EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMODG00000029407 (Gene tree)
Gene ID: -
Gene Symbol: SF1
Alias: ZCCHC25|ZFM1|ZNF162
Full Name: splicing factor 1
Gene Type: protein_coding
Species: Monodelphis_domestica
Status: putative
Strand: Plus strand
Length: 10813 bases
Position: chrUn:53795550-53806362
Accession: 12950
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMODP00000038839	KH_1	PF00013.29	1.3e-07	1	1
ENSMODP00000038839	zf-CCHC	PF00098.23	0.0001	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMODT00000041946	SF1-201	1550	-	ENSMODP00000038839	460 (aa)	-	K7DZ88

Gene Model

Click here to download ENSMODG00000029407's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMODG00000029407's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMODG00000029407	SF1	80	81.530	ENSAPOG00000012341	sf1	59	77.566	Acanthochromis_polyacanthus
ENSMODG00000029407	SF1	97	94.631	ENSAMEG00000017828	SF1	70	94.631	Ailuropoda_melanoleuca
ENSMODG00000029407	SF1	79	83.924	ENSACIG00000016514	sf1	61	77.512	Amphilophus_citrinellus
ENSMODG00000029407	SF1	80	81.794	ENSAOCG00000010934	sf1	59	77.327	Amphiprion_ocellaris
ENSMODG00000029407	SF1	80	81.794	ENSAPEG00000009498	sf1	59	77.327	Amphiprion_percula
ENSMODG00000029407	SF1	80	81.842	ENSATEG00000001894	sf1	60	77.857	Anabas_testudineus
ENSMODG00000029407	SF1	97	94.183	ENSANAG00000026664	-	94	98.241	Aotus_nancymaae
ENSMODG00000029407	SF1	89	87.745	ENSANAG00000022607	-	88	87.671	Aotus_nancymaae
ENSMODG00000029407	SF1	80	84.824	ENSACLG00000007633	sf1	61	78.469	Astatotilapia_calliptera
ENSMODG00000029407	SF1	83	85.604	ENSAMXG00000003630	sf1	53	79.567	Astyanax_mexicanus
ENSMODG00000029407	SF1	97	94.407	ENSBTAG00000001035	SF1	74	94.407	Bos_taurus
ENSMODG00000029407	SF1	97	94.407	ENSCJAG00000002780	SF1	70	94.407	Callithrix_jacchus
ENSMODG00000029407	SF1	97	94.407	ENSCAFG00000014239	SF1	70	94.407	Canis_familiaris
ENSMODG00000029407	SF1	97	94.407	ENSCAFG00020014381	SF1	70	94.407	Canis_lupus_dingo
ENSMODG00000029407	SF1	97	94.407	ENSCHIG00000025867	SF1	82	94.407	Capra_hircus
ENSMODG00000029407	SF1	66	99.283	ENSTSYG00000033618	SF1	88	100.000	Carlito_syrichta
ENSMODG00000029407	SF1	92	97.882	ENSCAPG00000010762	SF1	76	97.882	Cavia_aperea
ENSMODG00000029407	SF1	93	97.892	ENSCPOG00000012290	SF1	83	94.382	Cavia_porcellus
ENSMODG00000029407	SF1	89	85.575	ENSCCAG00000023781	-	82	85.676	Cebus_capucinus
ENSMODG00000029407	SF1	97	94.407	ENSCCAG00000037881	SF1	94	98.492	Cebus_capucinus
