EuRBPDB

  • Home
  • Cancer
  • Family
  • Species
  • RBPredictor
  • Search
  • Download
  • Submit
  • Help
  • Contact

  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSMPUG00000000539 (Gene tree)
Gene ID
101692109
Gene Symbol
RBMS1
Alias
C2orf12|DKFZp564H0764|HCC-4|MSSP-1|MSSP-2|MSSP-3|SCR2|YC1
Full Name
RNA binding motif single stranded interacting protein 1
Gene Type
protein_coding
Species
Mustela_putorius_furo
Status
putative
Strand
Minus strand
Length
205860 bases
Position
chrGL896909.1:13827187-14033046
Accession
101692109
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSMPUP00000000533RRM_1PF00076.224.3e-3312
ENSMPUP00000000533RRM_1PF00076.224.3e-3322
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSMPUT00000000545RBMS1-2011442-ENSMPUP00000000533419 (aa)XP_004743986M3XN83
Gene Model
Click here to download ENSMPUG00000000539's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSMPUG00000000539's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSMPUG00000000539RBMS110067.253ENSMPUG00000011956RBMS310069.079
ENSMPUG00000000539RBMS15233.871ENSMPUG00000007192ELAVL46935.266
ENSMPUG00000000539RBMS19271.392ENSMPUG00000001490-8872.480
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSMPUG00000000539RBMS110094.076ENSG00000153250RBMS110099.213Homo_sapiens
ENSMPUG00000000539RBMS19062.500ENSAPOG00000013761rbms1a8963.056Acanthochromis_polyacanthus
ENSMPUG00000000539RBMS18774.255ENSAPOG00000024437-9469.129Acanthochromis_polyacanthus
ENSMPUG00000000539RBMS19593.500ENSAMEG00000012661RBMS110093.500Ailuropoda_melanoleuca
ENSMPUG00000000539RBMS18657.064ENSACIG00000000113rbms1a8957.341Amphilophus_citrinellus
ENSMPUG00000000539RBMS19673.086ENSACIG00000021498RBMS19773.086Amphilophus_citrinellus
ENSMPUG00000000539RBMS18663.158ENSAOCG00000010066rbms1a8963.333Amphiprion_ocellaris
ENSMPUG00000000539RBMS19475.000ENSAOCG00000014482-9575.000Amphiprion_ocellaris
ENSMPUG00000000539RBMS18663.158ENSAPEG00000023563rbms1a8963.333Amphiprion_percula
ENSMPUG00000000539RBMS19474.747ENSAPEG00000018371-9574.747Amphiprion_percula
ENSMPUG00000000539RBMS19062.766ENSATEG00000015450rbms1a8963.333Anabas_testudineus
ENSMPUG00000000539RBMS19571.144ENSATEG00000018573RBMS18973.641Anabas_testudineus
ENSMPUG00000000539RBMS19589.447ENSAPLG00000007282RBMS110089.538Anas_platyrhynchos
ENSMPUG00000000539RBMS19488.500ENSACAG00000011984RBMS17986.750Anolis_carolinensis
ENSMPUG00000000539RBMS18093.195ENSANAG00000024424RBMS110093.195Aotus_nancymaae
ENSMPUG00000000539RBMS19572.000ENSACLG00000013048RBMS19473.214Astatotilapia_calliptera
ENSMPUG00000000539RBMS18662.604ENSACLG00000021512rbms1a9062.778Astatotilapia_calliptera
ENSMPUG00000000539RBMS110070.991ENSAMXG00000009969RBMS110072.170Astyanax_mexicanus
ENSMPUG00000000539RBMS18770.652ENSAMXG00000002146rbms1a8870.652Astyanax_mexicanus
