EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSMODG00000029467 (Gene tree)
Gene ID: 103099360
Gene Symbol: -
Alias: -
Full Name: single-stranded DNA cytosine deaminase-like
Gene Type: protein_coding
Species: Monodelphis_domestica
Status: putative
Strand: Minus strand
Length: 17474 bases
Position: chr7:100255093-100272566
Accession: 103099360
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMODP00000040505	APOBEC_N	PF08210.11	5.8e-26	1	1
ENSMODP00000040505	APOBEC_C	PF05240.14	1.8e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMODT00000043611	-	1318	XM_007501374	ENSMODP00000040505	260 (aa)	XP_007501436	K7E403

Gene Model

Click here to download ENSMODG00000029467's gene model file

Pathways

Pathway ID	Pathway Name	Source
mdo05170	Human immunodeficiency virus 1 infection	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMODG00000029467's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMODG00000029467	-	65	46.471	ENSACAG00000024915	-	91	46.471	Anolis_carolinensis
ENSMODG00000029467	-	64	44.311	ENSLACG00000015876	-	92	44.311	Latimeria_chalumnae
ENSMODG00000029467	-	99	32.692	ENSLOCG00000003595	-	93	32.692	Lepisosteus_oculatus
ENSMODG00000029467	-	64	34.731	ENSPKIG00000010937	-	80	34.731	Paramormyrops_kingsleyae
ENSMODG00000029467	-	100	74.231	ENSPCIG00000027633	-	100	74.231	Phascolarctos_cinereus
ENSMODG00000029467	-	100	72.308	ENSSHAG00000005252	-	100	72.308	Sarcophilus_harrisii
ENSMODG00000029467	-	64	36.527	ENSSFOG00015006223	-	96	36.527	Scleropages_formosus