ENSMODG00000029407	SF1	97	94.407	ENSCATG00000011564	SF1	89	98.391	Cercocebus_atys
ENSMODG00000029407	SF1	97	94.407	ENSCSAG00000007258	SF1	82	94.407	Chlorocebus_sabaeus
ENSMODG00000029407	SF1	85	92.051	ENSCHOG00000006008	SF1	74	92.051	Choloepus_hoffmanni
ENSMODG00000029407	SF1	92	89.858	ENSCPBG00000023763	SF1	52	90.465	Chrysemys_picta_bellii
ENSMODG00000029407	SF1	67	67.093	ENSCING00000005564	-	72	61.667	Ciona_intestinalis
ENSMODG00000029407	SF1	90	58.810	ENSCSAVG00000009055	-	85	56.180	Ciona_savignyi
ENSMODG00000029407	SF1	97	94.407	ENSCANG00000042201	SF1	89	98.391	Colobus_angolensis_palliatus
ENSMODG00000029407	SF1	97	94.183	ENSCGRG00001003677	Sf1	75	97.658	Cricetulus_griseus_chok1gshd
ENSMODG00000029407	SF1	96	94.157	ENSCGRG00000001708	Sf1	82	94.157	Cricetulus_griseus_crigri
ENSMODG00000029407	SF1	86	78.571	ENSCSEG00000014375	sf1	57	76.850	Cynoglossus_semilaevis
ENSMODG00000029407	SF1	81	84.367	ENSCVAG00000001670	sf1	64	78.832	Cyprinodon_variegatus
ENSMODG00000029407	SF1	84	81.472	ENSDARG00000008188	sf1	70	78.860	Danio_rerio
ENSMODG00000029407	SF1	97	94.631	ENSDNOG00000001282	SF1	82	94.631	Dasypus_novemcinctus
ENSMODG00000029407	SF1	97	94.407	ENSDORG00000016334	Sf1	70	94.407	Dipodomys_ordii
ENSMODG00000029407	SF1	88	88.943	ENSETEG00000012830	SF1	57	87.500	Echinops_telfairi
ENSMODG00000029407	SF1	97	93.960	ENSEASG00005018272	SF1	82	93.960	Equus_asinus_asinus
ENSMODG00000029407	SF1	97	94.183	ENSECAG00000024544	SF1	82	94.183	Equus_caballus
ENSMODG00000029407	SF1	83	97.644	ENSEEUG00000001058	SF1	97	97.644	Erinaceus_europaeus
ENSMODG00000029407	SF1	80	81.698	ENSELUG00000013225	sf1	54	78.230	Esox_lucius
ENSMODG00000029407	SF1	97	94.407	ENSFCAG00000012231	SF1	70	94.407	Felis_catus
ENSMODG00000029407	SF1	92	97.882	ENSFDAG00000009833	SF1	76	97.882	Fukomys_damarensis
ENSMODG00000029407	SF1	80	81.794	ENSFHEG00000022656	sf1	60	77.778	Fundulus_heteroclitus
ENSMODG00000029407	SF1	70	87.613	ENSGMOG00000007469	sf1	60	87.613	Gadus_morhua
ENSMODG00000029407	SF1	80	84.450	ENSGAFG00000019284	sf1	76	79.462	Gambusia_affinis
ENSMODG00000029407	SF1	82	80.362	ENSGACG00000000826	sf1	66	75.728	Gasterosteus_aculeatus
ENSMODG00000029407	SF1	92	89.623	ENSGAGG00000021691	SF1	57	90.220	Gopherus_agassizii
ENSMODG00000029407	SF1	80	82.895	ENSHBUG00000011598	sf1	59	76.690	Haplochromis_burtoni
ENSMODG00000029407	SF1	97	94.407	ENSHGLG00000009541	SF1	75	97.892	Heterocephalus_glaber_female
ENSMODG00000029407	SF1	92	97.882	ENSHGLG00100013879	-	76	97.882	Heterocephalus_glaber_male