ENSMPUG00000000539RBMS110097.867ENSBTAG00000005180RBMS110097.867Bos_taurus
ENSMPUG00000000539RBMS19188.220ENSCJAG00000022465-9887.848Callithrix_jacchus
ENSMPUG00000000539RBMS19988.010ENSCJAG00000012871-9991.517Callithrix_jacchus
ENSMPUG00000000539RBMS110094.313ENSCJAG00000014861-10094.313Callithrix_jacchus
ENSMPUG00000000539RBMS110095.952ENSCAFG00000009922RBMS110095.952Canis_familiaris
ENSMPUG00000000539RBMS110099.284ENSCAFG00020006120RBMS110099.284Canis_lupus_dingo
ENSMPUG00000000539RBMS110098.568ENSCHIG00000023380RBMS110098.568Capra_hircus
ENSMPUG00000000539RBMS110094.313ENSTSYG00000005584RBMS110094.560Carlito_syrichta
ENSMPUG00000000539RBMS110094.988ENSCPOG00000012310RBMS110098.731Cavia_porcellus
ENSMPUG00000000539RBMS110094.313ENSCCAG00000033841RBMS110094.313Cebus_capucinus
ENSMPUG00000000539RBMS110094.313ENSCATG00000043032RBMS110098.705Cercocebus_atys
ENSMPUG00000000539RBMS110095.227ENSCLAG00000003031RBMS110098.705Chinchilla_lanigera
ENSMPUG00000000539RBMS110094.313ENSCSAG00000015687RBMS110094.313Chlorocebus_sabaeus
ENSMPUG00000000539RBMS15297.761ENSCHOG00000001579RBMS17397.761Choloepus_hoffmanni
ENSMPUG00000000539RBMS110090.047ENSCPBG00000026455RBMS110090.047Chrysemys_picta_bellii
ENSMPUG00000000539RBMS110094.313ENSCANG00000042152RBMS110094.560Colobus_angolensis_palliatus
ENSMPUG00000000539RBMS110094.511ENSCGRG00001022833Rbms110094.511Cricetulus_griseus_chok1gshd
ENSMPUG00000000539RBMS110098.329ENSCGRG00000008824Rbms110098.329Cricetulus_griseus_crigri
ENSMPUG00000000539RBMS19470.149ENSCSEG00000010652RBMS19668.159Cynoglossus_semilaevis
ENSMPUG00000000539RBMS19060.372ENSCSEG00000000889rbms1a9060.833Cynoglossus_semilaevis
ENSMPUG00000000539RBMS19062.500ENSCVAG00000014698rbms1a8962.778Cyprinodon_variegatus
ENSMPUG00000000539RBMS19371.173ENSCVAG00000002027RBMS19672.283Cyprinodon_variegatus
ENSMPUG00000000539RBMS18770.380ENSDARG00000074023rbms1a8770.380Danio_rerio
ENSMPUG00000000539RBMS19297.943ENSDNOG00000040691RBMS110097.943Dasypus_novemcinctus
ENSMPUG00000000539RBMS110094.988ENSDORG00000007103Rbms110098.964Dipodomys_ordii
ENSMPUG00000000539RBMS19482.872ENSETEG00000012135RBMS110082.872Echinops_telfairi
ENSMPUG00000000539RBMS110098.104ENSEASG00005023132RBMS110098.104Equus_asinus_asinus
ENSMPUG00000000539RBMS110098.104ENSECAG00000019894RBMS110098.104Equus_caballus
ENSMPUG00000000539RBMS165100.000ENSEEUG00000005628RBMS167100.000Erinaceus_europaeus
ENSMPUG00000000539RBMS19467.424ENSELUG00000019328RBMS19467.424Esox_lucius
ENSMPUG00000000539RBMS19164.156ENSELUG00000018923rbms1a9465.574Esox_lucius
ENSMPUG00000000539RBMS110094.550ENSFCAG00000012524RBMS110094.819Felis_catus
ENSMPUG00000000539RBMS18789.315ENSFALG00000004440RBMS19489.315Ficedula_albicollis
ENSMPUG00000000539RBMS110095.465ENSFDAG00000015692RBMS110098.731Fukomys_damarensis
