EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMODG00000028916 (Gene tree)
Gene ID: 100025408
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Monodelphis_domestica
Status: putative
Strand: Minus strand
Length: 13069 bases
Position: chr4:405348257-405361325
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMODP00000039084	zf-C2H2	PF00096.26	3.7e-64	1	11
ENSMODP00000039084	zf-C2H2	PF00096.26	3.7e-64	2	11
ENSMODP00000039084	zf-C2H2	PF00096.26	3.7e-64	3	11
ENSMODP00000039084	zf-C2H2	PF00096.26	3.7e-64	4	11
ENSMODP00000039084	zf-C2H2	PF00096.26	3.7e-64	5	11
ENSMODP00000039084	zf-C2H2	PF00096.26	3.7e-64	6	11
ENSMODP00000039084	zf-C2H2	PF00096.26	3.7e-64	7	11
ENSMODP00000039084	zf-C2H2	PF00096.26	3.7e-64	8	11
ENSMODP00000039084	zf-C2H2	PF00096.26	3.7e-64	9	11
ENSMODP00000039084	zf-C2H2	PF00096.26	3.7e-64	10	11
ENSMODP00000039084	zf-C2H2	PF00096.26	3.7e-64	11	11
ENSMODP00000039084	zf-met	PF12874.7	1e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMODT00000042194	-	5669	-	ENSMODP00000039084	606 (aa)	-	K7DZY3

Gene Model

Click here to download ENSMODG00000028916's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMODG00000028916's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMODG00000028916	-	88	44.944	ENSMODG00000001880	-	99	44.944
ENSMODG00000028916	-	73	47.482	ENSMODG00000027841	ZNF768	63	46.586
ENSMODG00000028916	-	68	53.419	ENSMODG00000008516	-	100	53.985
ENSMODG00000028916	-	67	37.669	ENSMODG00000006238	GZF1	100	40.217
ENSMODG00000028916	-	88	43.132	ENSMODG00000010532	-	99	43.557
ENSMODG00000028916	-	89	49.871	ENSMODG00000023146	-	99	49.871
ENSMODG00000028916	-	89	43.860	ENSMODG00000024585	-	95	43.860
ENSMODG00000028916	-	66	44.875	ENSMODG00000018622	-	98	44.875