ENSMODG00000029407	SF1	83	87.760	ENSHGLG00100008076	-	76	85.156	Heterocephalus_glaber_male
ENSMODG00000029407	SF1	89	85.446	ENSHGLG00100008255	-	84	84.977	Heterocephalus_glaber_male
ENSMODG00000029407	SF1	84	79.597	ENSHCOG00000011388	sf1	62	75.281	Hippocampus_comes
ENSMODG00000029407	SF1	96	94.382	ENSSTOG00000009790	-	71	94.382	Ictidomys_tridecemlineatus
ENSMODG00000029407	SF1	81	88.204	ENSSTOG00000024353	-	72	85.330	Ictidomys_tridecemlineatus
ENSMODG00000029407	SF1	97	94.631	ENSJJAG00000011788	Sf1	70	94.631	Jaculus_jaculus
ENSMODG00000029407	SF1	81	83.551	ENSKMAG00000005854	sf1	62	78.282	Kryptolebias_marmoratus
ENSMODG00000029407	SF1	81	82.199	ENSLBEG00000019836	sf1	64	78.043	Labrus_bergylta
ENSMODG00000029407	SF1	89	79.567	ENSLACG00000018493	SF1	74	79.087	Latimeria_chalumnae
ENSMODG00000029407	SF1	81	84.615	ENSLOCG00000002130	sf1	63	81.446	Lepisosteus_oculatus
ENSMODG00000029407	SF1	97	94.407	ENSLAFG00000007201	SF1	72	93.622	Loxodonta_africana
ENSMODG00000029407	SF1	97	94.407	ENSMFAG00000033122	SF1	89	98.391	Macaca_fascicularis
ENSMODG00000029407	SF1	97	94.407	ENSMMUG00000022606	SF1	99	98.034	Macaca_mulatta
ENSMODG00000029407	SF1	97	94.407	ENSMNEG00000037901	SF1	89	98.391	Macaca_nemestrina
ENSMODG00000029407	SF1	96	94.395	ENSMLEG00000040706	SF1	90	98.118	Mandrillus_leucophaeus
ENSMODG00000029407	SF1	80	82.850	ENSMAMG00000001780	sf1	59	76.690	Mastacembelus_armatus
ENSMODG00000029407	SF1	80	83.158	ENSMZEG00005009196	sf1	59	76.923	Maylandia_zebra
ENSMODG00000029407	SF1	97	94.183	ENSMAUG00000014064	Sf1	75	97.658	Mesocricetus_auratus
ENSMODG00000029407	SF1	97	94.407	ENSMICG00000001202	SF1	94	98.246	Microcebus_murinus
ENSMODG00000029407	SF1	97	93.960	ENSMOCG00000022038	Sf1	75	97.424	Microtus_ochrogaster
ENSMODG00000029407	SF1	80	81.989	ENSMMOG00000020474	sf1	60	76.942	Mola_mola
ENSMODG00000029407	SF1	80	83.243	ENSMALG00000020521	sf1	68	78.537	Monopterus_albus
ENSMODG00000029407	SF1	97	94.183	MGP_CAROLIEiJ_G0022607	Sf1	100	99.625	Mus_caroli
ENSMODG00000029407	SF1	97	94.183	ENSMUSG00000024949	Sf1	100	99.625	Mus_musculus
ENSMODG00000029407	SF1	97	94.183	MGP_PahariEiJ_G0014101	Sf1	100	99.625	Mus_pahari
ENSMODG00000029407	SF1	97	94.183	MGP_SPRETEiJ_G0023518	Sf1	100	99.625	Mus_spretus
ENSMODG00000029407	SF1	97	94.407	ENSMPUG00000012684	SF1	70	94.407	Mustela_putorius_furo
ENSMODG00000029407	SF1	97	94.407	ENSMLUG00000015217	-	70	94.407	Myotis_lucifugus
ENSMODG00000029407	SF1	93	93.208	ENSMLUG00000029800	-	71	94.634	Myotis_lucifugus
ENSMODG00000029407	SF1	97	94.631	ENSNGAG00000005550	Sf1	75	98.126	Nannospalax_galili