ENSMPUG00000000539RBMS19370.408ENSFHEG00000000720RBMS18971.739Fundulus_heteroclitus
ENSMPUG00000000539RBMS19062.766ENSFHEG00000005662rbms1a7982.166Fundulus_heteroclitus
ENSMPUG00000000539RBMS18362.931ENSGMOG00000000525rbms1a9962.500Gadus_morhua
ENSMPUG00000000539RBMS19489.620ENSGALG00000011132RBMS19589.620Gallus_gallus
ENSMPUG00000000539RBMS19062.500ENSGAFG00000011633rbms1a9563.056Gambusia_affinis
ENSMPUG00000000539RBMS19470.250ENSGAFG00000007708RBMS18871.467Gambusia_affinis
ENSMPUG00000000539RBMS18772.900ENSGACG00000005671RBMS18973.098Gasterosteus_aculeatus
ENSMPUG00000000539RBMS19062.500ENSGACG00000015174rbms1a9363.889Gasterosteus_aculeatus
ENSMPUG00000000539RBMS110089.810ENSGAGG00000007866RBMS110089.810Gopherus_agassizii
ENSMPUG00000000539RBMS19298.446ENSGGOG00000001264RBMS110098.446Gorilla_gorilla
ENSMPUG00000000539RBMS19490.955ENSGGOG00000043756-9590.955Gorilla_gorilla
ENSMPUG00000000539RBMS18874.263ENSHBUG00000004516RBMS19275.204Haplochromis_burtoni
ENSMPUG00000000539RBMS18662.604ENSHBUG00000004802rbms1a9062.778Haplochromis_burtoni
ENSMPUG00000000539RBMS110094.749ENSHGLG00000010387RBMS110098.477Heterocephalus_glaber_female
ENSMPUG00000000539RBMS19498.477ENSHGLG00100014105RBMS110098.477Heterocephalus_glaber_male
ENSMPUG00000000539RBMS19371.429ENSHCOG00000016668RBMS19471.429Hippocampus_comes
ENSMPUG00000000539RBMS19061.170ENSHCOG00000020097rbms1a8961.667Hippocampus_comes
ENSMPUG00000000539RBMS110074.232ENSIPUG00000014677RBMS110074.232Ictalurus_punctatus
ENSMPUG00000000539RBMS18770.652ENSIPUG00000010131RBMS18870.652Ictalurus_punctatus
ENSMPUG00000000539RBMS110095.704ENSSTOG00000012501RBMS110099.239Ictidomys_tridecemlineatus
ENSMPUG00000000539RBMS110094.749ENSJJAG00000016543Rbms110098.446Jaculus_jaculus
ENSMPUG00000000539RBMS19061.273ENSKMAG00000011839-8961.773Kryptolebias_marmoratus
ENSMPUG00000000539RBMS19375.000ENSKMAG00000013911RBMS19475.000Kryptolebias_marmoratus
ENSMPUG00000000539RBMS18662.881ENSLBEG00000025962rbms1a8963.056Labrus_bergylta
ENSMPUG00000000539RBMS19374.235ENSLBEG00000005787RBMS19474.235Labrus_bergylta
ENSMPUG00000000539RBMS19477.805ENSLACG00000004324RBMS110075.258Latimeria_chalumnae
ENSMPUG00000000539RBMS19380.867ENSLOCG00000008622rbms1a9480.867Lepisosteus_oculatus
ENSMPUG00000000539RBMS19494.177ENSLAFG00000017217RBMS110094.177Loxodonta_africana
ENSMPUG00000000539RBMS110094.313ENSMFAG00000000274RBMS110094.560Macaca_fascicularis
ENSMPUG00000000539RBMS110094.313ENSMMUG00000016825RBMS19998.731Macaca_mulatta
ENSMPUG00000000539RBMS110094.313ENSMNEG00000039425RBMS110094.560Macaca_nemestrina
ENSMPUG00000000539RBMS19494.670ENSMLEG00000031517RBMS110094.301Mandrillus_leucophaeus
ENSMPUG00000000539RBMS18772.358ENSMAMG00000003159-9272.752Mastacembelus_armatus
ENSMPUG00000000539RBMS19060.372ENSMAMG00000005018rbms1a8960.833Mastacembelus_armatus