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMODG00000028916	-	65	50.000	ENSAMXG00000029783	-	84	50.000	Astyanax_mexicanus
ENSMODG00000028916	-	65	47.934	ENSAMXG00000034096	-	88	47.934	Astyanax_mexicanus
ENSMODG00000028916	-	64	47.879	ENSAMXG00000000353	-	96	47.879	Astyanax_mexicanus
ENSMODG00000028916	-	66	49.660	ENSAMXG00000044028	-	95	49.660	Astyanax_mexicanus
ENSMODG00000028916	-	64	46.890	ENSAMXG00000043019	-	91	46.890	Astyanax_mexicanus
ENSMODG00000028916	-	71	47.176	ENSBTAG00000014593	-	85	47.176	Bos_taurus
ENSMODG00000028916	-	66	51.449	ENSBTAG00000040358	-	100	51.449	Bos_taurus
ENSMODG00000028916	-	66	50.000	ENSCSAG00000000471	-	97	50.000	Chlorocebus_sabaeus
ENSMODG00000028916	-	70	44.860	ENSCPBG00000009609	-	87	44.214	Chrysemys_picta_bellii
ENSMODG00000028916	-	90	50.676	ENSCPBG00000002430	-	98	50.676	Chrysemys_picta_bellii
ENSMODG00000028916	-	91	44.565	ENSDNOG00000047529	-	99	34.940	Dasypus_novemcinctus
ENSMODG00000028916	-	88	43.662	ENSDNOG00000042588	-	100	43.662	Dasypus_novemcinctus
ENSMODG00000028916	-	64	46.372	ENSEBUG00000016164	-	80	45.676	Eptatretus_burgeri
ENSMODG00000028916	-	72	49.200	ENSEBUG00000013221	-	88	49.200	Eptatretus_burgeri
ENSMODG00000028916	-	61	41.667	ENSEBUG00000016969	-	77	40.836	Eptatretus_burgeri
ENSMODG00000028916	-	67	44.215	ENSELUG00000019008	-	88	40.860	Esox_lucius
ENSMODG00000028916	-	66	50.554	ENSFCAG00000043966	-	99	50.554	Felis_catus
ENSMODG00000028916	-	64	48.679	ENSGAFG00000021131	-	81	46.203	Gambusia_affinis
ENSMODG00000028916	-	62	45.620	ENSGAFG00000013048	-	81	45.620	Gambusia_affinis
ENSMODG00000028916	-	66	50.294	ENSGGOG00000042802	-	97	50.294	Gorilla_gorilla
ENSMODG00000028916	-	70	52.601	ENSHCOG00000019512	-	92	52.601	Hippocampus_comes
ENSMODG00000028916	-	80	44.872	ENSHCOG00000014713	-	97	51.903	Hippocampus_comes
ENSMODG00000028916	-	66	50.588	ENSMFAG00000008648	-	97	50.588	Macaca_fascicularis
ENSMODG00000028916	-	66	50.588	ENSMNEG00000001556	-	97	50.588	Macaca_nemestrina
ENSMODG00000028916	-	66	50.588	ENSMLEG00000007035	-	97	50.588	Mandrillus_leucophaeus
ENSMODG00000028916	-	88	42.560	ENSMAUG00000015263	-	97	42.560	Mesocricetus_auratus
ENSMODG00000028916	-	89	42.604	ENSMOCG00000003394	-	95	42.604	Microtus_ochrogaster
ENSMODG00000028916	-	89	49.751	ENSMPUG00000006562	-	92	49.751	Mustela_putorius_furo
ENSMODG00000028916	-	65	46.154	ENSNBRG00000010194	-	68	46.231	Neolamprologus_brichardi
ENSMODG00000028916	-	66	50.294	ENSNLEG00000018988	-	97	50.294	Nomascus_leucogenys
ENSMODG00000028916	-	70	53.690	ENSMEUG00000006978	-	89	53.690	Notamacropus_eugenii
ENSMODG00000028916	-	88	44.505	ENSMEUG00000012153	-	96	44.505	Notamacropus_eugenii
ENSMODG00000028916	-	91	36.292	ENSOGAG00000024538	-	99	35.797	Otolemur_garnettii
ENSMODG00000028916	-	66	50.588	ENSPPAG00000014496	-	97	50.588	Pan_paniscus
ENSMODG00000028916	-	66	50.588	ENSPANG00000030207	-	97	50.588	Papio_anubis
ENSMODG00000028916	-	64	55.396	ENSPSIG00000010405	-	99	55.396	Pelodiscus_sinensis
ENSMODG00000028916	-	66	45.230	ENSPSIG00000009650	-	71	45.230	Pelodiscus_sinensis
ENSMODG00000028916	-	88	44.298	ENSPSIG00000002565	-	78	44.298	Pelodiscus_sinensis
ENSMODG00000028916	-	81	41.975	ENSPEMG00000010242	-	79	41.975	Peromyscus_maniculatus_bairdii
ENSMODG00000028916	-	70	41.573	ENSPLAG00000010389	-	76	41.844	Poecilia_latipinna
ENSMODG00000028916	-	72	44.675	ENSPLAG00000021062	-	96	43.979	Poecilia_latipinna
ENSMODG00000028916	-	64	43.189	ENSPLAG00000020710	-	74	43.189	Poecilia_latipinna
ENSMODG00000028916	-	89	49.254	ENSPCAG00000009106	-	93	49.254	Procavia_capensis
ENSMODG00000028916	-	61	44.737	ENSPNYG00000024243	-	93	44.737	Pundamilia_nyererei
ENSMODG00000028916	-	66	46.921	ENSPNAG00000018644	-	92	46.921	Pygocentrus_nattereri
ENSMODG00000028916	-	88	38.692	ENSSHAG00000001415	-	97	38.692	Sarcophilus_harrisii
ENSMODG00000028916	-	66	44.476	ENSSDUG00000009534	-	68	44.476	Seriola_dumerili
ENSMODG00000028916	-	62	47.465	ENSSLDG00000013760	-	98	43.098	Seriola_lalandi_dorsalis
ENSMODG00000028916	-	60	50.000	ENSSPUG00000007147	-	98	50.000	Sphenodon_punctatus
ENSMODG00000028916	-	70	44.509	ENSTRUG00000006896	-	93	44.509	Takifugu_rubripes
ENSMODG00000028916	-	65	46.216	ENSVPAG00000011867	-	89	46.216	Vicugna_pacos
ENSMODG00000028916	-	70	44.815	ENSXCOG00000009794	-	90	44.815	Xiphophorus_couchianus