ENSMODG00000029407	SF1	80	84.824	ENSNBRG00000017606	sf1	60	78.230	Neolamprologus_brichardi
ENSMODG00000029407	SF1	97	94.407	ENSNLEG00000005236	-	89	98.391	Nomascus_leucogenys
ENSMODG00000029407	SF1	95	95.216	ENSMEUG00000013424	SF1	83	95.216	Notamacropus_eugenii
ENSMODG00000029407	SF1	87	93.781	ENSOPRG00000005008	SF1	81	93.781	Ochotona_princeps
ENSMODG00000029407	SF1	97	91.946	ENSODEG00000006102	-	71	91.946	Octodon_degus
ENSMODG00000029407	SF1	80	82.632	ENSONIG00000015728	sf1	59	76.690	Oreochromis_niloticus
ENSMODG00000029407	SF1	74	86.880	ENSOANG00000002909	SF1	84	85.714	Ornithorhynchus_anatinus
ENSMODG00000029407	SF1	97	94.631	ENSOCUG00000026486	SF1	71	94.631	Oryctolagus_cuniculus
ENSMODG00000029407	SF1	83	80.818	ENSORLG00000011853	sf1	59	77.033	Oryzias_latipes
ENSMODG00000029407	SF1	83	80.818	ENSORLG00020011834	sf1	59	77.033	Oryzias_latipes_hni
ENSMODG00000029407	SF1	81	80.366	ENSORLG00015012855	sf1	59	76.794	Oryzias_latipes_hsok
ENSMODG00000029407	SF1	81	81.414	ENSOMEG00000005210	sf1	60	77.273	Oryzias_melastigma
ENSMODG00000029407	SF1	97	94.407	ENSOGAG00000016196	SF1	70	94.407	Otolemur_garnettii
ENSMODG00000029407	SF1	97	94.407	ENSOARG00000009166	SF1	78	94.407	Ovis_aries
ENSMODG00000029407	SF1	97	93.065	ENSPPAG00000002799	-	95	98.492	Pan_paniscus
ENSMODG00000029407	SF1	96	94.395	ENSPPRG00000013566	SF1	70	94.419	Panthera_pardus
ENSMODG00000029407	SF1	93	97.892	ENSPTIG00000016141	SF1	77	97.892	Panthera_tigris_altaica
ENSMODG00000029407	SF1	97	94.407	ENSPTRG00000003846	SF1	97	98.561	Pan_troglodytes
ENSMODG00000029407	SF1	97	94.407	ENSPANG00000020754	SF1	89	98.391	Papio_anubis
ENSMODG00000029407	SF1	73	78.824	ENSPKIG00000012116	sf1	88	74.286	Paramormyrops_kingsleyae
ENSMODG00000029407	SF1	69	87.500	ENSPSIG00000003610	SF1	60	86.885	Pelodiscus_sinensis
ENSMODG00000029407	SF1	97	94.183	ENSPEMG00000010463	Sf1	75	97.658	Peromyscus_maniculatus_bairdii
ENSMODG00000029407	SF1	73	72.107	ENSPMAG00000008272	sf1	53	66.938	Petromyzon_marinus
ENSMODG00000029407	SF1	97	95.302	ENSPCIG00000018173	SF1	69	98.829	Phascolarctos_cinereus
ENSMODG00000029407	SF1	80	85.676	ENSPFOG00000013683	sf1	66	80.779	Poecilia_formosa
ENSMODG00000029407	SF1	80	84.127	ENSPLAG00000018076	sf1	61	79.236	Poecilia_latipinna
ENSMODG00000029407	SF1	80	84.127	ENSPMEG00000005726	sf1	62	79.475	Poecilia_mexicana
ENSMODG00000029407	SF1	80	83.598	ENSPREG00000004155	sf1	59	78.759	Poecilia_reticulata
ENSMODG00000029407	SF1	97	94.407	ENSPPYG00000003098	-	84	94.407	Pongo_abelii
