIG4	100	82.895	ENSPVAG00000016403	LIG4	100	82.437	Pteropus_vampyrus
ENSMODG00000025064	LIG4	99	66.813	ENSPNYG00000009660	lig4	99	66.813	Pundamilia_nyererei
ENSMODG00000025064	LIG4	100	64.880	ENSPNAG00000028056	lig4	100	64.513	Pygocentrus_nattereri
ENSMODG00000025064	LIG4	100	64.880	ENSPNAG00000028069	LIG4	100	64.513	Pygocentrus_nattereri
ENSMODG00000025064	LIG4	100	80.592	ENSRNOG00000014605	Lig4	100	80.132	Rattus_norvegicus
ENSMODG00000025064	LIG4	100	82.785	ENSRBIG00000039962	LIG4	100	82.327	Rhinopithecus_bieti
ENSMODG00000025064	LIG4	100	83.882	ENSRROG00000006040	LIG4	100	83.425	Rhinopithecus_roxellana
ENSMODG00000025064	LIG4	100	82.656	ENSSBOG00000019029	LIG4	100	82.656	Saimiri_boliviensis_boliviensis
ENSMODG00000025064	LIG4	100	89.243	ENSSHAG00000009525	LIG4	100	89.243	Sarcophilus_harrisii
ENSMODG00000025064	LIG4	99	65.601	ENSSFOG00015012835	lig4	99	65.232	Scleropages_formosus
ENSMODG00000025064	LIG4	99	64.159	ENSSMAG00000011267	lig4	99	64.159	Scophthalmus_maximus
ENSMODG00000025064	LIG4	99	66.888	ENSSDUG00000010343	lig4	98	66.519	Seriola_dumerili
ENSMODG00000025064	LIG4	99	65.265	ENSSLDG00000003239	lig4	99	65.044	Seriola_lalandi_dorsalis
ENSMODG00000025064	LIG4	100	78.337	ENSSARG00000006573	LIG4	100	77.899	Sorex_araneus
ENSMODG00000025064	LIG4	93	76.777	ENSSPUG00000002444	LIG4	100	76.777	Sphenodon_punctatus
ENSMODG00000025064	LIG4	99	66.228	ENSSPAG00000001609	lig4	99	66.228	Stegastes_partitus
ENSMODG00000025064	LIG4	100	83.004	ENSSSCG00000009540	LIG4	100	83.004	Sus_scrofa
ENSMODG00000025064	LIG4	99	76.406	ENSTGUG00000010795	LIG4	99	76.049	Taeniopygia_guttata
ENSMODG00000025064	LIG4	99	64.693	ENSTRUG00000009984	lig4	99	64.544	Takifugu_rubripes
ENSMODG00000025064	LIG4	99	65.044	ENSTNIG00000010348	lig4	99	65.265	Tetraodon_nigroviridis
ENSMODG00000025064	LIG4	100	83.425	ENSTBEG00000017741	LIG4	100	83.425	Tupaia_belangeri
ENSMODG00000025064	LIG4	100	82.566	ENSTTRG00000012660	LIG4	100	82.108	Tursiops_truncatus
ENSMODG00000025064	LIG4	100	82.127	ENSUAMG00000003773	LIG4	100	81.668	Ursus_americanus
ENSMODG00000025064	LIG4	99	72.338	ENSXETG00000002654	lig4	99	72.088	Xenopus_tropicalis
ENSMODG00000025064	LIG4	99	65.778	ENSXCOG00000017401	lig4	99	65.532	Xiphophorus_couchianus
ENSMODG00000025064	LIG4	99	65.927	ENSXMAG00000015142	lig4	99	65.680	Xiphophorus_maculatus