ENSMPUG00000000539RBMS18174.128ENSMZEG00005007313RBMS19174.344Maylandia_zebra
ENSMPUG00000000539RBMS18662.604ENSMZEG00005005661rbms1a9062.778Maylandia_zebra
ENSMPUG00000000539RBMS18788.587ENSMGAG00000011054RBMS110087.246Meleagris_gallopavo
ENSMPUG00000000539RBMS110094.033ENSMAUG00000008550Rbms110094.033Mesocricetus_auratus
ENSMPUG00000000539RBMS110093.839ENSMICG00000008325RBMS110098.187Microcebus_murinus
ENSMPUG00000000539RBMS110093.795ENSMOCG00000022617Rbms110096.891Microtus_ochrogaster
ENSMPUG00000000539RBMS19472.750ENSMMOG00000003707RBMS19672.750Mola_mola
ENSMPUG00000000539RBMS17565.924ENSMMOG00000018249rbms1a8166.242Mola_mola
ENSMPUG00000000539RBMS110091.169ENSMODG00000005250RBMS110091.169Monodelphis_domestica
ENSMPUG00000000539RBMS19062.234ENSMALG00000014235rbms1a8962.778Monopterus_albus
ENSMPUG00000000539RBMS18374.359ENSMALG00000015715-8972.877Monopterus_albus
ENSMPUG00000000539RBMS110093.556MGP_CAROLIEiJ_G0023586Rbms110097.150Mus_caroli
ENSMPUG00000000539RBMS110093.556ENSMUSG00000026970Rbms110097.150Mus_musculus
ENSMPUG00000000539RBMS110093.079MGP_PahariEiJ_G0025037Rbms110093.079Mus_pahari
ENSMPUG00000000539RBMS110093.795MGP_SPRETEiJ_G0024508Rbms110097.409Mus_spretus
ENSMPUG00000000539RBMS19994.033ENSMLUG00000008762RBMS19994.033Myotis_lucifugus
ENSMPUG00000000539RBMS110094.988ENSNGAG00000013636Rbms110094.988Nannospalax_galili
ENSMPUG00000000539RBMS17564.557ENSNBRG00000020217rbms1a8564.873Neolamprologus_brichardi
ENSMPUG00000000539RBMS18769.919ENSNBRG00000015151RBMS19470.109Neolamprologus_brichardi
ENSMPUG00000000539RBMS110094.076ENSNLEG00000001667RBMS19998.477Nomascus_leucogenys
ENSMPUG00000000539RBMS18076.036ENSMEUG00000000746RBMS110076.036Notamacropus_eugenii
ENSMPUG00000000539RBMS110087.441ENSOPRG00000012431RBMS110087.441Ochotona_princeps
ENSMPUG00000000539RBMS110095.227ENSODEG00000013934RBMS110098.446Octodon_degus
ENSMPUG00000000539RBMS18662.881ENSONIG00000003329rbms1a8863.056Oreochromis_niloticus
ENSMPUG00000000539RBMS19572.500ENSONIG00000008934RBMS19473.724Oreochromis_niloticus
ENSMPUG00000000539RBMS15157.676ENSOANG00000004477-9957.917Ornithorhynchus_anatinus
ENSMPUG00000000539RBMS19489.924ENSOANG00000006166RBMS19689.924Ornithorhynchus_anatinus
ENSMPUG00000000539RBMS19493.924ENSOCUG00000017365RBMS18993.924Oryctolagus_cuniculus
ENSMPUG00000000539RBMS19060.106ENSORLG00000003917rbms1a9060.556Oryzias_latipes
ENSMPUG00000000539RBMS18870.588ENSORLG00000016818RBMS18971.545Oryzias_latipes
ENSMPUG00000000539RBMS19059.840ENSORLG00020018663rbms1a9060.278Oryzias_latipes_hni
ENSMPUG00000000539RBMS18870.321ENSORLG00020022335RBMS18971.274Oryzias_latipes_hni
ENSMPUG00000000539RBMS19060.106ENSORLG00015016556rbms1a9060.665Oryzias_latipes_hsok
ENSMPUG00000000539RBMS18870.856ENSORLG00015018208RBMS18971.816Oryzias_latipes_hsok