ENSMODG00000029407	SF1	96	94.170	ENSPCAG00000013631	SF1	66	94.170	Procavia_capensis
ENSMODG00000029407	SF1	97	94.407	ENSPCOG00000027546	SF1	94	98.246	Propithecus_coquereli
ENSMODG00000029407	SF1	96	94.619	ENSPVAG00000016938	SF1	67	94.619	Pteropus_vampyrus
ENSMODG00000029407	SF1	80	83.158	ENSPNYG00000004673	sf1	59	76.923	Pundamilia_nyererei
ENSMODG00000029407	SF1	81	85.714	ENSPNAG00000013072	sf1	59	79.376	Pygocentrus_nattereri
ENSMODG00000029407	SF1	97	94.183	ENSRNOG00000021085	Sf1	78	90.609	Rattus_norvegicus
ENSMODG00000029407	SF1	99	92.593	ENSRBIG00000042818	SF1	89	98.391	Rhinopithecus_bieti
ENSMODG00000029407	SF1	93	97.653	ENSRROG00000045655	SF1	92	98.015	Rhinopithecus_roxellana
ENSMODG00000029407	SF1	90	37.559	YLR116W	MSL5	92	35.778	Saccharomyces_cerevisiae
ENSMODG00000029407	SF1	89	81.463	ENSSBOG00000022267	-	97	80.590	Saimiri_boliviensis_boliviensis
ENSMODG00000029407	SF1	86	95.012	ENSSHAG00000006841	SF1	73	96.259	Sarcophilus_harrisii
ENSMODG00000029407	SF1	86	80.952	ENSSFOG00015021978	sf1	58	76.850	Scleropages_formosus
ENSMODG00000029407	SF1	89	76.581	ENSSMAG00000007549	sf1	63	77.049	Scophthalmus_maximus
ENSMODG00000029407	SF1	80	80.789	ENSSDUG00000003903	sf1	62	77.381	Seriola_dumerili
ENSMODG00000029407	SF1	80	80.789	ENSSLDG00000013075	sf1	60	77.381	Seriola_lalandi_dorsalis
ENSMODG00000029407	SF1	92	93.176	ENSSARG00000008180	SF1	82	93.176	Sorex_araneus
ENSMODG00000029407	SF1	89	85.981	ENSSPUG00000012907	SF1	68	86.441	Sphenodon_punctatus
ENSMODG00000029407	SF1	80	81.794	ENSSPAG00000019060	sf1	59	76.224	Stegastes_partitus
ENSMODG00000029407	SF1	97	94.407	ENSSSCG00000013021	SF1	82	94.407	Sus_scrofa
ENSMODG00000029407	SF1	84	71.285	ENSTNIG00000004820	sf1	78	68.974	Tetraodon_nigroviridis
ENSMODG00000029407	SF1	88	91.155	ENSTBEG00000013133	SF1	59	91.176	Tupaia_belangeri
ENSMODG00000029407	SF1	89	92.892	ENSTTRG00000008857	SF1	75	92.892	Tursiops_truncatus
ENSMODG00000029407	SF1	66	93.399	ENSUAMG00000011977	SF1	57	93.421	Ursus_americanus
ENSMODG00000029407	SF1	97	94.407	ENSUMAG00000007268	SF1	86	94.407	Ursus_maritimus
ENSMODG00000029407	SF1	75	99.598	ENSVPAG00000011912	SF1	65	99.598	Vicugna_pacos
ENSMODG00000029407	SF1	97	94.407	ENSVVUG00000028585	SF1	82	94.407	Vulpes_vulpes
ENSMODG00000029407	SF1	94	79.224	ENSXETG00000008434	sf1	68	80.723	Xenopus_tropicalis
ENSMODG00000029407	SF1	79	85.479	ENSXCOG00000003704	sf1	75	80.590	Xiphophorus_couchianus
ENSMODG00000029407	SF1	80	83.377	ENSXMAG00000007822	sf1	62	79.475	Xiphophorus_maculatus