ENSMPUG00000000539RBMS18970.557ENSOMEG00000002394RBMS19469.289Oryzias_melastigma
ENSMPUG00000000539RBMS18792.162ENSOGAG00000002900RBMS19492.162Otolemur_garnettii
ENSMPUG00000000539RBMS110094.988ENSOARG00000006870RBMS110097.938Ovis_aries
ENSMPUG00000000539RBMS19389.796ENSPPAG00000036520-9989.796Pan_paniscus
ENSMPUG00000000539RBMS19498.228ENSPPAG00000040083RBMS19998.228Pan_paniscus
ENSMPUG00000000539RBMS110094.550ENSPPRG00000005040RBMS110094.819Panthera_pardus
ENSMPUG00000000539RBMS19494.207ENSPTIG00000021240RBMS110094.819Panthera_tigris_altaica
ENSMPUG00000000539RBMS110094.076ENSPTRG00000052304RBMS19998.228Pan_troglodytes
ENSMPUG00000000539RBMS19590.299ENSPTRG00000039358-10090.050Pan_troglodytes
ENSMPUG00000000539RBMS110094.988ENSPANG00000001383RBMS110094.988Papio_anubis
ENSMPUG00000000539RBMS110075.059ENSPKIG00000001498rbms1a10074.118Paramormyrops_kingsleyae
ENSMPUG00000000539RBMS18775.000ENSPKIG00000012818rbms1a10072.684Paramormyrops_kingsleyae
ENSMPUG00000000539RBMS110090.931ENSPSIG00000010240RBMS110090.931Pelodiscus_sinensis
ENSMPUG00000000539RBMS18659.116ENSPMGG00000004341rbms1a9059.280Periophthalmus_magnuspinnatus
ENSMPUG00000000539RBMS18273.487ENSPMGG00000006310RBMS19565.489Periophthalmus_magnuspinnatus
ENSMPUG00000000539RBMS110094.749ENSPEMG00000009449Rbms110094.749Peromyscus_maniculatus_bairdii
ENSMPUG00000000539RBMS110091.169ENSPCIG00000018405RBMS110091.169Phascolarctos_cinereus
ENSMPUG00000000539RBMS19869.398ENSPFOG00000017483RBMS19869.398Poecilia_formosa
ENSMPUG00000000539RBMS19062.500ENSPFOG00000016116rbms1a8963.056Poecilia_formosa
ENSMPUG00000000539RBMS19062.500ENSPLAG00000013864rbms1a8963.056Poecilia_latipinna
ENSMPUG00000000539RBMS18771.739ENSPLAG00000000920RBMS18871.739Poecilia_latipinna
ENSMPUG00000000539RBMS19062.500ENSPMEG00000016185rbms1a8963.056Poecilia_mexicana
ENSMPUG00000000539RBMS19372.449ENSPMEG00000015838RBMS19472.449Poecilia_mexicana
ENSMPUG00000000539RBMS19372.194ENSPREG00000008146RBMS19472.194Poecilia_reticulata
ENSMPUG00000000539RBMS19062.500ENSPREG00000020161rbms1a8963.056Poecilia_reticulata
ENSMPUG00000000539RBMS110097.630ENSPPYG00000012879-10097.630Pongo_abelii
ENSMPUG00000000539RBMS110087.678ENSPCAG00000009673RBMS110087.678Procavia_capensis
ENSMPUG00000000539RBMS110094.076ENSPCOG00000027294RBMS110094.301Propithecus_coquereli
ENSMPUG00000000539RBMS18899.078ENSPVAG00000010429RBMS18799.078Pteropus_vampyrus
ENSMPUG00000000539RBMS19472.864ENSPNYG00000002643RBMS19473.724Pundamilia_nyererei
ENSMPUG00000000539RBMS18770.380ENSPNAG00000010225rbms1a8870.380Pygocentrus_nattereri
ENSMPUG00000000539RBMS110071.698ENSPNAG00000023479RBMS110072.877Pygocentrus_nattereri
ENSMPUG00000000539RBMS110093.795ENSRNOG00000008482Rbms19995.980Rattus_norvegicus
ENSMPUG00000000539RBMS110097.867ENSRBIG00000044262RBMS110097.867Rhinopithecus_bieti
ENSMPUG00000000539RBMS110098.104ENSRROG00000043108RBMS110098.104Rhinopithecus_roxellana
ENSMPUG00000000539RBMS19297.943ENSSBOG00000034705RBMS110097.943Saimiri_boliviensis_boliviensis
ENSMPUG00000000539RBMS110091.408ENSSHAG00000012271RBMS110091.408Sarcophilus_harrisii
ENSMPUG00000000539RBMS19976.667ENSSFOG00015022929rbms19976.667Scleropages_formosus
ENSMPUG00000000539RBMS18776.087ENSSFOG00015014493rbms1a9576.087Scleropages_formosus
ENSMPUG00000000539RBMS18772.900ENSSMAG00000012152RBMS18774.927Scophthalmus_maximus
ENSMPUG00000000539RBMS19455.725ENSSMAG00000012722rbms1a9562.500Scophthalmus_maximus
ENSMPUG00000000539RBMS19374.235ENSSDUG00000018803RBMS19474.235Seriola_dumerili
ENSMPUG00000000539RBMS19062.500ENSSDUG00000020602rbms1a9563.056Seriola_dumerili
ENSMPUG00000000539RBMS19373.980ENSSLDG00000016556RBMS19473.980Seriola_lalandi_dorsalis
ENSMPUG00000000539RBMS19062.500ENSSLDG00000009495rbms1a8963.056Seriola_lalandi_dorsalis
ENSMPUG00000000539RBMS18186.111ENSSARG00000011085RBMS18486.111Sorex_araneus
ENSMPUG00000000539RBMS18788.859ENSSPUG00000017163RBMS19488.859Sphenodon_punctatus
ENSMPUG00000000539RBMS19375.255ENSSPAG00000000059RBMS19475.255Stegastes_partitus
ENSMPUG00000000539RBMS18662.604ENSSPAG00000005371rbms1a8962.778Stegastes_partitus
ENSMPUG00000000539RBMS110098.568ENSSSCG00000015888RBMS110098.568Sus_scrofa
ENSMPUG00000000539RBMS110090.215ENSTGUG00000006606RBMS110090.215Taeniopygia_guttata
ENSMPUG00000000539RBMS18562.011ENSTRUG00000017155rbms1a8961.944Takifugu_rubripes
ENSMPUG00000000539RBMS18771.274ENSTRUG00000005466-9669.403Takifugu_rubripes
ENSMPUG00000000539RBMS19370.992ENSTNIG00000016496RBMS19772.826Tetraodon_nigroviridis
ENSMPUG00000000539RBMS18860.218ENSTNIG00000009477rbms1a9960.294Tetraodon_nigroviridis
ENSMPUG00000000539RBMS19483.375ENSTBEG00000016156RBMS110083.375Tupaia_belangeri
ENSMPUG00000000539RBMS19493.703ENSTTRG00000011058RBMS110093.703Tursiops_truncatus
ENSMPUG00000000539RBMS110098.807ENSUAMG00000022331RBMS110098.807Ursus_americanus
ENSMPUG00000000539RBMS19598.485ENSUMAG00000008605RBMS19998.485Ursus_maritimus
ENSMPUG00000000539RBMS19491.940ENSVPAG00000002716RBMS110091.940Vicugna_pacos
ENSMPUG00000000539RBMS110099.284ENSVVUG00000018682RBMS110099.482Vulpes_vulpes
ENSMPUG00000000539RBMS19479.198ENSXETG00000016204rbms110078.446Xenopus_tropicalis
ENSMPUG00000000539RBMS18771.739ENSXCOG00000000211RBMS19571.739Xiphophorus_couchianus
ENSMPUG00000000539RBMS19059.309ENSXCOG00000001659rbms1a8959.722Xiphophorus_couchianus
ENSMPUG00000000539RBMS19062.500ENSXMAG00000001802rbms1a8963.056Xiphophorus_maculatus
ENSMPUG00000000539RBMS19371.939ENSXMAG00000011405RBMS19471.939Xiphophorus_maculatus

Copyright © , Bioinformatics Center, Sun Yat-sen Memorial Hospital, Sun Yat-sen University, China. All Rights Reserved.

Any comment and suggestion, please contact us